@dnanexus-rnd

DNAnexus R&D

Technology enabling the translation of genomic data into precision medicine

  • dxWDL

    Workflow Definition Language compiler for the DNAnexus platform

    Scala 7 1 Updated Aug 3, 2017

  • GLnexus

    Scalable datastore for population genome sequencing, with on-demand joint genotyping

    C++ 18 3 Updated Aug 3, 2017

  • htsnexus

    Experimental web service for accessing and slicing bam/cram/vcf.bgzip/bcf data

    C++ 4 2 Updated Aug 2, 2017

  • dxvg

    vg integration on DNAnexus

    Shell 2 Updated Aug 1, 2017

  • capnproto

    Forked from capnproto/capnproto

    Cap'n Proto serialization/RPC system

    C++ 398 Updated Apr 12, 2017

  • dx-streaming-upload

    The DNAnexus incremental upload script packaged as an Ansible Role

    Python 2 1 Updated Oct 25, 2016

  • ICGC_fetcher

    DNAnexus app to fetch ICGC controlled-access data using the DCC storage client

    Shell 2 Updated Nov 18, 2015

  • freebayes

    Forked from ekg/freebayes

    Bayesian haplotype-based polymorphism discovery and genotyping.

    C++ 121 Updated Nov 14, 2015

  • schemas

    Forked from ga4gh/ga4gh-schemas

    Work on data models and APIs for Genomic data.

    Python 114 Updated Nov 7, 2015

  • vg

    Forked from vgteam/vg

    tools for working with variation graphs

    C++ 66 Updated Aug 24, 2015

  • fermi2

    Forked from lh3/fermi2
    C 2 Updated Jul 23, 2015

  • fermikit

    Forked from lh3/fermikit

    De novo assembly based variant calling pipeline for Illumina short reads

    TeX 9 Updated Jul 23, 2015

  • scidb-notebooks

    SciDB geno+pheno analysis examples

    HTML 3 1 Updated Jul 18, 2015
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    People
    @mlin mlin Mike Lin