A manuscript on the protocol on chronic recording from Neuropixels probes
Final repository for GS specific residue analysis for ATP5G1 project
ImageJ plug-in to quantify the enrichment of a certain protein on actin filaments
Efficient python code for running ridge regression with cross validation
Simulations code for Antonini et al
Accompanying code for Shapiro et al. 2019
To track cell and measure PercevalHR fluorescence intensity
code to generate data and figures for "Topological Constraints In The Origin of Adaptive Specialization"
Code to reproduce analysis and figures for scRNA-seq analysis of the ventroposterior hypothalamus in Mickelsen et. al 2020
code for second PPiSeq paper
FIJI macros and python scripts to quantify and analyse RV and AAV tracings
Code for "The transcriptomic response of cells to a drug combination is more than the sum of the responses to the monotherapies"
Supporting code for Pop et al., 2020
Tools for clustering neurons using synaptic connectivity
Microsoft Excel Gait analysis Add-in for videos digitized in Maxtraq
Associated code for Lu et al 2020 eLife ("Nonlinearities between inhibition and T-type calcium channel activity bidirectionally regulate thalamic oscillations")
Topology-driven analysis of protein-protein interaction networks detects functional genetic modules regulating reproductive capacity
scripts for running biteOscope and processing data
Fiji macros associated with processing data from Chen et al., eLife 2020.