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DL4J: Upsampling3D layer only supports NCDHW format, no NDHWC support #8016

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AlexDBlack opened this issue Jul 17, 2019 · 0 comments · Fixed by SkymindIO/deeplearning4j#81

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@AlexDBlack
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commented Jul 17, 2019

As per title. It's not configurable and uses hardcoded NCDHW (axis 1) in the layer implementation.

@AlexDBlack AlexDBlack added the DL4J label Jul 17, 2019

AlexDBlack added a commit to SkymindIO/deeplearning4j that referenced this issue Jul 25, 2019
eclipse#8016 Upsampling3D - add NDHWC format support
Signed-off-by: AlexDBlack <blacka101@gmail.com>
AlexDBlack added a commit to SkymindIO/deeplearning4j that referenced this issue Jul 25, 2019
Various DL4J/ND4J fixes (#81)
* eclipse#7954 Force refresh of UI when switching tabs on overview page

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8017 Concurrent modification exception (synchronize) fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8033 Don't initialize updater in middle of writing memory crash dump

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8208 Fix shape checks for ND4J int[] creator methods

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#6385 eclipse#7992 Keras import naming fixes + cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>
AlexDBlack added a commit that referenced this issue Aug 5, 2019
Various DL4J/ND4J fixes (#81)
* #7954 Force refresh of UI when switching tabs on overview page

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8017 Concurrent modification exception (synchronize) fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8033 Don't initialize updater in middle of writing memory crash dump

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8208 Fix shape checks for ND4J int[] creator methods

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #6385 #7992 Keras import naming fixes + cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* #8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>
raver119 added a commit to SkymindIO/deeplearning4j that referenced this issue Aug 7, 2019
[WIP] build time improvements (#106)
* fix pad javadoc and @see links. (#72)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* [WIP] More fixes (#73)

* special tests for ConstantTadHelper/ConstantShapeHelper

Signed-off-by: raver119 <raver119@gmail.com>

* release methods for data buffers

Signed-off-by: raver119 <raver119@gmail.com>

* delete temporary buffer Java side

Signed-off-by: raver119 <raver119@gmail.com>

* delete temporary buffer Java side

Signed-off-by: raver119 <raver119@gmail.com>

* delete temporary TadPack C++/Java side (#74)

Signed-off-by: raver119 <raver119@gmail.com>

* Zoo model TF import test updates (#75)

* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers

* - new NDArray methods like()/ulike() (#77)

- fix for depthwise_conv2d_bp + special test

Signed-off-by: raver119 <raver119@gmail.com>

* upsampling2d fix CUDA

Signed-off-by: raver119 <raver119@gmail.com>

* DL4J trace logging (#79)

* MLN/CG trace logging for debugging

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Tiny tweak

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* strided_slice_bp shape fn leak fix

Signed-off-by: raver119 <raver119@gmail.com>

* SameDiff fixes and naming (#78)

* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching

* fix javadoc. (#76)

* fix javadoc.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace most @see with @link s.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* 4 additional tests

Signed-off-by: raver119 <raver119@gmail.com>

* Various DL4J/ND4J fixes (#81)

* eclipse#7954 Force refresh of UI when switching tabs on overview page

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8017 Concurrent modification exception (synchronize) fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8033 Don't initialize updater in middle of writing memory crash dump

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8208 Fix shape checks for ND4J int[] creator methods

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#6385 eclipse#7992 Keras import naming fixes + cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Refactor NativeOps.h to export C functions

* Actually export functions from NativeOps.h

* Adapt the Java wrappers in ND4J generated with JavaCPP

* Create C wrappers for some of the C++ classes currently used by ND4J

* remove duplicate code in createBufferDetached. (#83)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Keras model import - updater lr fix (#84)

* Keras model import - updater lr fix

Signed-off-by: eraly <susan.eraly@gmail.com>

* Keras model import - updater lr fix, cleanup

Signed-off-by: eraly <susan.eraly@gmail.com>

* Fix functions of OpaqueVariablesSet

* SameDiff Convolution Config validation, better output methods (#82)

* Conv Config validation & tests

Signed-off-by: Ryan Nett <rnett@skymind.io>

* stackOutputs utility method

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use constructor for validation, support negative kernel sizes (infered from weights)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better output methods

Signed-off-by: Ryan Nett <rnett@skymind.io>

* move output to be with fit and evaluate

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* refactor duplicate code from pad methods. (#86)

* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Various ND4J/DL4J fixes and improvements (#87)

* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#6488 ElementWiseVertex broadcast support

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Constructors and broadcast supported it Transforms.max/min

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* eclipse#8054 ElementWiseVertex now supports broadcast inputs

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* eclipse#8057 Nd4j.create overload dtype fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#7551 ND4J Shape validation fix

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* [WIP] Numpy boolean import (#91)

* numpy bool type

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* numpy bool java side

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* remove create method with unused parameter. (#89)

* remove create method with unused parameter.

