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MethylQTL

mQTL mapping in bisulfite sequencing studies by fitting a binomial mixed model, incorporating allelic-specific methylation pattern.

Installation

It is easy to install the development version of MethylQTL package using the 'devtools' package.

library(devtools)
install_github("3211895/MethylQTL")

Usage

The main function is methylqtl. You can find the instructions and an example by '?methylqtl'.

Example:

data(ExampleData)
res=methylqtl(geno,data,K)

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