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Bioconductor Code Search for Package Developers
Full text search system for all of bioconductor devel (2.14) source code on the web. The beta version of the system is opened to public at http://search.bioconductor.JP.
- Fast full text search
- Code highlighting
- Facet search by package name
- "More Like this"
# Only first time cd search bunlde install # Extract source code from Bioc package and insert database cd ../make_db rake load # Starting solr server cd ../search bundle exec rake sunspot:solr:stop bundle exec rake sunspot:solr:start # Re-indexing solr, if you need it. rake sunspot:reindex # Restarting Rails with passenger, if you need it. touch tmp/restart.txt
1. Mirroring bioc-devel
rsync -zrtlv --delete master.bioconductor.org::2.14 /mirror/packages/2.14 > /mirror/update.2.14.txt 2>&1
2. Configure load.rb
emacs -nw /search.bioconductor.jp/make_db/load.rb base_dir = '/mirror/packages/2.14/bioc/src/contrib'
3. Load database
rake load rake sunspot:reindex touch tmp/restart.txt
Source codes of this system (without sources of each bioconductor package) are licensed under a Artistic-2.0.
Itoshi NIKAIDO email@example.com Copyright (C) 2012-2014. Itoshi NIKAIDO.