* removed more unused methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* removing more unused code.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* last removal of unused code.

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* remove createSparse methods. (#92)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Various ND4J/DL4J fixes (#90)

* Deprecate Old*Op instances

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* eclipse#8063 eclipse#8054 Broadcast exceptions + cleanup inplace ops

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Small fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Remove bad test condition

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#7993 Fix shape function issue in crop_and_resize op

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* DL4J SameDiff lambda layer fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8029 Fix for pnorm backprop math

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* eclipse#8038 Fix Op profiler NaN/Inf triggering + add tests (#93)

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* createUninitializedDetached refactoring. (#94)

* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* createUninitializedDetached refactored.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* cuda build fix for issues introduced by recent refactoring

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* [WIP] More of CUDA (#95)

* initial commit

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* Implementation of hashcode cuda helper. Working edition.

* Fixed parallel test input arangements.

* Fixed tests for hashcode op.

* Fixed shape calculation for image:crop_and_resize op and test.

* NativeOps tests. Initial test suite.

* Added tests for indexReduce methods.

* Added test on execBroadcast with NDArray as dimensions.

* Added test on execBroadcastBool with NDArray as dimensions.

* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.

* Added tests for execReduce with scalar results.

* Added reduce tests for non-empty dims array.

* Added tests for reduce3.

* Added tests for execScalar.

* Added tests for execSummaryStats.

* - provide cpu/cuda code for batch_to_space
- testing it

Signed-off-by: Yurii <yurii@skymind.io>

* - remove old test for batch_to_space (had wrong format and numbers were not checked)

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed complilation errors with test.

* Added test for execTransformFloat.

* Added test for execTransformSame.

* Added test for execTransformBool.

* Added test for execTransformStrict.

* Added tests for execScalar/execScalarBool with TADs.

* Added test for flatten.

* - provide cpu/cuda code for space_to_Batch operaion

Signed-off-by: Yurii <yurii@skymind.io>

* Added test for concat.

* comment unnecessary stuff in s_t_b

Signed-off-by: Yurii <yurii@skymind.io>

* Added test for specialConcat.

* Added tests for memcpy/set routines.

* Fixed pullRow cuda test.

* Added pullRow test.

* Added average test.

* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)

Signed-off-by: Yurii <yurii@skymind.io>

* - debugging and fixing cuda tests in JavaInteropTests file

Signed-off-by: Yurii <yurii@skymind.io>

* - correct some tests

Signed-off-by: Yurii <yurii@skymind.io>

* Added test for shuffle.

* Fixed ops declarations.

* Restored omp and added shuffle test.

* Added convertTypes test.

* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.

* Added sort tests.

* Added tests for execCustomOp.

* - further debuging and fixing tests terminated with crash

Signed-off-by: Yurii <yurii@skymind.io>

* Added tests for calculateOutputShapes.

* Addded Benchmarks test.

* Commented benchmark tests.

* change assertion

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* Added tests for apply_sgd op. Added cpu helper for that op.

* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.

* Added test for assign broadcastable.

* Added tests for assign_bp op.

* Added tests for axpy op.

* - assign/execScalar/execTransformAny signature change
- minor test fix

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* Fixed axpy op.

* meh

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* - fix tests for nativeOps::concat

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* sequential transform/scalar

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* allow nested parallelism

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* assign_bp leak fix

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* block setRNG fix

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* enable parallelism by default

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* enable nested parallelism by default

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* Added cuda implementation for row_count helper.

* Added implementation for tnse gains op helper.

* - take into account possible situations when input arrays are empty in reduce_ cuda stuff

Signed-off-by: Yurii <yurii@skymind.io>

* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.

* Added kernel for tsne/symmetrized op heleper.

* Implementation of tsne/symmetrized op cuda helper. Working edition.

* Eliminated waste printfs.

* Added test for broadcastgradientargs op.

* host-only fallback for empty reduce float

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* - some tests fixes

Signed-off-by: Yurii <yurii@skymind.io>

* - correct the rest of reduce_ stuff

Signed-off-by: Yurii <yurii@skymind.io>

* - further correction of reduce_ stuff

Signed-off-by: Yurii <yurii@skymind.io>

* Added test for Cbow op. Also added cuda implementation for cbow helpers.

