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Farhat Laboratory

TB Genetics Bioinformatics
  • Boston, MA

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  1. wdnn Public

    Wide and Deep Neural Net for predicting TB resistance from genotypic data

    Python 10 11

  2. The genTB project, the Django site, variant calling and prediciton pipeline, and mapping pipeline with hooks to two ravens

    HTML 6 11

  3. megapipe Public

    A wrapper pipe for variant calling and genome assembly for M.tuberculosis

    Python 3

  4. Download biosample and SRA runinfo metadata from NCBI

    Python 3


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