From cfd1732c71c0f1a83cb1d551eb29d803c819b364 Mon Sep 17 00:00:00 2001 From: Dave Knoester Date: Mon, 11 Jun 2012 11:46:41 -0400 Subject: [PATCH] Added license. --- COPYING | 674 ++++++++++++++++++ README.md | 7 +- libea/include/ea/algorithm.h | 26 +- libea/include/ea/analysis.h | 20 + libea/include/ea/analysis/epistasis.h | 20 + .../ea/analysis/girvan_newman_clustering.h | 20 + libea/include/ea/analysis/graph.h | 20 + libea/include/ea/analysis/individual.h | 20 + libea/include/ea/analysis/information.h | 20 + libea/include/ea/analysis/landscape.h | 20 + libea/include/ea/analysis/line_of_descent.h | 20 + libea/include/ea/analysis/modularity.h | 20 + libea/include/ea/analysis/population.h | 20 + libea/include/ea/analysis/tool.h | 20 + .../ea/artificial_life/artificial_life.h | 24 +- .../include/ea/artificial_life/environment.h | 24 +- libea/include/ea/artificial_life/hardware.h | 22 +- .../include/ea/artificial_life/instructions.h | 20 + libea/include/ea/artificial_life/isa.h | 20 + libea/include/ea/artificial_life/organism.h | 20 + .../include/ea/artificial_life/replication.h | 20 + libea/include/ea/artificial_life/schedulers.h | 20 + .../include/ea/artificial_life/task_library.h | 20 + libea/include/ea/artificial_life/topology.h | 20 + libea/include/ea/attributes.h | 19 + libea/include/ea/checkpoint.h | 19 + libea/include/ea/circular_vector.h | 19 + libea/include/ea/cmdline_interface.h | 19 + libea/include/ea/comparators.h | 19 + libea/include/ea/concepts.h | 19 + libea/include/ea/datafile.h | 19 + .../include/ea/datafiles/generation_fitness.h | 19 + libea/include/ea/events.h | 19 + libea/include/ea/evolutionary_algorithm.h | 19 + libea/include/ea/exceptions.h | 19 + libea/include/ea/fitness_function.h | 19 + libea/include/ea/fitness_functions/all_ones.h | 19 + libea/include/ea/fitness_functions/direct.h | 19 + libea/include/ea/fitness_functions/nk.h | 19 + libea/include/ea/generational_model.h | 19 + .../generational_models/death_birth_process.h | 19 + libea/include/ea/generational_models/nsga2.h | 19 + .../ea/generational_models/synchronous.h | 19 + libea/include/ea/generators.h | 19 + libea/include/ea/individual.h | 19 + libea/include/ea/initialization.h | 19 + libea/include/ea/interface.h | 19 + libea/include/ea/landscape.h | 19 + libea/include/ea/line_of_descent.h | 19 + libea/include/ea/meta_data.h | 19 + libea/include/ea/mutation.h | 19 + libea/include/ea/novelty_search.h | 19 + libea/include/ea/population.h | 19 + libea/include/ea/recombination.h | 19 + .../ea/representations/circular_genome.h | 19 + .../ea/representations/numeric_vector.h | 19 + libea/include/ea/rng.h | 19 + libea/include/ea/selection/elitism.h | 19 + libea/include/ea/selection/proportional.h | 19 + libea/include/ea/selection/random.h | 19 + libea/include/ea/selection/tournament.h | 19 + libea/include/ea/selection/truncation.h | 19 + libea/src/main.cpp | 19 + libea/src/runner.cpp | 19 + libea/test/test.cpp | 19 + libea/test/test.h | 19 + libea/test/test_analysis.cpp | 19 + libea/test/test_checkpoint.cpp | 19 + libea/test/test_ealife.cpp | 19 + libea/test/test_generational.cpp | 19 + libea/test/test_meta_data.cpp | 19 + libea/test/test_recombination.cpp | 19 + libea/test/test_rng.cpp | 19 + libea/test/test_selection.cpp | 19 + libfn/cuda/include/fn/hmm/gpu_network.h | 19 + libfn/cuda/include/fn/hmm/gpu_update.h | 19 + libfn/cuda/src/gpu_network.cpp | 19 + libfn/cuda/test/test.cpp | 19 + libfn/cuda/test/test.h | 19 + libfn/examples/maze/src/main.cpp | 19 + libfn/include/fn/hmm/deterministic_node.h | 19 + libfn/include/fn/hmm/graph.h | 19 + libfn/include/fn/hmm/hmm.h | 19 + libfn/include/fn/hmm/hmm_evolution.h | 19 + libfn/include/fn/hmm/hmm_header.h | 19 + libfn/include/fn/hmm/hmm_instruments.h | 19 + libfn/include/fn/hmm/hmm_network.h | 19 + libfn/include/fn/hmm/hmm_node.h | 19 + libfn/include/fn/hmm/output.h | 19 + libfn/include/fn/hmm/primitive.h | 19 + libfn/include/fn/hmm/probabilistic_node.h | 19 + libfn/include/fn/nn/activation.h | 19 + libfn/include/fn/nn/back_propagation.h | 19 + libfn/include/fn/nn/ctrnn.h | 19 + libfn/include/fn/nn/feed_forward.h | 19 + libfn/include/fn/nn/layout.h | 19 + libfn/include/fn/nn/neural_network.h | 19 + libfn/include/fn/nn/neuron.h | 19 + libfn/include/fn/nn/recurrent.h | 19 + libfn/include/fn/nn/sigmoid.h | 19 + libfn/src/hmm/deterministic_node.cpp | 19 + libfn/src/hmm/graph.cpp | 21 +- libfn/src/hmm/hmm.cpp | 19 + libfn/src/hmm/hmm_network.cpp | 19 + libfn/src/hmm/hmm_node.cpp | 19 + libfn/src/hmm/probabilistic_node.cpp | 19 + libfn/src/nn/nn.cpp | 19 + libfn/test/test.cpp | 19 + libfn/test/test.h | 19 + libfn/test/test_cat.cpp | 21 +- libfn/test/test_network.cpp | 19 + libfn/test/test_nodes.cpp | 19 + libfn/test/test_update.cpp | 19 + 113 files changed, 2821 insertions(+), 11 deletions(-) create mode 100644 COPYING diff --git a/COPYING b/COPYING new file mode 100644 index 0000000..20d40b6 --- /dev/null +++ b/COPYING @@ -0,0 +1,674 @@ + GNU 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Use with the GNU Affero General Public License. + + Notwithstanding any other provision of this License, you have +permission to link or combine any covered work with a work licensed +under version 3 of the GNU Affero General Public License into a single +combined work, and to convey the resulting work. The terms of this +License will continue to apply to the part which is the covered work, +but the special requirements of the GNU Affero General Public License, +section 13, concerning interaction through a network will apply to the +combination as such. + + 14. Revised Versions of this License. + + The Free Software Foundation may publish revised and/or new versions of +the GNU General Public License from time to time. Such new versions will +be similar in spirit to the present version, but may differ in detail to +address new problems or concerns. + + Each version is given a distinguishing version number. If the +Program specifies that a certain numbered version of the GNU General +Public License "or any later version" applies to it, you have the +option of following the terms and conditions either of that numbered +version or of any later version published by the Free Software +Foundation. If the Program does not specify a version number of the +GNU General Public License, you may choose any version ever published +by the Free Software Foundation. + + If the Program specifies that a proxy can decide which future +versions of the GNU General Public License can be used, that proxy's +public statement of acceptance of a version permanently authorizes you +to choose that version for the Program. + + Later license versions may give you additional or different +permissions. However, no additional obligations are imposed on any +author or copyright holder as a result of your choosing to follow a +later version. + + 15. Disclaimer of Warranty. + + THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY +APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT +HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY +OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, +THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR +PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM +IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF +ALL NECESSARY SERVICING, REPAIR OR CORRECTION. + + 16. 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Interpretation of Sections 15 and 16. + + If the disclaimer of warranty and limitation of liability provided +above cannot be given local legal effect according to their terms, +reviewing courts shall apply local law that most closely approximates +an absolute waiver of all civil liability in connection with the +Program, unless a warranty or assumption of liability accompanies a +copy of the Program in return for a fee. + + END OF TERMS AND CONDITIONS + + How to Apply These Terms to Your New Programs + + If you develop a new program, and you want it to be of the greatest +possible use to the public, the best way to achieve this is to make it +free software which everyone can redistribute and change under these terms. + + To do so, attach the following notices to the program. It is safest +to attach them to the start of each source file to most effectively +state the exclusion of warranty; and each file should have at least +the "copyright" line and a pointer to where the full notice is found. + + + Copyright (C) + + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License, or + (at your option) any later version. + + This program is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + + You should have received a copy of the GNU General Public License + along with this program. If not, see . + +Also add information on how to contact you by electronic and paper mail. + + If the program does terminal interaction, make it output a short +notice like this when it starts in an interactive mode: + + Copyright (C) + This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'. + This is free software, and you are welcome to redistribute it + under certain conditions; type `show c' for details. + +The hypothetical commands `show w' and `show c' should show the appropriate +parts of the General Public License. Of course, your program's commands +might be different; for a GUI interface, you would use an "about box". + + You should also get your employer (if you work as a programmer) or school, +if any, to sign a "copyright disclaimer" for the program, if necessary. +For more information on this, and how to apply and follow the GNU GPL, see +. + + The GNU General Public License does not permit incorporating your program +into proprietary programs. If your program is a subroutine library, you +may consider it more useful to permit linking proprietary applications with +the library. If this is what you want to do, use the GNU Lesser General +Public License instead of this License. But first, please read +. \ No newline at end of file diff --git a/README.md b/README.md index 7baad16..219965c 100644 --- a/README.md +++ b/README.md @@ -1,4 +1,9 @@ ealib ===== -Evolutionary Algorithms Library \ No newline at end of file +Evolutionary Algorithms Library + + + +Contributors: +David B. Knoester, Heather J. Goldsby, Randy Olson. diff --git a/libea/include/ea/algorithm.h b/libea/include/ea/algorithm.h index 4deaee2..3457434 100644 --- a/libea/include/ea/algorithm.h +++ b/libea/include/ea/algorithm.h @@ -1,3 +1,23 @@ +/* algorithm.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ALGORITHM_H_ #define _EA_ALGORITHM_H_ @@ -23,7 +43,7 @@ namespace ea { for(std::size_t i=0; first != last; ++first, ++i) *first = i; } - + //! x == [-x_range,x_range], normalized to [-output_range,output_range] template T normalize(T x, T x_range, T output_range) { @@ -36,7 +56,7 @@ namespace ea { T clip(T value, T min, T max) { return std::max(min, std::min(value, max)); } - + //! Convert a sequence of values to a single string with the given separator. template std::string vcat(ForwardIterator f, ForwardIterator l, const char* sep=" ") { @@ -103,7 +123,7 @@ namespace ea { } return sum / static_cast(c); } - + } // algorithm } // ea diff --git a/libea/include/ea/analysis.h b/libea/include/ea/analysis.h index 18fb4ab..240ea90 100644 --- a/libea/include/ea/analysis.h +++ b/libea/include/ea/analysis.h @@ -1,3 +1,23 @@ +/* analysis.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_H_ #define _EA_ANALYSIS_H_ diff --git a/libea/include/ea/analysis/epistasis.h b/libea/include/ea/analysis/epistasis.h index cdbdbb1..beb5d1a 100644 --- a/libea/include/ea/analysis/epistasis.h +++ b/libea/include/ea/analysis/epistasis.h @@ -1,3 +1,23 @@ +/* epistasis.