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Submodule SeqLib
updated
23 files
| +3 −4 | .gitmodules | |
| +1 −1 | Makefile.am | |
| +14 −11 | Makefile.in | |
| +19 −0 | SeqLib/BWAWrapper.h | |
| +27 −2 | SeqLib/BamReader.h | |
| +25 −14 | SeqLib/BamRecord.h | |
| +14 −3 | SeqLib/BamWriter.h | |
| +4 −1 | SeqLib/FastqReader.h | |
| +7 −4 | SeqLib/GenomicRegion.h | |
| +5 −0 | SeqLib/ReadFilter.h | |
| +32 −0 | SeqLib/ThreadPool.h | |
| +16 −3 | SeqLib/UnalignedSequence.h | |
| +1 −1 | autogen.sh | |
| +96 −95 | configure | |
| +87 −48 | src/BWAWrapper.cpp | |
| +15 −3 | src/BamReader.cpp | |
| +19 −0 | src/BamRecord.cpp | |
| +11 −0 | src/BamWriter.cpp | |
| +2 −0 | src/FastqReader.cpp | |
| +9 −3 | src/GenomicRegion.cpp | |
| +90 −38 | src/Makefile.in | |
| +20 −13 | src/ReadFilter.cpp | |
| +20 −10 | src/seqtools/Makefile.in |