* - improve code of stack operation for scalar case

Signed-off-by: Yurii <yurii@skymind.io>

* - provide cuda kernel for gatherND operation

Signed-off-by: Yurii <yurii@skymind.io>

* Implementation of cbow helpers with cuda kernels.

* minor tests tweaks

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* minor tests tweaks

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* - further correction of cuda stuff

Signed-off-by: Yurii <yurii@skymind.io>

* Implementatation of cbow op helper with cuda kernels. Working edition.

* Skip random testing for cudablas case.

* lstmBlockCell context fix

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* Added tests for ELU and ELU_BP ops.

* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.

* Added tests for neq_scalar.

* Added test for noop.

* - further work on clipbynorm_bp

Signed-off-by: Yurii <yurii@skymind.io>

* - get rid of concat op call, use instead direct concat helper call

Signed-off-by: Yurii <yurii@skymind.io>

* lstmBlockCell context fix

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* Added tests for lrelu and lrelu_bp.

* Added tests for selu and selu_bp.

* Fixed lrelu derivative helpers.

* - some corrections in lstm

Signed-off-by: Yurii <yurii@skymind.io>

* operator * result shape fix

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* - correct typo in lstmCell

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* few tests fixed

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* CUDA inverse broadcast bool fix

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* disable MMAP test for CUDA

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* BooleanOp syncToDevice

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* meh

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* additional data types for im2col/col2im

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* Added test for firas_sparse op.

* one more RandomBuffer test excluded

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* Added tests for flatten op.

* Added test for Floor op.

* bunch of tests fixed

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* mmulDot tests fixed

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* more tests fixed

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* Implemented floordiv_bp op and tests.

* Fixed scalar case with cuda implementation for bds.

* - work on cuda kernel for clip_by_norm backprop op is completed

Signed-off-by: Yurii <yurii@skymind.io>

* Eliminate cbow crach.

* more tests fixed

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* more tests fixed

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* Eliminated abortion with batched nlp test.

* more tests fixed

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* Fixed shared flag initializing.

* disabled bunch of cpu workspaces tests

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* scalar operators fix: missing registerSpecialUse call

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* Fixed logdet for cuda and tests.

* - correct clipBynorm_bp

Signed-off-by: Yurii <yurii@skymind.io>

* Fixed crop_and_resize shape datatype.

* - correct some mmul tests

Signed-off-by: Yurii <yurii@skymind.io>

* build fix

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* exclude two methods for JNI

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* exclude two methods for JNI

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* exclude two methods for JNI (#97)

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* temporary stack fix

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* couple of legacy groups reorganized into separate compialtion units

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* wrong include

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* wrong include

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* ReductionLoops_float split

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* maximum

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* some more rearrangements

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* spare ifdef

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* mirror pad

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* - reduce_float split
- mcmodel

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* bad include fix

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* norelax

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* norelax

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* norelax

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* norelax

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* norelax

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* norelax gone

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* get back sm

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* fix couple of tests for msvc

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* fix couple of tests for msvc

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* compress-all

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* reduced arch list

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* compress-all

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* reduced arch list

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* all compute capabilities option for tests

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raver119 added a commit to SkymindIO/deeplearning4j that referenced this issue Aug 14, 2019
[WIP] Remote inference (#96)
* fix pad javadoc and @see links. (#72)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* [WIP] More fixes (#73)

* special tests for ConstantTadHelper/ConstantShapeHelper

Signed-off-by: raver119 <raver119@gmail.com>

* release methods for data buffers

Signed-off-by: raver119 <raver119@gmail.com>

* delete temporary buffer Java side

Signed-off-by: raver119 <raver119@gmail.com>

* delete temporary buffer Java side

Signed-off-by: raver119 <raver119@gmail.com>

* delete temporary TadPack C++/Java side (#74)

Signed-off-by: raver119 <raver119@gmail.com>

* Zoo model TF import test updates (#75)

* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers

* - new NDArray methods like()/ulike() (#77)

- fix for depthwise_conv2d_bp + special test

Signed-off-by: raver119 <raver119@gmail.com>

* upsampling2d fix CUDA

Signed-off-by: raver119 <raver119@gmail.com>

* DL4J trace logging (#79)

* MLN/CG trace logging for debugging

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Tiny tweak

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* strided_slice_bp shape fn leak fix