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_EPISTASIS_H_ #define _EA_ANALYSIS_EPISTASIS_H_ diff --git a/libea/include/ea/analysis/girvan_newman_clustering.h b/libea/include/ea/analysis/girvan_newman_clustering.h index 46a32bc..33de344 100644 --- a/libea/include/ea/analysis/girvan_newman_clustering.h +++ b/libea/include/ea/analysis/girvan_newman_clustering.h @@ -1,3 +1,23 @@ +/* girvan_newman_clustering.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_GIRVAN_NEWMAN_CLUSTERING_H_ #define _EA_ANALYSIS_GIRVAN_NEWMAN_CLUSTERING_H_ diff --git a/libea/include/ea/analysis/graph.h b/libea/include/ea/analysis/graph.h index 22d697b..e1ddd81 100644 --- a/libea/include/ea/analysis/graph.h +++ b/libea/include/ea/analysis/graph.h @@ -1,3 +1,23 @@ +/* graph.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_GRAPH_H_ #define _EA_ANALYSIS_GRAPH_H_ diff --git a/libea/include/ea/analysis/individual.h b/libea/include/ea/analysis/individual.h index 4491739..dfddf03 100644 --- a/libea/include/ea/analysis/individual.h +++ b/libea/include/ea/analysis/individual.h @@ -1,3 +1,23 @@ +/* individual.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_MAX_FIT_INDIVIDUAL_H_ #define _EA_ANALYSIS_MAX_FIT_INDIVIDUAL_H_ diff --git a/libea/include/ea/analysis/information.h b/libea/include/ea/analysis/information.h index 3ff1b62..a463139 100644 --- a/libea/include/ea/analysis/information.h +++ b/libea/include/ea/analysis/information.h @@ -1,3 +1,23 @@ +/* information.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_INFORMATION_H_ #define _EA_ANALYSIS_INFORMATION_H_ diff --git a/libea/include/ea/analysis/landscape.h b/libea/include/ea/analysis/landscape.h index f930937..5572b44 100644 --- a/libea/include/ea/analysis/landscape.h +++ b/libea/include/ea/analysis/landscape.h @@ -1,3 +1,23 @@ +/* landscape.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_LANDSCAPE_H_ #define _EA_ANALYSIS_LANDSCAPE_H_ diff --git a/libea/include/ea/analysis/line_of_descent.h b/libea/include/ea/analysis/line_of_descent.h index 94e7d50..230beba 100644 --- a/libea/include/ea/analysis/line_of_descent.h +++ b/libea/include/ea/analysis/line_of_descent.h @@ -1,3 +1,23 @@ +/* line_of_descent.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_LINE_OF_DESCENT_H_ #define _EA_ANALYSIS_LINE_OF_DESCENT_H_ diff --git a/libea/include/ea/analysis/modularity.h b/libea/include/ea/analysis/modularity.h index d6c7b9f..0b8edfa 100644 --- a/libea/include/ea/analysis/modularity.h +++ b/libea/include/ea/analysis/modularity.h @@ -1,3 +1,23 @@ +/* modularity.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_MODULARITY_H_ #define _EA_ANALYSIS_MODULARITY_H_ diff --git a/libea/include/ea/analysis/population.h b/libea/include/ea/analysis/population.h index 5b451bd..abcff04 100644 --- a/libea/include/ea/analysis/population.h +++ b/libea/include/ea/analysis/population.h @@ -1,3 +1,23 @@ +/* population.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_POPULATION_H_ #define _EA_ANALYSIS_POPULATION_H_ diff --git a/libea/include/ea/analysis/tool.h b/libea/include/ea/analysis/tool.h index 5876e9a..e0c3e29 100644 --- a/libea/include/ea/analysis/tool.h +++ b/libea/include/ea/analysis/tool.h @@ -1,3 +1,23 @@ +/* tool.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ANALYSIS_TOOL_H_ #define _EA_ANALYSIS_TOOL_H_ diff --git a/libea/include/ea/artificial_life/artificial_life.h b/libea/include/ea/artificial_life/artificial_life.h index 5e9bb8b..5b9217d 100644 --- a/libea/include/ea/artificial_life/artificial_life.h +++ b/libea/include/ea/artificial_life/artificial_life.h @@ -1,5 +1,25 @@ -#ifndef _EA_ARTIFICIAL_LIFE_H_ -#define _EA_ARTIFICIAL_LIFE_H_ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + +#ifndef _EA_ARTIFICIAL_LIFE_ARTIFICIAL_LIFE_H_ +#define _EA_ARTIFICIAL_LIFE_ARTIFICIAL_LIFE_H_ #include #include diff --git a/libea/include/ea/artificial_life/environment.h b/libea/include/ea/artificial_life/environment.h index 77acb4e..dacd3d5 100644 --- a/libea/include/ea/artificial_life/environment.h +++ b/libea/include/ea/artificial_life/environment.h @@ -1,5 +1,25 @@ -#ifndef _EA_ENVIRONMENT_H_ -#define _EA_ENVIRONMENT_H_ +/* artificial_life/environment.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + +#ifndef _EA_ARTIFICIAL_LIFE_ENVIRONMENT_H_ +#define _EA_ARTIFICIAL_LIFE_ENVIRONMENT_H_ #include diff --git a/libea/include/ea/artificial_life/hardware.h b/libea/include/ea/artificial_life/hardware.h index 1c618a6..b608eb0 100644 --- a/libea/include/ea/artificial_life/hardware.h +++ b/libea/include/ea/artificial_life/hardware.h @@ -1,4 +1,24 @@ -#ifndef _EA_HARDWARE_H_ +/* artificial_life/hardware.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + +#ifndef _EA_ARTIFICIAL_LIFE_HARDWARE_H_ #define _EA_HARDWARE_H_ #include diff --git a/libea/include/ea/artificial_life/instructions.h b/libea/include/ea/artificial_life/instructions.h index 7ea8eb5..6c32ac7 100644 --- a/libea/include/ea/artificial_life/instructions.h +++ b/libea/include/ea/artificial_life/instructions.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_HARDWARE_AVIDA_INSTRUCTIONS_H_ #define _EA_HARDWARE_AVIDA_INSTRUCTIONS_H_ diff --git a/libea/include/ea/artificial_life/isa.h b/libea/include/ea/artificial_life/isa.h index 4dde7a1..66acec9 100644 --- a/libea/include/ea/artificial_life/isa.h +++ b/libea/include/ea/artificial_life/isa.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_HARDWARE_ISA_H_ #define _EA_HARDWARE_ISA_H_ diff --git a/libea/include/ea/artificial_life/organism.h b/libea/include/ea/artificial_life/organism.h index a8757e1..f797250 100644 --- a/libea/include/ea/artificial_life/organism.h +++ b/libea/include/ea/artificial_life/organism.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ORGANISM_H_ #define _EA_ORGANISM_H_ diff --git a/libea/include/ea/artificial_life/replication.h b/libea/include/ea/artificial_life/replication.h index 6db8744..e70ba3a 100644 --- a/libea/include/ea/artificial_life/replication.h +++ b/libea/include/ea/artificial_life/replication.