evanbiederstedt

Pinned repositories

1. NCBI-Hackathons/NovoGraph

   NovoGraph: building whole genome graphs from long-read-based de novo assemblies

   Perl 20 1

2. mskilab/gTrack

   R package for visualizing complex and multi-track 1D and 2D genomic data in GenomicRanges framework

   R 11 5

3. mskilab/JaBbA

   MIP based joint inference of copy number and rearrangement state in cancer whole genome sequence data.

   R 8 5

4. mskilab/gUtils

   Utility functions to extend and optimize GenomicRanges functionality.

   R 3 3

5. NCBI-Hackathons/Tumor_sim

   Simulation of Tumor Genomes -- Initiated at the 2017 NYGC-NCBI Hackathon

   Python 2 5

6. mskilab/Flow

   R-based genomics workflow management

   R 3 3