Signed-off-by: raver119 <raver119@gmail.com>

* SameDiff fixes and naming (#78)

* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching

* fix javadoc. (#76)

* fix javadoc.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace most @see with @link s.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* 4 additional tests

Signed-off-by: raver119 <raver119@gmail.com>

* Various DL4J/ND4J fixes (#81)

* eclipse#7954 Force refresh of UI when switching tabs on overview page

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8017 Concurrent modification exception (synchronize) fix

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8033 Don't initialize updater in middle of writing memory crash dump

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8208 Fix shape checks for ND4J int[] creator methods

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#6385 eclipse#7992 Keras import naming fixes + cleanup

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#8016 Upsampling3D - add NDHWC format support

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Refactor NativeOps.h to export C functions

* Actually export functions from NativeOps.h

* Adapt the Java wrappers in ND4J generated with JavaCPP

* Create C wrappers for some of the C++ classes currently used by ND4J

* remove duplicate code in createBufferDetached. (#83)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Keras model import - updater lr fix (#84)

* Keras model import - updater lr fix

Signed-off-by: eraly <susan.eraly@gmail.com>

* Keras model import - updater lr fix, cleanup

Signed-off-by: eraly <susan.eraly@gmail.com>

* Fix functions of OpaqueVariablesSet

* SameDiff Convolution Config validation, better output methods (#82)

* Conv Config validation & tests

Signed-off-by: Ryan Nett <rnett@skymind.io>

* stackOutputs utility method

Signed-off-by: Ryan Nett <rnett@skymind.io>

* use constructor for validation, support negative kernel sizes (infered from weights)

Signed-off-by: Ryan Nett <rnett@skymind.io>

* better output methods

Signed-off-by: Ryan Nett <rnett@skymind.io>

* move output to be with fit and evaluate

Signed-off-by: Ryan Nett <rnett@skymind.io>

* fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* more fixes

Signed-off-by: Ryan Nett <rnett@skymind.io>

* refactor duplicate code from pad methods. (#86)

* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Various ND4J/DL4J fixes and improvements (#87)

* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* Reshape and reallocate - small fixes

Signed-off-by: AlexDBlack <blacka101@gmail.com>

* eclipse#6488 ElementWiseVertex broadcast support

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* Constructors and broadcast supported it Transforms.max/min

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* eclipse#8054 ElementWiseVertex now supports broadcast inputs

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* eclipse#8057 Nd4j.create overload dtype fix

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* eclipse#7551 ND4J Shape validation fix

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* [WIP] Numpy boolean import (#91)

* numpy bool type

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* numpy bool java side

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* remove create method with unused parameter. (#89)

* remove create method with unused parameter.

* removed more unused methods.

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* removing more unused code.

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* last removal of unused code.

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* remove createSparse methods. (#92)

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* Various ND4J/DL4J fixes (#90)

* Deprecate Old*Op instances

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* eclipse#8063 eclipse#8054 Broadcast exceptions + cleanup inplace ops

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* Small fix

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* Remove bad test condition

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* eclipse#7993 Fix shape function issue in crop_and_resize op

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* DL4J SameDiff lambda layer fix

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* eclipse#8029 Fix for pnorm backprop math

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* eclipse#8038 Fix Op profiler NaN/Inf triggering + add tests (#93)

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* createUninitializedDetached refactoring. (#94)

* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

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* createUninitializedDetached refactored.

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* cuda build fix for issues introduced by recent refactoring

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* initial commit

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* deps tweaks

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* initial prototype

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* modules reorganized

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* gprc module moved to nd4j-remote as well

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* gprc module moved to nd4j-remote as well

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* serving prototype

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* serving prototype

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* serving prototype

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* serving prototype

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* [WIP] More of CUDA (#95)

* initial commit

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* Implementation of hashcode cuda helper. Working edition.

* Fixed parallel test input arangements.

* Fixed tests for hashcode op.

* Fixed shape calculation for image:crop_and_resize op and test.

* NativeOps tests. Initial test suite.

* Added tests for indexReduce methods.

* Added test on execBroadcast with NDArray as dimensions.

* Added test on execBroadcastBool with NDArray as dimensions.

* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.

* Added tests for execReduce with scalar results.

* Added reduce tests for non-empty dims array.

* Added tests for reduce3.

* Added tests for execScalar.

* Added tests for execSummaryStats.

* - provide cpu/cuda code for batch_to_space
- testing it

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* - remove old test for batch_to_space (had wrong format and numbers were not checked)

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* Fixed complilation errors with test.

* Added test for execTransformFloat.

