From c2dcaf9d30b08ea0ec668393d5864a688a3c856e Mon Sep 17 00:00:00 2001 From: CarmenTamayo Date: Tue, 28 May 2024 09:59:34 +0100 Subject: [PATCH] Update inst/rmarkdown/templates/transmissibility/skeleton/rmdchunks/EpiNow2.Rmd Co-authored-by: Hugo Gruson <10783929+Bisaloo@users.noreply.github.com> --- .../templates/transmissibility/skeleton/rmdchunks/EpiNow2.Rmd | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/inst/rmarkdown/templates/transmissibility/skeleton/rmdchunks/EpiNow2.Rmd b/inst/rmarkdown/templates/transmissibility/skeleton/rmdchunks/EpiNow2.Rmd index 0ad7637..87bb26d 100644 --- a/inst/rmarkdown/templates/transmissibility/skeleton/rmdchunks/EpiNow2.Rmd +++ b/inst/rmarkdown/templates/transmissibility/skeleton/rmdchunks/EpiNow2.Rmd @@ -110,7 +110,7 @@ These analyses present results for stratified incidence, i.e., by `r group_var`. res_epinow2_group <- dat_i_day %>% select("date_index", "region", "count") %>% dplyr::rename( - confirm = .data[["count"]], + confirm = count, date = date_index, region = .data[[group_var]] ) %>%