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@hunt-genes @bioconda @biocore-ntnu @snakemake-workflows


  1. (beta) Performant Pythonic GenomicRanges

    Python 77 6

  2. The Nested Containment List for Python. Basically an immutable interval-tree that is silly fast for both construction and lookups.

    C 65 3

  3. Ultraperformant reimplementation of SICER

    Python 13 4

  4. Easily understand and debug method chains.

    Python 1

  5. Forked from kyleam/snakemake-mode

    Emacs support for Snakemake

    Emacs Lisp

  6. (Maintenance fork) Find the largest independent set of genetically unrelated samples

    C++ 2

677 contributions in the last year

Apr May Jun Jul Aug Sep Oct Nov Dec Jan Feb Mar Apr Mon Wed Fri

Contribution activity

April 2019

Created a pull request in bioconda/bioconda-recipes that received 1 comment

Update meta.yaml

ℹ️ Bioconda has finished the GCC7 migration. If you are dealing with C/C++ or Python package it can be that you need to rebuild other dependent pac…

+3 −3 1 comment

Created an issue in arq5x/bedtools2 that received 6 comments

bedtools intersect -v -s fails with self; should be empty, is not.

cat f1.bed chr1 1 2 a 0 + bedtools intersect -v -s -a f1.bed -b f1.bed chr1 1 2 a 0 + I expected the output to be empty. It works without the -s (…

11 contributions in private repositories Apr 8 – Apr 11

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