* Added test for execTransformSame.

* Added test for execTransformBool.

* Added test for execTransformStrict.

* Added tests for execScalar/execScalarBool with TADs.

* Added test for flatten.

* - provide cpu/cuda code for space_to_Batch operaion

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* Added test for concat.

* comment unnecessary stuff in s_t_b

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* Added test for specialConcat.

* Added tests for memcpy/set routines.

* Fixed pullRow cuda test.

* Added pullRow test.

* Added average test.

* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)

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* - debugging and fixing cuda tests in JavaInteropTests file

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* - correct some tests

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* Added test for shuffle.

* Fixed ops declarations.

* Restored omp and added shuffle test.

* Added convertTypes test.

* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.

* Added sort tests.

* Added tests for execCustomOp.

* - further debuging and fixing tests terminated with crash

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* Added tests for calculateOutputShapes.

* Addded Benchmarks test.

* Commented benchmark tests.

* change assertion

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* Added tests for apply_sgd op. Added cpu helper for that op.

* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.

* Added test for assign broadcastable.

* Added tests for assign_bp op.

* Added tests for axpy op.

* - assign/execScalar/execTransformAny signature change
- minor test fix

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* Fixed axpy op.

* meh

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* - fix tests for nativeOps::concat

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* sequential transform/scalar

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* allow nested parallelism

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* assign_bp leak fix

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* block setRNG fix

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* enable parallelism by default

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* enable nested parallelism by default

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* Added cuda implementation for row_count helper.

* Added implementation for tnse gains op helper.

* - take into account possible situations when input arrays are empty in reduce_ cuda stuff

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* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.

* Added kernel for tsne/symmetrized op heleper.

* Implementation of tsne/symmetrized op cuda helper. Working edition.

* Eliminated waste printfs.

* Added test for broadcastgradientargs op.

* host-only fallback for empty reduce float

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* - some tests fixes

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* - correct the rest of reduce_ stuff

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* - further correction of reduce_ stuff

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* Added test for Cbow op. Also added cuda implementation for cbow helpers.

* - improve code of stack operation for scalar case

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* - provide cuda kernel for gatherND operation

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* Implementation of cbow helpers with cuda kernels.

* minor tests tweaks

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* minor tests tweaks

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* - further correction of cuda stuff

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* Implementatation of cbow op helper with cuda kernels. Working edition.

* Skip random testing for cudablas case.

* lstmBlockCell context fix

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* Added tests for ELU and ELU_BP ops.

* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.

* Added tests for neq_scalar.

* Added test for noop.

* - further work on clipbynorm_bp

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* - get rid of concat op call, use instead direct concat helper call

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* lstmBlockCell context fix

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* Added tests for lrelu and lrelu_bp.

* Added tests for selu and selu_bp.

* Fixed lrelu derivative helpers.

* - some corrections in lstm

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* operator * result shape fix

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* - correct typo in lstmCell

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* few tests fixed

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* CUDA inverse broadcast bool fix

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* disable MMAP test for CUDA

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* BooleanOp syncToDevice

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* meh

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* additional data types for im2col/col2im

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* Added test for firas_sparse op.

* one more RandomBuffer test excluded

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* Added tests for flatten op.

* Added test for Floor op.

* bunch of tests fixed

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* mmulDot tests fixed

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* more tests fixed

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* Implemented floordiv_bp op and tests.

* Fixed scalar case with cuda implementation for bds.

* - work on cuda kernel for clip_by_norm backprop op is completed

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* Eliminate cbow crach.

* more tests fixed

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* more tests fixed

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* Eliminated abortion with batched nlp test.

* more tests fixed

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* Fixed shared flag initializing.

* disabled bunch of cpu workspaces tests

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* scalar operators fix: missing registerSpecialUse call

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* Fixed logdet for cuda and tests.

* - correct clipBynorm_bp

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* Fixed crop_and_resize shape datatype.

