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Added project skeleton

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tjakobi committed Feb 26, 2017
1 parent 95d3884 commit 33a7d73e0daa68b21bbc601f2ae9b9e4cb2e13a2
Showing with 132 additions and 0 deletions.
  1. +1 −0 DESCRIPTION.rst
  2. +5 −0 MANIFEST.in
  3. 0 README.rst
  4. +126 −0 setup.py
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# circtools - a versataile circular RNA toolbox
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include README.rst
include LICENSE
include DESCRIPTION.rst
recursive-include data *
recursive-include scripts *
No changes.
126 setup.py
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"""A setuptools based setup module.
See:
https://packaging.python.org/en/latest/distributing.html
https://github.com/pypa/sampleproject
"""
# Always prefer setuptools over distutils
from codecs import open
from os import path
from setuptools import setup
here = path.abspath(path.dirname(__file__))
# Get the long description from the relevant file
with open(path.join(here, 'DESCRIPTION.rst'), encoding='utf-8') as f:
long_description = f.read()
setup(
name='circtools',
# Versions should comply with PEP440. For a discussion on single-sourcing
# the version across setup.py and the project code, see
# https://packaging.python.org/en/latest/single_source_version.html
version='0.0.1',
description='circtools - a circular RNA toolbox',
long_description=long_description,
# The project's main homepage.
url='https://github.com/dieterich-lab/FUCHS',
# Author details
author='Tobias Jakobi',
author_email='Tobias.Jakobi@med.Uni-Heidelberg.DE',
# Choose your license
license='GNU General Public License (GPL)',
# See https://pypi.python.org/pypi?%3Aaction=list_classifiers
classifiers=[
# How mature is this project? Common values are
# Development Status :: 1 - Planning
# Development Status :: 2 - Pre-Alpha
# Development Status :: 3 - Alpha
# Development Status :: 4 - Beta
# Development Status :: 5 - Production/Stable
# Development Status :: 6 - Mature
# Development Status :: 7 - Inactive
'Development Status :: 3 - Alpha',
# Indicate who your project is intended for
'Intended Audience :: Researchers',
'Topic :: Software Development :: Build Tools',
# Pick your license as you wish (should match "license" above)
'License :: GNU General Public License (GPL) 3.0',
# Specify the Python versions you support here. In particular, ensure
# that you indicate whether you support Python 2, Python 3 or both.
# 'Programming Language :: Python :: 2',
# 'Programming Language :: Python :: 2.6',
# 'Programming Language :: Python :: 2.7',
# 'Programming Language :: Python :: 3',
# 'Programming Language :: Python :: 3.2',
# 'Programming Language :: Python :: 3.3',
'Programming Language :: Python :: 3.4',
],
# What does your project relate to?
keywords='circular RNA bioinformatics',
# You can just specify the packages manually here if your project is
# simple. Or you can use find_packages().
packages=['circtools'],
# List run-time dependencies here. These will be installed by pip when
# your project is installed. For an analysis of "install_requires" vs pip's
# requirements files see:
# https://packaging.python.org/en/latest/requirements.html
install_requires=[
'pybedtools>=0.7.8',
],
# List additional groups of dependencies here (e.g. development
# dependencies). You can install these using the following syntax,
# for example:
# $ pip install -e .[dev,test]
# extras_require={
# 'dev': ['check-manifest'],
# 'test': ['coverage'],
# },
# If there are data files included in your packages that need to be
# installed, specify them here. If using Python 2.6 or less, then these
# have to be included in MANIFEST.in as well.
package_data={
'circtools': ['data/*'],
'circtools': ['scripts/*'],
},
# Although 'package_data' is the preferred approach, in some case you may
# need to place data files outside of your packages. See:
# http://docs.python.org/3.4/distutils/setupscript.html#installing-additional-files # noqa
# In this case, 'data_file' will be installed into '<sys.prefix>/my_data'
# data_files=[('my_data', ['data/data_file'])],
# To provide executable scripts, use entry points in preference to the
# "scripts" keyword. Entry points provide cross-platform support and allow
# pip to create the appropriate form of executable for the target platform.
zip_safe=False,
entry_points={
'console_scripts': [
'circtools=circtools:main'
],
},
scripts=[
'scripts/circtools',
]
)

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