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@skoudoro I got the masking working in the
Here are the results: the middle blob is moved while the outer 8 blobs remain in place. Aligning without a mask doesn't find the translation of the middle blob, but using a mask to focus the optimization on the central region (colored square) does find that translation.
I next need to put together a proper test for it (maybe the example above can be the test case).
I was pretty aggressive about moving code around in
I'm also interested in benchmarking the timings -- i'm not sure how much (if any) speed benefit will come from masking.