epivizrChart

Add interactive charts and dashboards for genomic data visualization into RMarkdown and HTML documents using the epiviz framework. The epivizrChart package provides an API to interactively create and manage web components that encapsulate epiviz charts. Charts can be embedded in R markdown/notebooks to create interactive documents. Epiviz Web components are built using the Google Polymer library.

Installation and requirements

# using Bioconductor
if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("epiviz/epivizrChart")

# or using remotes
remotes::install_github("epiviz/epivizrChart")

Generating interactive Markdown Documents

The easiest way to try epivizrChart is to knit the package vignette

require(epivizrChart)
browseVignettes("epivizrChart")

Resources

• Documentation on the Epiviz web component library can be found here: https://epiviz.github.io/polymer/charts/components/epiviz-charts/

• The repository for the Epiviz web component library itself is here: https://github.com/epiviz/epiviz-chart