FlyReg

A Fiji plugin for the automated 3D registration of fly (drosophila) embryos.

Publications

• Fuqua et al. (2020) Dense and pleiotropic regulatory information in a developmental enhancer, Nature
• Fuqua et al. (2021) An open-source semi-automated robotics pipeline for embryo immunohistochemistry, Sci. Rep.

Install

• Download Fiji
  • Not necessary if you already have Fiji on your computer
• Start Fiji
  • Install the FlyReg update site in Fiji: [ Help > Update > Manage Update Sites ]
• Restart Fiji

Fiji Update Site

https://sites.imagej.net/FlyReg/