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_REPLICATION_H_ #define _EA_REPLICATION_H_ diff --git a/libea/include/ea/artificial_life/schedulers.h b/libea/include/ea/artificial_life/schedulers.h index fdb2551..04e9219 100644 --- a/libea/include/ea/artificial_life/schedulers.h +++ b/libea/include/ea/artificial_life/schedulers.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_SCHEDULERS_H_ #define _EA_SCHEDULERS_H_ diff --git a/libea/include/ea/artificial_life/task_library.h b/libea/include/ea/artificial_life/task_library.h index 14a45e0..12d4944 100644 --- a/libea/include/ea/artificial_life/task_library.h +++ b/libea/include/ea/artificial_life/task_library.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_ARTIFICIAL_LIFE_TASK_LIBRARY_H_ #define _EA_ARTIFICIAL_LIFE_TASK_LIBRARY_H_ diff --git a/libea/include/ea/artificial_life/topology.h b/libea/include/ea/artificial_life/topology.h index 3ae21c0..b72afdc 100644 --- a/libea/include/ea/artificial_life/topology.h +++ b/libea/include/ea/artificial_life/topology.h @@ -1,3 +1,23 @@ +/* artificial_life/artificial_life.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ + #ifndef _EA_TOPOLOGY_H_ #define _EA_TOPOLOGY_H_ diff --git a/libea/include/ea/attributes.h b/libea/include/ea/attributes.h index cb4203c..efcd627 100644 --- a/libea/include/ea/attributes.h +++ b/libea/include/ea/attributes.h @@ -1,3 +1,22 @@ +/* attributes.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_ATTRIBUTES_H_ #define _EA_ATTRIBUTES_H_ diff --git a/libea/include/ea/checkpoint.h b/libea/include/ea/checkpoint.h index 82f9034..af429b0 100644 --- a/libea/include/ea/checkpoint.h +++ b/libea/include/ea/checkpoint.h @@ -1,3 +1,22 @@ +/* checkpoint.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_CHECKPOINT_H_ #define _EA_CHECKPOINT_H_ diff --git a/libea/include/ea/circular_vector.h b/libea/include/ea/circular_vector.h index b78b8ae..ac5f2c1 100644 --- a/libea/include/ea/circular_vector.h +++ b/libea/include/ea/circular_vector.h @@ -1,3 +1,22 @@ +/* circular_vector.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_CIRCULAR_VECTOR_H_ #define _EA_CIRCULAR_VECTOR_H_ diff --git a/libea/include/ea/cmdline_interface.h b/libea/include/ea/cmdline_interface.h index b926a99..885f53d 100644 --- a/libea/include/ea/cmdline_interface.h +++ b/libea/include/ea/cmdline_interface.h @@ -1,3 +1,22 @@ +/* cmdline_interface.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_CMDLINE_INTERFACE_H_ #define _EA_CMDLINE_INTERFACE_H_ diff --git a/libea/include/ea/comparators.h b/libea/include/ea/comparators.h index 76f4152..7549543 100644 --- a/libea/include/ea/comparators.h +++ b/libea/include/ea/comparators.h @@ -1,3 +1,22 @@ +/* comparators.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_COMPARATORS_H_ #define _EA_COMPARATORS_H_ diff --git a/libea/include/ea/concepts.h b/libea/include/ea/concepts.h index 2150026..8158a39 100644 --- a/libea/include/ea/concepts.h +++ b/libea/include/ea/concepts.h @@ -1,3 +1,22 @@ +/* concepts.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_CONCEPTS_H_ #define _EA_CONCEPTS_H_ diff --git a/libea/include/ea/datafile.h b/libea/include/ea/datafile.h index b4b6a65..bff9be6 100644 --- a/libea/include/ea/datafile.h +++ b/libea/include/ea/datafile.h @@ -1,3 +1,22 @@ +/* datafile.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_DATAFILE_H_ #define _EA_DATAFILE_H_ diff --git a/libea/include/ea/datafiles/generation_fitness.h b/libea/include/ea/datafiles/generation_fitness.h index 8d5d6d7..b04e77f 100644 --- a/libea/include/ea/datafiles/generation_fitness.h +++ b/libea/include/ea/datafiles/generation_fitness.h @@ -1,3 +1,22 @@ +/* generation_fitness.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_DATAFILES_GENERATION_FITNESS_H_ #define _EA_DATAFILES_GENERATION_FITNESS_H_ diff --git a/libea/include/ea/events.h b/libea/include/ea/events.h index 3f61170..baeeaca 100644 --- a/libea/include/ea/events.h +++ b/libea/include/ea/events.h @@ -1,3 +1,22 @@ +/* events.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_EVENTS_H_ #define _EA_EVENTS_H_ diff --git a/libea/include/ea/evolutionary_algorithm.h b/libea/include/ea/evolutionary_algorithm.h index f51be61..6799557 100644 --- a/libea/include/ea/evolutionary_algorithm.h +++ b/libea/include/ea/evolutionary_algorithm.h @@ -1,3 +1,22 @@ +/* evolutionary_algorithm.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_EVOLUTIONARY_ALGORITHM_H_ #define _EA_EVOLUTIONARY_ALGORITHM_H_ diff --git a/libea/include/ea/exceptions.h b/libea/include/ea/exceptions.h index c8bb793..01fc6bb 100644 --- a/libea/include/ea/exceptions.h +++ b/libea/include/ea/exceptions.h @@ -1,3 +1,22 @@ +/* exceptions.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_EXCEPTIONS_H_ #define _EA_EXCEPTIONS_H_ diff --git a/libea/include/ea/fitness_function.h b/libea/include/ea/fitness_function.h index 6dc94c5..b2acfb5 100644 --- a/libea/include/ea/fitness_function.h +++ b/libea/include/ea/fitness_function.h @@ -1,3 +1,22 @@ +/* fitness_function.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_FITNESS_FUNCTION_H_ #define _EA_FITNESS_FUNCTION_H_ diff --git a/libea/include/ea/fitness_functions/all_ones.h b/libea/include/ea/fitness_functions/all_ones.h index 0e5ef5d..48ee773 100644 --- a/libea/include/ea/fitness_functions/all_ones.h +++ b/libea/include/ea/fitness_functions/all_ones.h @@ -1,3 +1,22 @@ +/* all_ones.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_FITNESS_FUNCTIONS_ALL_ONES_H_ #define _EA_FITNESS_FUNCTIONS_ALL_ONES_H_ diff --git a/libea/include/ea/fitness_functions/direct.h b/libea/include/ea/fitness_functions/direct.h index 7c21d53..ba0de6a 100644 --- a/libea/include/ea/fitness_functions/direct.h +++ b/libea/include/ea/fitness_functions/direct.h @@ -1,3 +1,22 @@ +/* direct.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_FITNESS_FUNCTIONS_DIRECT_H_ #define _EA_FITNESS_FUNCTIONS_DIRECT_H_ diff --git a/libea/include/ea/fitness_functions/nk.h b/libea/include/ea/fitness_functions/nk.h index b3fc292..daaba23 100644 --- a/libea/include/ea/fitness_functions/nk.h +++ b/libea/include/ea/fitness_functions/nk.h @@ -1,3 +1,22 @@ +/* nk.