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Commits on Feb 22, 2013
  1. @hjmjohnson

    Merge pull request #202 from aghayoor/cppcheck_warnings

    hjmjohnson authored
    cppcheck warnings that are marked as warning
  2. @aghayoor
  3. @hjmjohnson

    Merge pull request #201 from aghayoor/cppcheck_style

    hjmjohnson authored
    cppcheck style warnings
  4. @aghayoor

    cppcheck style warnings

    aghayoor authored
  5. @hjmjohnson
  6. @hjmjohnson

    Merge pull request #200 from aghayoor/cppcheck_performance

    hjmjohnson authored
    Fix ccppcheck performance warnings for the BRAINSStandAlone
Commits on Feb 21, 2013
  1. @aghayoor

    Merge pull request #199 from aghayoor/BCD_testFailure

    aghayoor authored
    Fix test failures of BRAINSConstellationDetector
  2. @aghayoor
Commits on Feb 19, 2013
  1. @aghayoor

    Fix test failures of BRAINSConstellationDetector

    aghayoor authored
    Some of the BCD tests were failing because of recent changes on how we
    write float numbers as strings.
    The results have not changed; just the way they are presented (the
        precision of the floating numbers) have changed. Therefore, I just
    replaced the previous baselines by the modified versions.
Commits on Feb 18, 2013
  1. @hjmjohnson

    Merge pull request #196 from dmwelch/bug/brains-module

    hjmjohnson authored
    brains Python module fix for incorrect WM thresholds
  2. @hjmjohnson

    Merge pull request #198 from dmwelch/enh/pep8

    hjmjohnson authored
    GIT: added pep8 configuration file and appended to .gitignore
  3. BUG: Fixed faulty thresholds for WM partial volumes

    authored
    STYLE: Renamed posteriors list to partials
  4. @aghayoor

    Merge pull request #195 from aghayoor/BRAINSFit_SyNTestFailures

    aghayoor authored
    Increase the testing time for the BRAINSFit tests
  5. @aghayoor
Commits on Feb 16, 2013
  1. @hjmjohnson
  2. @matsuij @hjmjohnson

    ENH: Add DWI scan padding

    matsuij authored hjmjohnson committed
    Now pads image on all sides
Commits on Feb 15, 2013
  1. @Chaircrusher
  2. @hjmjohnson
Commits on Feb 14, 2013
  1. @Chaircrusher

    Merge pull request #194 from Chaircrusher/BValue_Format

    Chaircrusher authored
    COMP: fix format for BValue in DWIConvert
  2. @Chaircrusher
Commits on Feb 12, 2013
  1. @aghayoor @hjmjohnson

    BUG: Fix the "ImageCalculator2DHisteqTest" error

    aghayoor authored hjmjohnson committed
    I used the proper images for the input and replaced the baseline.
    Comprehensive explanations are given in PREDICTIMG-1684 jira ticket.
Commits on Feb 7, 2013
  1. @Chaircrusher

    Merge pull request #189 from Chaircrusher/GTractResampleInPlaceBug

    Chaircrusher authored
    BUG: check wrong var when writing out gradient vectors
  2. @Chaircrusher
  3. @Chaircrusher

    Merge pull request #188 from Chaircrusher/DoubleConversionFixes

    Chaircrusher authored
    BUG: Compile errors w/packages turned off by default.
  4. @Chaircrusher
  5. @hjmjohnson

    COMP: Avoid continuous rebuild of ExternalPackages

    hjmjohnson authored
    New option added to that defaults to off for FORCE_EXTERNAL_BUILDS.
    This needs to be turned ON to allow updating of external packages.
    
    Needed to split the ExternalProject command and argument into separate
    varables for their effect to work.  Otherwise they were having no
    noticiable effect on the build system.
  6. @Chaircrusher

    Merge pull request #187 from Chaircrusher/IOStreamDoubleConversion

    Chaircrusher authored
    COMP: Review use of iostream & use double-conversion where needed
  7. @Chaircrusher
Commits on Feb 6, 2013
  1. @Chaircrusher

    Merge pull request #186 from Chaircrusher/NumericPrecisionFixes

    Chaircrusher authored
    BUG: use consistent accurate string representation of floating point
  2. @Chaircrusher
Commits on Feb 5, 2013
  1. @hjmjohnson

    BUG: Logic for re-running data sinks was incorrect

    hjmjohnson authored
    The logic for re-running data sinks was not correct.
  2. @Chaircrusher

    Merge pull request #185 from Chaircrusher/Build_Fixes

    Chaircrusher authored
    ENH: Push DoubleToString class to BRAINSCommonLib
  3. @hjmjohnson

    BUG: Freesurfer modules re-written.

    hjmjohnson authored
    The freesurfer scripts were not internally consistent, nor were they
    correct.  A line-by-line review was done diagramming what the inputs/outputs
    were for each stage, regularizing the variable names and meanings across the
    different stages of running, and verifying that the correct paths were being
    created.
  4. @Chaircrusher

    ENH: Push DoubleToString class to BRAINSCommonLib

    Chaircrusher authored
    COMP: Fix some compile problems.
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