diff --git a/src/SourceBuild/content/eng/Versions.props b/src/SourceBuild/content/eng/Versions.props
index 6ca67b96190f..6b1f0a0bc63f 100644
--- a/src/SourceBuild/content/eng/Versions.props
+++ b/src/SourceBuild/content/eng/Versions.props
@@ -32,8 +32,8 @@
     <!-- msbuild dependencies -->
     <MicrosoftBuildVersion>17.12.6</MicrosoftBuildVersion>
     <!-- nuget dependencies -->
-    <NuGetProtocolVersion>6.12.1</NuGetProtocolVersion>
-    <NuGetProjectModelVersion>6.12.1</NuGetProjectModelVersion>
+    <NuGetProtocolVersion>6.13.1</NuGetProtocolVersion>
+    <NuGetProjectModelVersion>6.13.1</NuGetProjectModelVersion>
     <!-- runtime dependencies -->
     <MicrosoftExtensionsFileSystemGlobbingVersion>9.0.0</MicrosoftExtensionsFileSystemGlobbingVersion>
     <MicrosoftExtensionsLoggingConsoleVersion>9.0.0</MicrosoftExtensionsLoggingConsoleVersion>
diff --git a/src/SourceBuild/content/eng/tools/tasks/Microsoft.DotNet.UnifiedBuild.Tasks/WriteSbrpUsageReport.cs b/src/SourceBuild/content/eng/tools/tasks/Microsoft.DotNet.UnifiedBuild.Tasks/WriteSbrpUsageReport.cs
index baf653674960..bd2e133ac08a 100644
--- a/src/SourceBuild/content/eng/tools/tasks/Microsoft.DotNet.UnifiedBuild.Tasks/WriteSbrpUsageReport.cs
+++ b/src/SourceBuild/content/eng/tools/tasks/Microsoft.DotNet.UnifiedBuild.Tasks/WriteSbrpUsageReport.cs
@@ -9,6 +9,7 @@
 using System.Xml.Linq;
 using Microsoft.Build.Framework;
 using Microsoft.Build.Utilities;
+using NuGet.LibraryModel;
 using NuGet.ProjectModel;
 
 namespace Microsoft.DotNet.UnifiedBuild.Tasks;
@@ -48,8 +49,9 @@ public override bool Execute()
     {
         Log.LogMessage($"Scanning for SBRP Package Usage...");
 
-        ReadSbrpPackages("referencePackages", trackTfms: true);
-        ReadSbrpPackages("textOnlyPackages", trackTfms: false);
+        ReadSbrpPackages(Path.Combine("referencePackages", "src"), trackTfms: true);
+        ReadSbrpPackages(Path.Combine("targetPacks", "ILsrc"), trackTfms: false);
+        ReadSbrpPackages(Path.Combine("textOnlyPackages", "src"), trackTfms: false);
 
         ScanProjectReferences();
 
@@ -110,11 +112,10 @@ private void PurgeNonReferencedReferences()
     private IEnumerable<PackageInfo> GetUnreferencedSbrps() =>
         _sbrpPackages.Values.Where(pkg => pkg.References.Count == 0);
 
-    private string GetSbrpPackagesPath(string packageType) => Path.Combine(SbrpRepoSrcPath, packageType, "src");
-
-    private void ReadSbrpPackages(string packageType, bool trackTfms)
+    private void ReadSbrpPackages(string packageSrcRelativePath, bool trackTfms)
     {
-        foreach (string projectPath in Directory.GetFiles(GetSbrpPackagesPath(packageType), "*.csproj", SearchOption.AllDirectories))
+        string packageSrcPath = Path.Combine(SbrpRepoSrcPath, packageSrcRelativePath);
+        foreach (string projectPath in Directory.GetFiles(packageSrcPath, "*.csproj", SearchOption.AllDirectories))
         {
             DirectoryInfo? directory = Directory.GetParent(projectPath);
             string version = directory!.Name;
@@ -163,28 +164,40 @@ private void ScanProjectReferences()
             LockFile lockFile = new LockFileFormat().Read(projectJsonFile);
             foreach (LockFileTargetLibrary lib in lockFile.Targets.SelectMany(t => t.Libraries))
             {
-                if (!_sbrpPackages.TryGetValue(PackageInfo.GetId(lib.Name, lib.Version?.ToString()), out PackageInfo? info))
-                {
-                    continue;
-                }
-
-                if (!info.References.TryGetValue(lockFile.Path, out HashSet<string>? referencedTfms))
-                {
-                    referencedTfms = [];
-                    info.References.Add(lockFile.Path, referencedTfms);
-                }
-
                 IEnumerable<string> tfms = lib.CompileTimeAssemblies
                     .Where(asm => asm.Path.StartsWith("lib") || asm.Path.StartsWith("ref"))
                     .Select(asm => asm.Path.Split('/')[1]);
-                foreach (string tfm in tfms)
-                {
-                    referencedTfms.Add(tfm);
-                }
+
+                TrackPackageReference(lockFile.Path, lib.Name, lib.Version?.ToString(), tfms);
+            }
+
+            foreach (DownloadDependency downloadDep in lockFile.PackageSpec.TargetFrameworks.SelectMany(fx => fx.DownloadDependencies))
+            {
+                TrackPackageReference(lockFile.Path, downloadDep.Name, downloadDep.VersionRange.MinVersion?.ToString(), Enumerable.Empty<string>());
             }
         }
     }
 
+    private void TrackPackageReference(string lockFilePath, string? name, string? version, IEnumerable<string> tfms)
+    {
+        string id = PackageInfo.GetId(name, version);
+        if (!_sbrpPackages.TryGetValue(id, out PackageInfo? info))
+        {
+            return;
+        }
+
+        if (!info.References.TryGetValue(lockFilePath, out HashSet<string>? referencedTfms))
+        {
+            referencedTfms = [];
+            info.References.Add(lockFilePath, referencedTfms);
+        }
+
+        foreach (string tfm in tfms)
+        {
+            referencedTfms!.Add(tfm);
+        }
+    }
+
     private record PackageInfo(string Name, string Version, string Path, HashSet<string>? Tfms = default)
     {
         public string Id => GetId(Name, Version);