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_FITNESS_FUNCTIONS_NK_H_ #define _EA_FITNESS_FUNCTIONS_NK_H_ diff --git a/libea/include/ea/generational_model.h b/libea/include/ea/generational_model.h index dd006b2..e2e206e 100644 --- a/libea/include/ea/generational_model.h +++ b/libea/include/ea/generational_model.h @@ -1,3 +1,22 @@ +/* generational_model.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_GENERATIONAL_MODEL_H_ #define _EA_GENERATIONAL_MODEL_H_ diff --git a/libea/include/ea/generational_models/death_birth_process.h b/libea/include/ea/generational_models/death_birth_process.h index e6fa41d..99d33c6 100644 --- a/libea/include/ea/generational_models/death_birth_process.h +++ b/libea/include/ea/generational_models/death_birth_process.h @@ -1,3 +1,22 @@ +/* death_birth_process.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_GENERATIONAL_MODELS_DEATH_GROWTH_PROCESS_H_ #define _EA_GENERATIONAL_MODELS_DEATH_GROWTH_PROCESS_H_ diff --git a/libea/include/ea/generational_models/nsga2.h b/libea/include/ea/generational_models/nsga2.h index 03706ec..49ad9ab 100644 --- a/libea/include/ea/generational_models/nsga2.h +++ b/libea/include/ea/generational_models/nsga2.h @@ -1,3 +1,22 @@ +/* nsga2.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_GENERATIONAL_MODELS_NSGA2_H_ #define _EA_GENERATIONAL_MODELS_NSGA2_H_ diff --git a/libea/include/ea/generational_models/synchronous.h b/libea/include/ea/generational_models/synchronous.h index 178d11e..d8a1ebe 100644 --- a/libea/include/ea/generational_models/synchronous.h +++ b/libea/include/ea/generational_models/synchronous.h @@ -1,3 +1,22 @@ +/* synchronous.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_GENERATIONAL_MODELS_SYNCHRONOUS_H_ #define _EA_GENERATIONAL_MODELS_SYNCHRONOUS_H_ diff --git a/libea/include/ea/generators.h b/libea/include/ea/generators.h index 4fa25be..091ae53 100644 --- a/libea/include/ea/generators.h +++ b/libea/include/ea/generators.h @@ -1,3 +1,22 @@ +/* generators.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_GENERATORS_H_ #define _EA_GENERATORS_H_ diff --git a/libea/include/ea/individual.h b/libea/include/ea/individual.h index 8cedd88..ed2a970 100644 --- a/libea/include/ea/individual.h +++ b/libea/include/ea/individual.h @@ -1,3 +1,22 @@ +/* individual.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_INDIVIDUAL_H_ #define _EA_INDIVIDUAL_H_ diff --git a/libea/include/ea/initialization.h b/libea/include/ea/initialization.h index 8708ac2..16c1bc9 100644 --- a/libea/include/ea/initialization.h +++ b/libea/include/ea/initialization.h @@ -1,3 +1,22 @@ +/* initialization.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_INITIALIZATION_H_ #define _EA_INITIALIZATION_H_ diff --git a/libea/include/ea/interface.h b/libea/include/ea/interface.h index 814791a..396791c 100644 --- a/libea/include/ea/interface.h +++ b/libea/include/ea/interface.h @@ -1,3 +1,22 @@ +/* interface.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_INTERFACE_H_ #define _EA_INTERFACE_H_ diff --git a/libea/include/ea/landscape.h b/libea/include/ea/landscape.h index dfbeebf..d954b2b 100644 --- a/libea/include/ea/landscape.h +++ b/libea/include/ea/landscape.h @@ -1,3 +1,22 @@ +/* landscape.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_LANDSCAPE_H_ #define _EA_LANDSCAPE_H_ diff --git a/libea/include/ea/line_of_descent.h b/libea/include/ea/line_of_descent.h index c9f261f..e1ebf79 100644 --- a/libea/include/ea/line_of_descent.h +++ b/libea/include/ea/line_of_descent.h @@ -1,3 +1,22 @@ +/* line_of_descent.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_LINE_OF_DESCENT_H_ #define _EA_LINE_OF_DESCENT_H_ diff --git a/libea/include/ea/meta_data.h b/libea/include/ea/meta_data.h index 13f2d06..e98a13d 100644 --- a/libea/include/ea/meta_data.h +++ b/libea/include/ea/meta_data.h @@ -1,3 +1,22 @@ +/* meta_data.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_META_DATA_H_ #define _EA_META_DATA_H_ diff --git a/libea/include/ea/mutation.h b/libea/include/ea/mutation.h index aef2d12..564273d 100644 --- a/libea/include/ea/mutation.h +++ b/libea/include/ea/mutation.h @@ -1,3 +1,22 @@ +/* mutation.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_MUTATION_H_ #define _EA_MUTATION_H_ diff --git a/libea/include/ea/novelty_search.h b/libea/include/ea/novelty_search.h index 6f3dae1..23927cb 100644 --- a/libea/include/ea/novelty_search.h +++ b/libea/include/ea/novelty_search.h @@ -1,3 +1,22 @@ +/* novelty_search.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Randy Olson. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_NOVELTY_SEARCH_H_ #define _EA_NOVELTY_SEARCH_H_ diff --git a/libea/include/ea/population.h b/libea/include/ea/population.h index 2e590ab..4d35757 100644 --- a/libea/include/ea/population.h +++ b/libea/include/ea/population.h @@ -1,3 +1,22 @@ +/* population.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_POPULATION_H_ #define _EA_POPULATION_H_ diff --git a/libea/include/ea/recombination.h b/libea/include/ea/recombination.h index 622bf4c..8988744 100644 --- a/libea/include/ea/recombination.h +++ b/libea/include/ea/recombination.h @@ -1,3 +1,22 @@ +/* recombination.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_RECOMBINATION_H_ #define _EA_RECOMBINATION_H_ diff --git a/libea/include/ea/representations/circular_genome.h b/libea/include/ea/representations/circular_genome.h index 8adee31..d69a078 100644 --- a/libea/include/ea/representations/circular_genome.h +++ b/libea/include/ea/representations/circular_genome.h @@ -1,3 +1,22 @@ +/* circular_genome.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_REPRESENTATIONS_CIRCULAR_GENOME_H_ #define _EA_REPRESENTATIONS_CIRCULAR_GENOME_H_ diff --git a/libea/include/ea/representations/numeric_vector.h b/libea/include/ea/representations/numeric_vector.h index b5bb49b..4e02759 100644 --- a/libea/include/ea/representations/numeric_vector.h +++ b/libea/include/ea/representations/numeric_vector.h @@ -1,3 +1,22 @@ +/* numeric_vector.