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README.md

README.md

Operationalising the ELIXIR-GA4GH Cloud and AAI Driver Project

Project Number: 16

Research area alignment

  • ELIXIR Compute/Tools/Data/Interop GA4GH Cloud Work Stream ELIXIR Human Data (Rare Disease, Federated Data, CNV) ELIXIR Marine Metagenomics ELIXIR Proteomics

Team

Submitter: Susheel Varma

Proponent(s)

  • Susheel Varma

Lead(s)

  • Alexander Kanitz Ania Niewielska Yacine Khettab Marius Dieckmann

Nominated participant(s)

  • Alexander Kanitz / project lead & web development Ania Niewielska / software developer Marius Dieckmann / software developer & Kubernetes expert Yacine Khettab/ DevOps & container specialist

Expected outcomes

  • Development and Kubernetes-based deployment of a user-facing web client PoC, leveraging GA4GH Cloud API services to allow end-users to pick workflows, modify parameters, select input data, trigger workflow execution, query run status and access results. User identity manifestation via ELIXIR AAI/OIDC and controlled access to services via OAuth2. Official release to ELIXIR community and multi-site production-grade deployment of the user client and ELIXIR GA4GH cloud services planned for 2020.

Expected audience

  • Audience:
  • Web developers
  • DevOps

Useful skills:

  • Web development (preferably Python, Go and/or Angular)
  • REST microservices
  • Kubernetes
  • CI/CD
  • OpenID Connect / OAuth2 / AAI

Number of expected hacking days: 4

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