2024-03-20 23:59:06.234 UTC [194248] CONTEXT: SQL statement "CREATE INDEX idx_bingo_bingo_config ON source.molecule USING bingo_idx (mol_file COLLATE pg_catalog."default" bingo.molecule)" PL/pgSQL function source.uspupsertmolecule(character varying,character varying) line 114 at SQL statement 2024-03-20 23:59:06.942 UTC [194248] NOTICE: bingo.index: 252000 structures processed 2024-03-20 23:59:06.942 UTC [194248] CONTEXT: SQL statement "CREATE INDEX idx_bingo_bingo_config ON source.molecule USING bingo_idx (mol_file COLLATE pg_catalog."default" bingo.molecule)" PL/pgSQL function source.uspupsertmolecule(character varying,character varying) line 114 at SQL statement 2024-03-20 23:59:08.172 UTC [197922] LOG: execute : /*** Load all supported types ***/ SELECT ns.nspname, a.typname, a.oid, a.typrelid, a.typbasetype, CASE WHEN pg_proc.proname='array_recv' THEN 'a' ELSE a.typtype END AS type, CASE WHEN pg_proc.proname='array_recv' THEN a.typelem WHEN a.typtype='r' THEN rngsubtype ELSE 0 END AS elemoid, CASE WHEN pg_proc.proname IN ('array_recv','oidvectorrecv') THEN 3 /* Arrays last */ WHEN a.typtype='r' THEN 2 /* Ranges before */ WHEN a.typtype='d' THEN 1 /* Domains before */ ELSE 0 /* Base types first */ END AS ord FROM pg_type AS a JOIN pg_namespace AS ns ON (ns.oid = a.typnamespace) JOIN pg_proc ON pg_proc.oid = a.typreceive LEFT OUTER JOIN pg_class AS cls ON (cls.oid = a.typrelid) LEFT OUTER JOIN pg_type AS b ON (b.oid = a.typelem) LEFT OUTER JOIN pg_class AS elemcls ON (elemcls.oid = b.typrelid) LEFT OUTER JOIN pg_range ON (pg_range.rngtypid = a.oid) WHERE a.typtype IN ('b', 'r', 'e', 'd') OR /* Base, range, enum, domain */ (a.typtype = 'c' AND cls.relkind='c') OR /* User-defined free-standing composites (not table composites) by default */ (pg_proc.proname='array_recv' AND ( b.typtype IN ('b', 'r', 'e', 'd') OR /* Array of base, range, enum, domain */ (b.typtype = 'p' AND b.typname IN ('record', 'void')) OR /* Arrays of special supported pseudo-types */ (b.typtype = 'c' AND elemcls.relkind='c') /* Array of user-defined free-standing composites (not table composites) */ )) OR (a.typtype = 'p' AND a.typname IN ('record', 'void')) /* Some special supported pseudo-types */ ORDER BY ord 2024-03-20 23:59:08.175 UTC [197922] LOG: execute : /*** Load field definitions for (free-standing) composite types ***/ SELECT typ.oid, att.attname, att.atttypid FROM pg_type AS typ JOIN pg_namespace AS ns ON (ns.oid = typ.typnamespace) JOIN pg_class AS cls ON (cls.oid = typ.typrelid) JOIN pg_attribute AS att ON (att.attrelid = typ.typrelid) WHERE (typ.typtype = 'c' AND cls.relkind='c') AND attnum > 0 AND /* Don't load system attributes */ NOT attisdropped ORDER BY typ.oid, att.attnum 2024-03-20 23:59:08.176 UTC [197922] LOG: execute : /*** Load enum fields ***/ SELECT pg_type.oid, enumlabel FROM pg_enum JOIN pg_type ON pg_type.oid=enumtypid ORDER BY oid, enumsortorder 2024-03-20 23:59:08.525 UTC [197922] LOG: execute : call source.uspupsertmolecule('***SystemName***', 'FullLoad') 2024-03-20 23:59:18.107 UTC [197927] LOG: execute : SET extra_float_digits = 3 2024-03-20 23:59:18.108 UTC [197927] LOG: execute : SET application_name = 'PostgreSQL JDBC Driver' 2024-03-20 23:59:26.339 UTC [197940] LOG: execute : SET extra_float_digits = 3 2024-03-20 23:59:26.340 UTC [197940] LOG: execute : SET application_name = 'PostgreSQL JDBC Driver' 2024-03-20 23:59:28.773 UTC [197922] WARNING: build engine: error while processing record with ctid='(147,5)'::tid: CMF saver: stereogroup number 8 out of range 2024-03-20 23:59:28.773 UTC [197922] CONTEXT: SQL statement "CREATE INDEX idx_bingo_bingo_config ON source.molecule USING bingo_idx (mol_file COLLATE pg_catalog."default" bingo.molecule)" PL/pgSQL function source.uspupsertmolecule(character varying,character varying) line 114 at SQL statement 2024-03-20 23:59:28.773 UTC [197922] LOG: could not send data to client: Connection reset by peer 2024-03-20 