Merged
Conversation
First draft of Provenance page (your task).
Closed
korbinib
reviewed
Nov 14, 2022
| - Use RO-Crate profile for provenance | ||
| - Make use of tools and software that help you recording provenance in manual or automated way. Use: | ||
| - LIMS | ||
| - workflow management system (Kepler, Galaxy, Taverna, VisTrails). Provenance information embedded in such software or tools are usually available to users of the same tool or can be exported as separated file in several formats, such as RO-Crate. |
Collaborator
There was a problem hiding this comment.
worth to mention other workflow systems?
Collaborator
Author
There was a problem hiding this comment.
Maybe not here. I will add "such as" to show that these are only few examples. More workflow systems that KEEP TRACK OF PROVENANCE should be added to the tools table (I think).
Member
|
@supernord and @stain You might be interested in this page:) |
Co-authored-by: Korbinian Bösl <korbinian.bosl@uib.no>
Co-authored-by: Korbinian Bösl <korbinian.bosl@uib.no>
add links
add data provenance
add data provenance
add data provenance
add data provenance
add data provenance
add data provenance
Member
|
Thanks, @bedroesb -- we discussed this at hackathon. The introduction is great! I'll see if I can dig out my PROV introduction videoes that we teach to the MSc Data Science students. |
add galaxy as related tool assembly
bedroesb
reviewed
Nov 18, 2022
bedroesb
reviewed
Nov 18, 2022
Co-authored-by: Bert Droesbeke <44875756+bedroesb@users.noreply.github.com>
Co-authored-by: Bert Droesbeke <44875756+bedroesb@users.noreply.github.com>
bedroesb
approved these changes
Nov 18, 2022
add data provenance
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
First draft of Provenance page (your task).
Please, feel free to contribute.