evast/transmart-xnat-importer-plugin

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Aug 10, 2015 Update README.md
	1	The TranSMART-XNAT-Importer plugin can import clinical image-derived data from XNAT and store them in TranSMART.
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	3	![alt tag](https://raw.github.com/evast/transmart-xnat-importer-plugin/master/docs/navigator.png)
	4	XNAT Data hierarchy shown in TranSMART ontology.
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	6	TranSMART-XNAT Coupling
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	7	----------
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	9	TranSMART (http://transmartfoundation.org) is a data integration and browsing platform for central statistical analysis in translational research.
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	11	XNAT (www.xnat.org) is a framework to store, share and manage medical imaging data. This imaging archive can be connected to a computing cluster for further image analyses. After analyses of the images, the analysis results (e.g. grey matter volumes) can be stored back in XNAT.
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Aug 10, 2015 Update README.md
	13	To correlate the image-derived results with other medical data, such as demographic or genetic data, it would be useful to import the XNAT results in TranSMART. To this end, we developed the TranSMART-XNAT-Importer plugin. To configure which XNAT image-derived data is imported in TranSMART, an administrator can create a coupling configuration in the online administration panel and start the import process. The plugin uses the default ETL Importer for clinical data to import the XNAT results in TranSMART.
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	15	Documentation and Installation
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	18	More information about the plugin and installation instructions can be found in [TranSMART-XNAT-Importer-plugin-manual.pdf](https://github.com/evast/transmart-xnat-importer-plugin/blob/master/docs/TranSMART-XNAT-Importer-plugin-manual.pdf?raw=true) in the directory docs. A user-guide to import data with step-by-step instructions and screenshots can be found in the same document.