* - correct some mmul tests

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* build fix

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* exclude two methods for JNI

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* exclude two methods for JNI

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* exclude two methods for JNI (#97)

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* temporary stack fix

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* downgrade jetty to latest stable version

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* test and profiles

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* Servlet skeleton

* one test case

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* one test case

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* compilation fix

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* draft improvements

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* draft improvements

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* proof of concept works

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* proof of concept works

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* Servlet

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* logging + simple timing

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* Content type fixed

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* Profile required

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* Servlet tests

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* Post test

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* Tests added:

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* Minor tweaks

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* Constants used

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* Check content type

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* Some tests

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* Errors checking

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* Constraints and tests

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* Minor tweaks

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* Dl4j servlet skeleton

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* Moving class to dl4j

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* Builder extended

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* initial dl4j commit

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* unirest version change

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* temp fallback

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* Reverted unirest version

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* Reverted unirest version

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* revert back unirest version change

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* revert unirest change

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* some additional checks in builder

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* few more fields

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* Test added

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* lombok

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* Tests added

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* deps

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* profiles re-introduced

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* Added tests

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* Model servlet

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* builders

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* builders

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* Servlet skeleton

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* Servlet tests

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* builders

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* get rid of old class

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* use PI for inference

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* superbuilder

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* get back builder

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* Servlet builder

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* PI setup

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* get rid of superbuilder

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* SameDiffServlet inheritance constructor

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* dl4jservlet attached to samediffservlet

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* builder types fix

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* dummy model

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* single out

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* loss

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* Tests added

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* missed builder type

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* working serving example

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* sd model fix

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* fix unirest version

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* Minor tests fixes

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* Tests fixed

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* Build fixed

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* Test added

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* Tests fixed

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* Ser/deser added

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* one more unirest fix

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* Custom serializers

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* Tests disabled

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* revert back unirest version change

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* update

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* some default fields values

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* some comments/javadoc

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* - move serde impls to client module
- get rid of INDArray serde for now

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* jackson-based serde for float[], double[] and String

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* more of basic ser/de + tests

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* minor api changes

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* change imports/signatures

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* Optional parralel inference

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* Insert pause between tests as workaround for unavailable port issue

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* few unused imports removed

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* Models usage

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* Models usage

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* - InputAdapter + OutputAdapter = InferenceAdapter
- JsonModelServer now allows separate configuration of InputAdapter and OutputAdapter

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* unused import

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* input adapter..

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* minor signature change

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* few more signatures updated

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* input/output adapter

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* Tests added

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* javadocs added

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* Test fixed

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* minor polishing

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* more of javadoc

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* signature change

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raver119 added a commit to SkymindIO/deeplearning4j that referenced this issue Aug 14, 2019
[WIP] multi-device support (#80)
* fix pad javadoc and @see links. (#72)

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* [WIP] More fixes (#73)

* special tests for ConstantTadHelper/ConstantShapeHelper

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* release methods for data buffers

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* delete temporary buffer Java side

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* delete temporary buffer Java side

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* delete temporary TadPack C++/Java side (#74)

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* Zoo model TF import test updates (#75)

* argLine fix, update compression_gru comment

* updated comment for xception

* undid but commented argLine change

* updated xlnet comment

* copyright headers

* - new NDArray methods like()/ulike() (#77)

- fix for depthwise_conv2d_bp + special test

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* upsampling2d fix CUDA

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* DL4J trace logging (#79)

* MLN/CG trace logging for debugging

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* Tiny tweak

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* strided_slice_bp shape fn leak fix

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* SameDiff fixes and naming (#78)

* remove SDVariable inplace methods

* import methods

* npe fix in OpVal

* removed SameDiff inplace ops from tests

* Naming updates, moved to centralized methods in SameDiff, should use op_#:# for everything

* quick fixes

* javadoc

* SDVariable eval with placeholders

* use regex match

* better matching

* initial commit

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* initial commit

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* fix javadoc. (#76)

* fix javadoc.

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* replace most @see with @link s.

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* 4 additional tests

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* launch context reorganization

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* LaunchContext reorganization

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* per-device LaunchContext

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* Various DL4J/ND4J fixes (#81)

* eclipse#7954 Force refresh of UI when switching tabs on overview page

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* eclipse#8017 Concurrent modification exception (synchronize) fix

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* eclipse#8033 Don't initialize updater in middle of writing memory crash dump

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* eclipse#8208 Fix shape checks for ND4J int[] creator methods

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* eclipse#6385 eclipse#7992 Keras import naming fixes + cleanup

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* eclipse#8016 Upsampling3D - add NDHWC format support

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* ContextBuffers as separate entity

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* Refactor NativeOps.h to export C functions

* Actually export functions from NativeOps.h

* Adapt the Java wrappers in ND4J generated with JavaCPP

* Create C wrappers for some of the C++ classes currently used by ND4J

* ContextBuffers as separate entity

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* remove duplicate code in createBufferDetached. (#83)

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* Keras model import - updater lr fix (#84)

* Keras model import - updater lr fix

Signed-off-by: eraly <susan.eraly@gmail.com>

* Keras model import - updater lr fix, cleanup

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* ContextBuffers as separate entity

