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./images/ecell-logo-with-title.png

E-Cell System version 4 API reference

E-Cell System is a software platform for modeling, simulation and analysis of complex, heterogeneous and multi-scale systems like the cell.

E-Cell4 is a free and open-source software licensed under the GNU General Public License version 2. The source code is available on GitHub.

Please refer to https://github.com/ecell/ecell4 for information about installation instructions.

Tutorials

.. toctree::
   :glob:

   tutorials/tutorial1
   tutorials/tutorial2
   tutorials/tutorial3
   tutorials/tutorial4
   tutorials/tutorial5
   tutorials/tutorial6
   tutorials/tutorial7
   tutorials/tutorial8
   tutorials/tutorial9
   tutorials/tutorial10

Examples

.. toctree::
   :glob:

   examples/example1
   examples/example2
   examples/example3
   examples/example4
   examples/example5
   examples/example6
   examples/example7
   examples/example8
   examples/example9
   examples/example10
   examples/example11

API

.. toctree::
   :glob:

   api/core
   api/gillespie
   api/ode
   api/meso
   api/spatiocyte
   api/bd
   api/egfrd
   api/util
   api/util.viz
   api/util.decorator