Pinned repositories

  1. dx-toolkit

    DNAnexus platform client libraries

    Java 54 53

  2. dx-javascript-toolkit

    DNAnexus Javascript Libraries

    JavaScript 10 1

  • DNAnexus platform client libraries

    Java 54 53 Apache-2.0 Updated Aug 16, 2018
  • Workflow Description Language compiler for the DNAnexus platform

    Java 12 4 Apache-2.0 Updated Aug 16, 2018
  • Runs a combination of tools to generate structural variant calls on whole-genome sequencing data

    Python 6 2 Apache-2.0 Updated Aug 8, 2018
  • Scripts used for Mosaic Community Challenges

    Python 1 Updated Aug 7, 2018
  • DNAnexus Javascript Libraries

    JavaScript 10 Apache-2.0 Updated Aug 2, 2018
  • Minimal docker image for running the promtool utility for validating prometheus config files.

    Dockerfile Apache-2.0 Updated Jul 23, 2018
  • C++ 5 Updated Jul 19, 2018
  • Apps to build your app/applet/asset from source in a containerized environment.

    Python 1 1 Apache-2.0 Updated Jul 18, 2018
  • Azure metrics exporter for Prometheus

    Go 10 Updated Jul 16, 2018
  • Go 2 Apache-2.0 Updated Jul 11, 2018
  • Import and run CWL workflows on DNAnexus (alpha)

    Python 9 6 Apache-2.0 Updated Jul 9, 2018
  • Gathers security vulnerability metrics from snyk.io for use in Prometheus monitoring

    JavaScript 1 2 Apache-2.0 Updated Jun 27, 2018
  • DevSec SSL/TLS Baseline - InSpec Profile

    Ruby 12 Apache-2.0 Updated Jun 5, 2018
  • Examples and tutorials for app(let) developers:

    Perl 11 9 Apache-2.0 Updated May 8, 2018
  • Deep neural networks for predicting CpG methylation

    Python 47 MIT Updated Apr 19, 2018
  • Readshift: A method to shift high-quality NGS datasets into noisy datasets

    Python 16 2 MIT Updated Jan 16, 2018
  • Dot: An interactive dot plot viewer for comparative genomics

    JavaScript 31 3 MIT Updated Jan 11, 2018
  • viral-ngs

    Python 3 29 Updated Jan 11, 2018
  • Inter Process Communication Module for node supporting Unix sockets, TCP, TLS, and UDP. Giving lightning speed on Linux, Mac, and Windows. Neural Networking in Node.JS

    JavaScript 65 Updated Dec 6, 2017
  • A very simple Salesforce.com REST API client for Python

    Python 298 Updated Nov 11, 2017
  • SAMtools mpileup: Variant calling for SNPs and Indels using SAMtools mpileup

    C 1 1 Updated Sep 22, 2017
  • JavaScript Updated Jul 17, 2017
  • URL Fetcher: Fetch a file from a URL and upload it as a File.

    1 Updated May 10, 2017
  • C 21 348 Updated Nov 12, 2016
  • Python 1 Updated Oct 5, 2016
  • C library for high-throughput sequencing data formats.

    C 249 Updated Sep 22, 2016
  • additional "s3" protocol for apt so you can host your giant apt repository in s3 on the cheap!

    C++ 101 GPL-3.0 Updated Jun 7, 2016
  • mc3

    Forked from OpenGenomics/mc3
    Python 1 8 Updated Apr 13, 2016
  • igv.js

    Forked from igvteam/igv.js

    Lightweight html5 version of the Integrative Genomics Viewer

    JavaScript 78 MIT Updated Feb 3, 2016
  • Mongo DB Native NodeJS Driver

    JavaScript 1 1,339 Apache-2.0 Updated Feb 4, 2016