From 503bf2edc1d2e28826107304ce67cb89af620580 Mon Sep 17 00:00:00 2001 From: matuskalas Date: Fri, 14 Oct 2016 22:48:35 +0200 Subject: [PATCH] Updates of formats --- EDAM_dev.owl | 39 +++++++++++++++++++++++++++++++++++---- 1 file changed, 35 insertions(+), 4 deletions(-) diff --git a/EDAM_dev.owl b/EDAM_dev.owl index d41f07f..7e0345b 100644 --- a/EDAM_dev.owl +++ b/EDAM_dev.owl @@ -113,7 +113,7 @@ Example 'Example' concept property ('example' metadata tag) lists examples of valid values of types of identifiers (accessions). Applicable to some other types of data, too. true - Separated by bar ('|'). + Separated by bar ('|'). For more complex data and data formats, it can be a link to a website with examples, instead. concept_properties @@ -207,6 +207,17 @@ true + + + + + + Ontology used + 'Ontology used' concept property ('ontology_used' metadata tag) of format concepts links to a domain ontology that is used inside the given data format, or contains a note about ontology use within the format. + concept_properties + true + + @@ -27558,8 +27569,9 @@ Generic Feature Format version 3 (GFF3) of sequence features. - - + + + @@ -29600,6 +29612,13 @@ + + + + + + + Any ontology allowed, none mandatory. Preferrably with URIs but URIs are not mandatory. Non-ontology terms are also allowed as the last resort in case of a lack of suitable ontology. @@ -30783,6 +30802,11 @@ 'GTrack' belongs to the 'BioXSD|GTrack' ecosystem of generic formats, and particular to its subset, the 'GTrack ecosystem' (GTrack, GSuite, BTrack). 'GTrack' is the tabular format for representing features of sequences and genomes. + + + + + @@ -33526,6 +33550,8 @@ experiments employing a combination of technologies. + + @@ -33591,6 +33617,8 @@ experiments employing a combination of technologies. + + @@ -33651,7 +33679,10 @@ experiments employing a combination of technologies. 'GSuite' belongs to the 'BioXSD|GTrack' ecosystem of generic formats, and particular to its subset, the 'GTrack ecosystem' (GTrack, GSuite, BTrack). 'GSuite' is the tabular format for an annotated collection of individual GTrack files. - + + + +