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* ContextBuffers as separate entity

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* Fix functions of OpaqueVariablesSet

* thread-local buffers/affinity

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* thread safety for LaunchContext

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* more of thread safety

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* one more multi threaded test

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* SameDiff Convolution Config validation, better output methods (#82)

* Conv Config validation & tests

Signed-off-by: Ryan Nett <rnett@skymind.io>

* stackOutputs utility method

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* use constructor for validation, support negative kernel sizes (infered from weights)

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* better output methods

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* move output to be with fit and evaluate

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* fixes

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* more fixes

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* refactor duplicate code from pad methods. (#86)

* refactor duplicate code from pad methods.

Signed-off-by: Robert Altena <Rob@Ra-ai.com>

* replace switch with if.

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* Various ND4J/DL4J fixes and improvements (#87)

* Reshape and reallocate - small fixes

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* Reshape and reallocate - small fixes

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* eclipse#6488 ElementWiseVertex broadcast support

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* Constructors and broadcast supported it Transforms.max/min

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* eclipse#8054 ElementWiseVertex now supports broadcast inputs

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* eclipse#8057 Nd4j.create overload dtype fix

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* eclipse#7551 ND4J Shape validation fix

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* [WIP] Numpy boolean import (#91)

* numpy bool type

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* numpy bool java side

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* remove create method with unused parameter. (#89)

* remove create method with unused parameter.

* removed more unused methods.

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* removing more unused code.

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* last removal of unused code.

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* remove createSparse methods. (#92)

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* Various ND4J/DL4J fixes (#90)

* Deprecate Old*Op instances

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* eclipse#8063 eclipse#8054 Broadcast exceptions + cleanup inplace ops

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* Small fix

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* Remove bad test condition

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* eclipse#7993 Fix shape function issue in crop_and_resize op

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* DL4J SameDiff lambda layer fix

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* eclipse#8029 Fix for pnorm backprop math

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* eclipse#8038 Fix Op profiler NaN/Inf triggering + add tests (#93)

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* createUninitializedDetached refactoring. (#94)

* wip

* update interface, add null implementations.

* Breaking one test in a weird way.

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* createUninitializedDetached refactored.

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* cuda build fix for issues introduced by recent refactoring

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* [WIP] More of CUDA (#95)

* initial commit

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* Implementation of hashcode cuda helper. Working edition.

* Fixed parallel test input arangements.

* Fixed tests for hashcode op.

* Fixed shape calculation for image:crop_and_resize op and test.

* NativeOps tests. Initial test suite.

* Added tests for indexReduce methods.

* Added test on execBroadcast with NDArray as dimensions.

* Added test on execBroadcastBool with NDArray as dimensions.

* Added tests on execPairwiseTransform and execPairwiseTransofrmBool.

* Added tests for execReduce with scalar results.

* Added reduce tests for non-empty dims array.

* Added tests for reduce3.

* Added tests for execScalar.

* Added tests for execSummaryStats.

* - provide cpu/cuda code for batch_to_space
- testing it

Signed-off-by: Yurii <yurii@skymind.io>

* - remove old test for batch_to_space (had wrong format and numbers were not checked)

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* Fixed complilation errors with test.

* Added test for execTransformFloat.

* Added test for execTransformSame.

* Added test for execTransformBool.

* Added test for execTransformStrict.

* Added tests for execScalar/execScalarBool with TADs.

* Added test for flatten.

* - provide cpu/cuda code for space_to_Batch operaion

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* Added test for concat.

* comment unnecessary stuff in s_t_b

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* Added test for specialConcat.

* Added tests for memcpy/set routines.

* Fixed pullRow cuda test.

* Added pullRow test.

* Added average test.

* - correct typo in NDArray::applyPairwiseTransform(nd4j::pairwise::BoolOps op...)

Signed-off-by: Yurii <yurii@skymind.io>

* - debugging and fixing cuda tests in JavaInteropTests file

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* - correct some tests

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* Added test for shuffle.

* Fixed ops declarations.

* Restored omp and added shuffle test.

* Added convertTypes test.

* Added tests for execRandom. Eliminated usage of RandomBuffer with NativeOps.

* Added sort tests.

* Added tests for execCustomOp.

* - further debuging and fixing tests terminated with crash

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* Added tests for calculateOutputShapes.

* Addded Benchmarks test.

* Commented benchmark tests.

* change assertion

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* Added tests for apply_sgd op. Added cpu helper for that op.

