analysis to accompany eLife Insight piece 2018
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analysis.R
inventory_data.csv

README.md

gene_inventory_2018

Analysis to accompany eLife Insight piece:

Lewis, ZR and CW Dunn. (2018) Genome evolution: We are not so special. eLife. http://dx.doi.org/10.7554/eLife.38726

Figure 1

Contents

  • inventory_data.csv Gene inventory data from the cited papers. Source of the data is listed under "provenance."
  • analysis.R The R script for generating Figure 1, panel C.

Dependencies

  • R packages tidyverse and reshape2.

Running the code

Each time you want to execute an analysis:

  • Navigate to the root of the repository, e.g., cd gene_inventory_2018.
  • Run the code, e.g., launch R and run source("analysis.R").

License

See the LICENSE file for more license details.