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01-variability.R
02-dataset_sources.R
03a-topology_statistics.R
03b-topology_complexity.R
04-complementarity.R
05-benchmark_interpretation_figure.R
06-compare_timings.R
README.Rmd
README.md
helper-04-complementarity.R
scaling_fit_cv.R

README.md

Benchmark interpretation

Various attempts at interpreting the results of the benchmark.

# script/folder description
1 πŸ“„variability.R The variability of the benchmarking results across dataset sources and trajectory types
2 πŸ“„dataset_sources.R Similarity of the results across dataset sources
3a πŸ“„topology_statistics.R Calculate some statistics about the topologies predicted by the methods
3b πŸ“„topology_complexity.R Compare the complexity of the topologies predicted by the methods
4 πŸ“„complementarity.R Try to find good combinations of methods given a set of datasets, which could indicate some complementarity between methods
5 πŸ“„benchmark_interpretation_figure.R Combine the different figures of this experiment into one
6 πŸ“„compare_timings.R Compare the predicted execution times and memory usages with the actual ones
πŸ“„helper-complementarity.R Helper plotting functions the complementarity experiment
πŸ“„scaling_fit_cv.R Test different models for scalability, using the running times from the benchmark as validation set
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