* Implement cuda helper for aplly_sgd op. Fixed tests for NativeOps.

* Added test for assign broadcastable.

* Added tests for assign_bp op.

* Added tests for axpy op.

* - assign/execScalar/execTransformAny signature change
- minor test fix

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* Fixed axpy op.

* meh

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* - fix tests for nativeOps::concat

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* sequential transform/scalar

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* allow nested parallelism

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* assign_bp leak fix

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* block setRNG fix

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* enable parallelism by default

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* enable nested parallelism by default

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* Added cuda implementation for row_count helper.

* Added implementation for tnse gains op helper.

* - take into account possible situations when input arrays are empty in reduce_ cuda stuff

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* Implemented tsne/edge_forces op cuda-based helper. Parallelized cpu-based helper for edge_forces.

* Added kernel for tsne/symmetrized op heleper.

* Implementation of tsne/symmetrized op cuda helper. Working edition.

* Eliminated waste printfs.

* Added test for broadcastgradientargs op.

* host-only fallback for empty reduce float

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* - some tests fixes

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* - correct the rest of reduce_ stuff

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* - further correction of reduce_ stuff

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* Added test for Cbow op. Also added cuda implementation for cbow helpers.

* - improve code of stack operation for scalar case

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* - provide cuda kernel for gatherND operation

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* Implementation of cbow helpers with cuda kernels.

* minor tests tweaks

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* minor tests tweaks

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* - further correction of cuda stuff

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* Implementatation of cbow op helper with cuda kernels. Working edition.

* Skip random testing for cudablas case.

* lstmBlockCell context fix

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* Added tests for ELU and ELU_BP ops.

* Added tests for eq_scalar, gt_scalar, gte_scalar and lte_scalar ops.

* Added tests for neq_scalar.

* Added test for noop.

* - further work on clipbynorm_bp

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* - get rid of concat op call, use instead direct concat helper call

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* lstmBlockCell context fix

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* Added tests for lrelu and lrelu_bp.

* Added tests for selu and selu_bp.

* Fixed lrelu derivative helpers.

* - some corrections in lstm

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* operator * result shape fix

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* - correct typo in lstmCell

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* few tests fixed

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* CUDA inverse broadcast bool fix

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* disable MMAP test for CUDA

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* BooleanOp syncToDevice

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* meh

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* additional data types for im2col/col2im

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* Added test for firas_sparse op.

* one more RandomBuffer test excluded

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* Added tests for flatten op.

* Added test for Floor op.

* bunch of tests fixed

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* mmulDot tests fixed

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* more tests fixed

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* Implemented floordiv_bp op and tests.

* Fixed scalar case with cuda implementation for bds.

* - work on cuda kernel for clip_by_norm backprop op is completed

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* Eliminate cbow crach.

* more tests fixed

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* more tests fixed

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* Eliminated abortion with batched nlp test.

* more tests fixed

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* Fixed shared flag initializing.

* disabled bunch of cpu workspaces tests

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* scalar operators fix: missing registerSpecialUse call

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* Fixed logdet for cuda and tests.

* - correct clipBynorm_bp

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* Fixed crop_and_resize shape datatype.

* - correct some mmul tests

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* build fix

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* exclude two methods for JNI

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* exclude two methods for JNI

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* exclude two methods for JNI (#97)

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* temporary stack fix

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* round robin affinity test

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* get rid of legacy CudaContext methods

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* get rid of legacy ContextPool classes/methods

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* one legacy test removed

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* few more fields rearranged

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* OpaqueLaunchContext

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* OpaqueLaunchContext++

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* more of OpaqueLaunchContext methods

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* LaunchContext -> CudaContext

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* AffinityManger changes

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* AffinityManger changes

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* cusolver handles

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* typo

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* cusolver method

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* cusolver handle propagated

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* blas/solver handles

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* one more test

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* legacy concat implementations replaced with new CustomOp

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* one more test

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* concat now uses way more blocks

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* print

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* no more triple template mmul

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* bunch of kernels have dtypes reconsidered

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* bunch of kernels have dtypes reconsidered

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* bitonic sort reorganized

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* bunch of cpu stuff removed from cuda scope

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* bunch of cpu stuff removed from cuda scope

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* type conversions moved to generic impl

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* cpu data types pass

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* non_max_suppression

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* sortByValue fix

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* ignore all mixed datatype tests for mmul

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* special handling of OpProfiler exceptions

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* - one failing concat test in cpp
- Nd4j.tile now uses op internally

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* get back dtype exception for legacy arrays deserialization

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