Data and code for analysing "Shank3 Modulates Sleep and Expression of Circadian Transcription Factors" work
These reports have been made with R 3.4.3 and Bioconductor 3.6. With older/newer versions some results could change.
All the needed data are in the data folder.
The samples design is stored in the file design/all_samples_short_names.tsv.
The useful functions are stored in the R folder, while the workflow in Rmarkdown format is in the analysis_report.Rmd file. The compiled version is in analysis_report.html or analysis_report.pdf