Module Network Inference software
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pauerola Merge pull request #6 from pauerola/master
[revamp] use only genes that are in the module list
Latest commit f940a6c Jan 26, 2018
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LemonTree Merge pull request #6 from pauerola/master Jan 26, 2018 Update Mar 25, 2015


Welcome to the Lemon-Tree project. Lemon-Tree is a "one-stop shop" software suite for module network inference that aims to make module network methods available to a broader community of users while simultaneously facilitating and encouraging collaborations between developers. Module networks are probabilistic graphical models which consist of modules of coregulated genes and their regulatory programs, and they can be inferred from integrated genomic data compendia (including gene expression, microRNA expression, copy number variation, and more) measured in a large number of individuals or experimental conditions.

For more information, please consult the associated wiki pages for this project.