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_REPRESENTATIONS_NUMERIC_VECTOR_H_ #define _EA_REPRESENTATIONS_NUMERIC_VECTOR_H_ diff --git a/libea/include/ea/rng.h b/libea/include/ea/rng.h index f297948..b812aca 100644 --- a/libea/include/ea/rng.h +++ b/libea/include/ea/rng.h @@ -1,3 +1,22 @@ +/* rng.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_RNG_H_ #define _EA_RNG_H_ diff --git a/libea/include/ea/selection/elitism.h b/libea/include/ea/selection/elitism.h index e539517..8fd3b48 100644 --- a/libea/include/ea/selection/elitism.h +++ b/libea/include/ea/selection/elitism.h @@ -1,3 +1,22 @@ +/* elitism.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_SELECTION_ELITISM_H_ #define _EA_SELECTION_ELITISM_H_ diff --git a/libea/include/ea/selection/proportional.h b/libea/include/ea/selection/proportional.h index 2b35860..8976d76 100644 --- a/libea/include/ea/selection/proportional.h +++ b/libea/include/ea/selection/proportional.h @@ -1,3 +1,22 @@ +/* proportional.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_SELECTION_PROPORTIONAL_H_ #define _EA_SELECTION_PROPORTIONAL_H_ diff --git a/libea/include/ea/selection/random.h b/libea/include/ea/selection/random.h index a429d85..eb13cb8 100644 --- a/libea/include/ea/selection/random.h +++ b/libea/include/ea/selection/random.h @@ -1,3 +1,22 @@ +/* random.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_SELECTION_RANDOM_H_ #define _EA_SELECTION_RANDOM_H_ diff --git a/libea/include/ea/selection/tournament.h b/libea/include/ea/selection/tournament.h index c328338..b34a55a 100644 --- a/libea/include/ea/selection/tournament.h +++ b/libea/include/ea/selection/tournament.h @@ -1,3 +1,22 @@ +/* tournament.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_SELECTION_TOURNAMENT_H_ #define _EA_SELECTION_TOURNAMENT_H_ diff --git a/libea/include/ea/selection/truncation.h b/libea/include/ea/selection/truncation.h index 22aa695..a45d6bb 100644 --- a/libea/include/ea/selection/truncation.h +++ b/libea/include/ea/selection/truncation.h @@ -1,3 +1,22 @@ +/* truncation.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _EA_SELECTION_TRUNCATION_H_ #define _EA_SELECTION_TRUNCATION_H_ diff --git a/libea/src/main.cpp b/libea/src/main.cpp index 2c8e4ae..20ed8eb 100644 --- a/libea/src/main.cpp +++ b/libea/src/main.cpp @@ -1,3 +1,22 @@ +/* main.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libea/src/runner.cpp b/libea/src/runner.cpp index aa8e394..9c36e9e 100644 --- a/libea/src/runner.cpp +++ b/libea/src/runner.cpp @@ -1,3 +1,22 @@ +/* runner.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include ea::registrar* ea::registrar::_instance=0; diff --git a/libea/test/test.cpp b/libea/test/test.cpp index 3fe57f2..a8251dd 100644 --- a/libea/test/test.cpp +++ b/libea/test/test.cpp @@ -1,3 +1,22 @@ +/* test.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #define BOOST_TEST_DYN_LINK #define BOOST_TEST_MAIN #include "test.h" diff --git a/libea/test/test.h b/libea/test/test.h index eca3cee..6d0ec9f 100644 --- a/libea/test/test.h +++ b/libea/test/test.h @@ -1,3 +1,22 @@ +/* test.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _TEST_H_ #define _TEST_H_ diff --git a/libea/test/test_analysis.cpp b/libea/test/test_analysis.cpp index d851811..efbc2a8 100644 --- a/libea/test/test_analysis.cpp +++ b/libea/test/test_analysis.cpp @@ -1,3 +1,22 @@ +/* test_analysis.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" #include #include diff --git a/libea/test/test_checkpoint.cpp b/libea/test/test_checkpoint.cpp index 7b8df6e..d56236b 100644 --- a/libea/test/test_checkpoint.cpp +++ b/libea/test/test_checkpoint.cpp @@ -1,3 +1,22 @@ +/* test_checkpoint.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" /*! Test of EA checkpointing. diff --git a/libea/test/test_ealife.cpp b/libea/test/test_ealife.cpp index c4f8839..1f986ca 100644 --- a/libea/test/test_ealife.cpp +++ b/libea/test/test_ealife.cpp @@ -1,3 +1,22 @@ +/* test_ealife.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester, Heather J. Goldsby. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" #include diff --git a/libea/test/test_generational.cpp b/libea/test/test_generational.cpp index cf67df8..471c7f3 100644 --- a/libea/test/test_generational.cpp +++ b/libea/test/test_generational.cpp @@ -1,3 +1,22 @@ +/* test_generational.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" #include #include diff --git a/libea/test/test_meta_data.cpp b/libea/test/test_meta_data.cpp index 4d8b47c..be245aa 100644 --- a/libea/test/test_meta_data.cpp +++ b/libea/test/test_meta_data.cpp @@ -1,3 +1,22 @@ +/* test_meta_data.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" BOOST_AUTO_TEST_CASE(test_md) { diff --git a/libea/test/test_recombination.cpp b/libea/test/test_recombination.cpp index 7dd65be..ee94b99 100644 --- a/libea/test/test_recombination.cpp +++ b/libea/test/test_recombination.cpp @@ -1,3 +1,22 @@ +/* test_recombination.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" #include diff --git a/libea/test/test_rng.cpp b/libea/test/test_rng.cpp index a68f00f..440bcbf 100644 --- a/libea/test/test_rng.cpp +++ b/libea/test/test_rng.cpp @@ -1,3 +1,22 @@ +/* test_rng.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libea/test/test_selection.cpp b/libea/test/test_selection.cpp index a40a504..7e8d81d 100644 --- a/libea/test/test_selection.cpp +++ b/libea/test/test_selection.cpp @@ -1,3 +1,22 @@ +/* test_selection.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include "test.h" #include diff --git a/libfn/cuda/include/fn/hmm/gpu_network.h b/libfn/cuda/include/fn/hmm/gpu_network.h index 3a7b6fe..dcfc1d5 100644 --- a/libfn/cuda/include/fn/hmm/gpu_network.h +++ b/libfn/cuda/include/fn/hmm/gpu_network.h @@ -1,3 +1,22 @@ +/* gpu_network.