23:59:28.773 UTC [197922] CONTEXT: SQL statement "CREATE INDEX idx_bingo_bingo_config ON source.molecule USING bingo_idx (mol_file COLLATE pg_catalog."default" bingo.molecule)" PL/pgSQL function source.uspupsertmolecule(character varying,character varying) line 114 at SQL statement 2024-03-20 23:59:28.773 UTC [197922] STATEMENT: call source.uspupsertmolecule('***SystemName***', 'FullLoad') 2024-03-20 23:59:28.773 UTC [197922] FATAL: connection to client lost 2024-03-20 23:59:28.773 UTC [197922] CONTEXT: SQL statement "CREATE INDEX idx_bingo_bingo_config ON source.molecule USING bingo_idx (mol_file COLLATE pg_catalog."default" bingo.molecule)" PL/pgSQL function source.uspupsertmolecule(character varying,character varying) line 114 at SQL statement 2024-03-20 23:59:28.773 UTC [197922] STATEMENT: call source.uspupsertmolecule('***SystemName***', 'FullLoad') corrupted double-linked list 2024-03-20 23:59:33.187 UTC [197960] LOG: statement: select version();select current_setting('max_index_keys') 2024-03-20 23:59:33.373 UTC [197961] LOG: statement: select version();select current_setting('max_index_keys') 2024-03-20 23:59:33.413 UTC [197961] LOG: statement: call source.uspupsertlot('***SystemName***', 'FullLoad'); select 1 AS T 2024-03-20 23:59:45.901 UTC [197978] LOG: execute : SET extra_float_digits = 3 2024-03-20 23:59:45.902 UTC [197978] LOG: execute : SET application_name = 'PostgreSQL JDBC Driver' 2024-03-20 23:59:47.122 UTC [1002] LOG: server process (PID 197922) was terminated by signal 6: Aborted 2024-03-20 23:59:47.122 UTC [1002] LOG: terminating any other active server processes 2024-03-20 23:59:47.123 UTC [197978] WARNING: terminating connection because of crash of another server process 2024-03-20 23:59:47.123 UTC [197978] DETAIL: The postmaster has commanded this server process to roll back the current transaction and exit, because another server process exited abnormally and possibly corrupted shared memory. 2024-03-20 23:59:47.123 UTC [197978] HINT: In a moment you should be able to reconnect to the database and repeat your command. 2024-03-20 23:59:47.123 UTC [197940] WARNING: terminating connection because of crash of another server process 2024-03-20 23:59:47.123 UTC [197940] DETAIL: The postmaster has commanded this server process to roll back the current transaction and exit, because another server process exited abnormally and possibly corrupted shared memory. 2024-03-20 23:59:47.123 UTC [197940] HINT: In a moment you should be able to reconnect to the database and repeat your command. 2024-03-20 23:59:47.124 UTC [197961] WARNING: terminating connection because of crash of another server process 2024-03-20 23:59:47.124 UTC [197961] DETAIL: The postmaster has commanded this server process to roll back the current transaction and exit, because another server process exited abnormally and possibly corrupted shared memory. 2024-03-20 23:59:47.124 UTC [197961] HINT: In a moment you should be able to reconnect to the database and repeat your command. 2024-03-20 23:59:47.124 UTC [197961] CONTEXT: SQL statement "UPDATE source.lot : SET extra_float_digits = 3 2024-03-21 00:00:06.629 UTC [198052] LOG: execute : SET application_name = 'PostgreSQL JDBC Driver' 2024-03-21 00:00:06.648 UTC [198053] LOG: execute : SET extra_float_digits = 3 2024-03-21 00:00:06.649 UTC [198053] LOG: execute : SET application_name = 'PostgreSQL JDBC Driver' 2024-03-21 00:00:06.660 UTC [198054] LOG: execute : SET extra_float_digits = 3 2024-03-21 00:00:06.661 UTC [198054] LOG: execute : SET application_name = 'PostgreSQL JDBC Driver' 2024-03-21 00:00:08.250 UTC [198056] LOG: statement: select version();select current_setting('max_index_keys') 2024-03-21 00:00:09.081 UTC [198057] LOG: statement: select version();select current_setting('max_index_keys') 2024-03-21 00:00:09.281 UTC [198057] LOG: statement: call projects.uspupsertassaypermission('***SystemName***', 'FullLoad'); select 1 AS T