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Forked from biopython/biopython
Evan Parker's git fork for development
Various scripts used as prototypes
Dependency free XML file indexing and iterative reading for Python
FASTA format file storage, validation, and scrubbing + integrated proteolytic analysis.
This is a python class and set of helper functions to estimate the activity of proteolytic enzymes via the abundance of endogenous peptides.
PepEx is a proteomics/peptidomics visualization tool that allows the representation of quantitative alignments.