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_GPU_NETWORK_H_ #define _FN_HMM_GPU_NETWORK_H_ diff --git a/libfn/cuda/include/fn/hmm/gpu_update.h b/libfn/cuda/include/fn/hmm/gpu_update.h index be1fab7..5cc794b 100644 --- a/libfn/cuda/include/fn/hmm/gpu_update.h +++ b/libfn/cuda/include/fn/hmm/gpu_update.h @@ -1,3 +1,22 @@ +/* gpu_update.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_GPU_UPDATE_H_ #define _FN_HMM_GPU_UPDATE_H_ diff --git a/libfn/cuda/src/gpu_network.cpp b/libfn/cuda/src/gpu_network.cpp index edaf618..bc110f0 100644 --- a/libfn/cuda/src/gpu_network.cpp +++ b/libfn/cuda/src/gpu_network.cpp @@ -1,3 +1,22 @@ +/* gpu_network.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include /*! Constructor. diff --git a/libfn/cuda/test/test.cpp b/libfn/cuda/test/test.cpp index 308f671..29bfcf6 100644 --- a/libfn/cuda/test/test.cpp +++ b/libfn/cuda/test/test.cpp @@ -1,3 +1,22 @@ +/* test.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/cuda/test/test.h b/libfn/cuda/test/test.h index 366ea8f..d6d7204 100644 --- a/libfn/cuda/test/test.h +++ b/libfn/cuda/test/test.h @@ -1,3 +1,22 @@ +/* test.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _TEST_H_ #define _TEST_H_ diff --git a/libfn/examples/maze/src/main.cpp b/libfn/examples/maze/src/main.cpp index 673450b..a481e9a 100644 --- a/libfn/examples/maze/src/main.cpp +++ b/libfn/examples/maze/src/main.cpp @@ -1,3 +1,22 @@ +/* main.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/include/fn/hmm/deterministic_node.h b/libfn/include/fn/hmm/deterministic_node.h index 404ca75..83b0d36 100644 --- a/libfn/include/fn/hmm/deterministic_node.h +++ b/libfn/include/fn/hmm/deterministic_node.h @@ -1,3 +1,22 @@ +/* deterministic_node.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_DETERMINISTIC_NODE_H_ #define _FN_HMM_DETERMINISTIC_NODE_H_ diff --git a/libfn/include/fn/hmm/graph.h b/libfn/include/fn/hmm/graph.h index f103cb6..4b40e83 100644 --- a/libfn/include/fn/hmm/graph.h +++ b/libfn/include/fn/hmm/graph.h @@ -1,3 +1,22 @@ +/* graph.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_GRAPHVIZ_H_ #define _FN_HMM_GRAPHVIZ_H_ diff --git a/libfn/include/fn/hmm/hmm.h b/libfn/include/fn/hmm/hmm.h index 97740b1..feac7eb 100644 --- a/libfn/include/fn/hmm/hmm.h +++ b/libfn/include/fn/hmm/hmm.h @@ -1,3 +1,22 @@ +/* hmm.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_HMM_H_ #define _FN_HMM_HMM_H_ diff --git a/libfn/include/fn/hmm/hmm_evolution.h b/libfn/include/fn/hmm/hmm_evolution.h index b4ff07e..7e80c01 100644 --- a/libfn/include/fn/hmm/hmm_evolution.h +++ b/libfn/include/fn/hmm/hmm_evolution.h @@ -1,3 +1,22 @@ +/* hmm_evolution.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_HMM_EVOLUTION_H_ #define _FN_HMM_HMM_EVOLUTION_H_ diff --git a/libfn/include/fn/hmm/hmm_header.h b/libfn/include/fn/hmm/hmm_header.h index fdcbf54..0587bdf 100644 --- a/libfn/include/fn/hmm/hmm_header.h +++ b/libfn/include/fn/hmm/hmm_header.h @@ -1,3 +1,22 @@ +/* hmm_header.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_HMM_HEADER_H_ #define _FN_HMM_HMM_HEADER_H_ diff --git a/libfn/include/fn/hmm/hmm_instruments.h b/libfn/include/fn/hmm/hmm_instruments.h index 55a0faa..1534d20 100644 --- a/libfn/include/fn/hmm/hmm_instruments.h +++ b/libfn/include/fn/hmm/hmm_instruments.h @@ -1,3 +1,22 @@ +/* hmm_instruments.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_HMM_INSTRUMENTS_H_ #define _FN_HMM_HMM_INSTRUMENTS_H_ diff --git a/libfn/include/fn/hmm/hmm_network.h b/libfn/include/fn/hmm/hmm_network.h index 45db20b..e5cb674 100644 --- a/libfn/include/fn/hmm/hmm_network.h +++ b/libfn/include/fn/hmm/hmm_network.h @@ -1,3 +1,22 @@ +/* hmm_network.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_HMM_NETWORK_H_ #define _FN_HMM_HMM_NETWORK_H_ diff --git a/libfn/include/fn/hmm/hmm_node.h b/libfn/include/fn/hmm/hmm_node.h index 715f6ce..7723a7e 100644 --- a/libfn/include/fn/hmm/hmm_node.h +++ b/libfn/include/fn/hmm/hmm_node.h @@ -1,3 +1,22 @@ +/* hmm_node.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_HMM_NODE_H_ #define _FN_HMM_HMM_NODE_H_ diff --git a/libfn/include/fn/hmm/output.h b/libfn/include/fn/hmm/output.h index 2fac0c5..de8fb2a 100644 --- a/libfn/include/fn/hmm/output.h +++ b/libfn/include/fn/hmm/output.h @@ -1,3 +1,22 @@ +/* output.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_OUTPUT_H_ #define _FN_HMM_OUTPUT_H_ diff --git a/libfn/include/fn/hmm/primitive.h b/libfn/include/fn/hmm/primitive.h index 98e7133..ca1e167 100644 --- a/libfn/include/fn/hmm/primitive.h +++ b/libfn/include/fn/hmm/primitive.h @@ -1,3 +1,22 @@ +/* primitive.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_PRIMITIVE_H_ #define _FN_HMM_PRIMITIVE_H_ diff --git a/libfn/include/fn/hmm/probabilistic_node.h b/libfn/include/fn/hmm/probabilistic_node.h index a3e14d9..81a800b 100644 --- a/libfn/include/fn/hmm/probabilistic_node.h +++ b/libfn/include/fn/hmm/probabilistic_node.h @@ -1,3 +1,22 @@ +/* probabilistic_node.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _FN_HMM_PROBABILISTIC_NODE_H_ #define _FN_HMM_PROBABILISTIC_NODE_H_ diff --git a/libfn/include/fn/nn/activation.h b/libfn/include/fn/nn/activation.h index a138d12..c3a97ad 100644 --- a/libfn/include/fn/nn/activation.h +++ b/libfn/include/fn/nn/activation.h @@ -1,3 +1,22 @@ +/* activation.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_ACTIVATION_H_ #define _NN_ACTIVATION_H_ diff --git a/libfn/include/fn/nn/back_propagation.h b/libfn/include/fn/nn/back_propagation.h index c4c03f7..08985b4 100644 --- a/libfn/include/fn/nn/back_propagation.h +++ b/libfn/include/fn/nn/back_propagation.h @@ -1,3 +1,22 @@ +/* back_propagation.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_BACK_PROPAGATION_H_ #define _NN_BACK_PROPAGATION_H_ diff --git a/libfn/include/fn/nn/ctrnn.h b/libfn/include/fn/nn/ctrnn.h index 6debcde..4c3bcac 100644 --- a/libfn/include/fn/nn/ctrnn.h +++ b/libfn/include/fn/nn/ctrnn.h @@ -1,3 +1,22 @@ +/* ctrnn.