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parsing.rb
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readme.md

EMBL to FASTA parser

An EMBL to FASTA file parser done as a course exercise. Extracts from the EMBL file:

  1. the AC code
  2. the length of the sequence
  3. the organism whose sequence is refferred to
  4. the description
  5. the sequence

If the sequence is about the mRNA:

  1. the start and end of the coding sequence
  2. wheter there are the start {atg} and end {taa | tga | tag} codons
  3. the coding sequence from the start index to the end index