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_CTRNN_H_ #define _NN_CTRNN_H_ diff --git a/libfn/include/fn/nn/feed_forward.h b/libfn/include/fn/nn/feed_forward.h index 135c356..f257b0e 100644 --- a/libfn/include/fn/nn/feed_forward.h +++ b/libfn/include/fn/nn/feed_forward.h @@ -1,3 +1,22 @@ +/* feed_forward.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_FEED_FORWARD_H_ #define _NN_FEED_FORWARD_H_ diff --git a/libfn/include/fn/nn/layout.h b/libfn/include/fn/nn/layout.h index 9756349..745e8b9 100644 --- a/libfn/include/fn/nn/layout.h +++ b/libfn/include/fn/nn/layout.h @@ -1,3 +1,22 @@ +/* layout.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_LAYOUT_H #define _NN_LAYOUT_H diff --git a/libfn/include/fn/nn/neural_network.h b/libfn/include/fn/nn/neural_network.h index c042c82..75023d6 100644 --- a/libfn/include/fn/nn/neural_network.h +++ b/libfn/include/fn/nn/neural_network.h @@ -1,3 +1,22 @@ +/* neural_network.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_NEURAL_NETWORK_H_ #define _NN_NEURAL_NETWORK_H_ diff --git a/libfn/include/fn/nn/neuron.h b/libfn/include/fn/nn/neuron.h index 7c7c910..43cbc59 100644 --- a/libfn/include/fn/nn/neuron.h +++ b/libfn/include/fn/nn/neuron.h @@ -1,3 +1,22 @@ +/* neuron.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_NEURON_H_ #define _NN_NEURON_H_ diff --git a/libfn/include/fn/nn/recurrent.h b/libfn/include/fn/nn/recurrent.h index 071a50e..f6b16ab 100644 --- a/libfn/include/fn/nn/recurrent.h +++ b/libfn/include/fn/nn/recurrent.h @@ -1,3 +1,22 @@ +/* recurrent.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_RECURRENT_H_ #define _NN_RECURRENT_H_ diff --git a/libfn/include/fn/nn/sigmoid.h b/libfn/include/fn/nn/sigmoid.h index 284140c..543239c 100644 --- a/libfn/include/fn/nn/sigmoid.h +++ b/libfn/include/fn/nn/sigmoid.h @@ -1,3 +1,22 @@ +/* sigmoid.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _NN_SIGMOID_H_ #define _NN_SIGMOID_H_ diff --git a/libfn/src/hmm/deterministic_node.cpp b/libfn/src/hmm/deterministic_node.cpp index f1b82e0..4a01afd 100644 --- a/libfn/src/hmm/deterministic_node.cpp +++ b/libfn/src/hmm/deterministic_node.cpp @@ -1,3 +1,22 @@ +/* deterministic_node.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/src/hmm/graph.cpp b/libfn/src/hmm/graph.cpp index 43b70aa..88b005e 100644 --- a/libfn/src/hmm/graph.cpp +++ b/libfn/src/hmm/graph.cpp @@ -1,3 +1,22 @@ +/* graph.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include @@ -235,4 +254,4 @@ void fn::hmm::write_graphviz(const std::string& title, std::ostream& out, const } out << "}" << std::endl; -} \ No newline at end of file +} diff --git a/libfn/src/hmm/hmm.cpp b/libfn/src/hmm/hmm.cpp index 9ff52ef..cf5064f 100644 --- a/libfn/src/hmm/hmm.cpp +++ b/libfn/src/hmm/hmm.cpp @@ -1,3 +1,22 @@ +/* hmm.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include int fn::hmm::options::NODE_INPUT_LIMIT=8; diff --git a/libfn/src/hmm/hmm_network.cpp b/libfn/src/hmm/hmm_network.cpp index bb2459d..d11f423 100644 --- a/libfn/src/hmm/hmm_network.cpp +++ b/libfn/src/hmm/hmm_network.cpp @@ -1,3 +1,22 @@ +/* hmm_network.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include diff --git a/libfn/src/hmm/hmm_node.cpp b/libfn/src/hmm/hmm_node.cpp index b9eed2a..d62afae 100644 --- a/libfn/src/hmm/hmm_node.cpp +++ b/libfn/src/hmm/hmm_node.cpp @@ -1,3 +1,22 @@ +/* hmm_node.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/src/hmm/probabilistic_node.cpp b/libfn/src/hmm/probabilistic_node.cpp index b757e31..c099fee 100644 --- a/libfn/src/hmm/probabilistic_node.cpp +++ b/libfn/src/hmm/probabilistic_node.cpp @@ -1,3 +1,22 @@ +/* probabilistic_node.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/src/nn/nn.cpp b/libfn/src/nn/nn.cpp index 92c39db..2e6b59d 100644 --- a/libfn/src/nn/nn.cpp +++ b/libfn/src/nn/nn.cpp @@ -1,3 +1,22 @@ +/* nn.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/test/test.cpp b/libfn/test/test.cpp index 3fe57f2..a8251dd 100644 --- a/libfn/test/test.cpp +++ b/libfn/test/test.cpp @@ -1,3 +1,22 @@ +/* test.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #define BOOST_TEST_DYN_LINK #define BOOST_TEST_MAIN #include "test.h" diff --git a/libfn/test/test.h b/libfn/test/test.h index 77e1fb4..2a73b48 100644 --- a/libfn/test/test.h +++ b/libfn/test/test.h @@ -1,3 +1,22 @@ +/* test.h + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #ifndef _TEST_H_ #define _TEST_H_ diff --git a/libfn/test/test_cat.cpp b/libfn/test/test_cat.cpp index 05cb974..0eb9ada 100644 --- a/libfn/test/test_cat.cpp +++ b/libfn/test/test_cat.cpp @@ -1,3 +1,22 @@ +/* test_cat.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include @@ -210,4 +229,4 @@ BOOST_AUTO_TEST_CASE(test_hmm_network_mult) { for(int i=0; i<(tc_size/2); ++i) { BOOST_CHECK(out[i]==in[i+tc_size/2]); } -} \ No newline at end of file +} diff --git a/libfn/test/test_network.cpp b/libfn/test/test_network.cpp index 0630def..239aa9d 100644 --- a/libfn/test/test_network.cpp +++ b/libfn/test/test_network.cpp @@ -1,3 +1,22 @@ +/* test_network.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/test/test_nodes.cpp b/libfn/test/test_nodes.cpp index 4fc9ae7..84452f5 100644 --- a/libfn/test/test_nodes.cpp +++ b/libfn/test/test_nodes.cpp @@ -1,3 +1,22 @@ +/* test_nodes.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include diff --git a/libfn/test/test_update.cpp b/libfn/test/test_update.cpp index 2019d05..f5f800e 100644 --- a/libfn/test/test_update.cpp +++ b/libfn/test/test_update.cpp @@ -1,3 +1,22 @@ +/* test_update.cpp + * + * This file is part of EALib. + * + * Copyright 2012 David B. Knoester. + * + * This program is free software: you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation, either version 3 of the License, or + * (at your option) any later version. + * + * This program is distributed in the hope that it will be useful, + * but WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + * GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see . + */ #include #include #include