name taxID taxRank genomeSize numReads numUniqueReads abundance root 1 no rank 0 8 0 0 Bacteria 2 superkingdom 0 14 0 0 Buchnera aphidicola 9 species 619958 198 132 0 Cellulomonas gilvus 11 species 3526441 1 0 0 Pelobacter carbinolicus 19 species 3665893 1 0 0 Myxococcales 29 order 9744470 18 0 0 Myxococcaceae 31 family 9924679 1 0 0 Myxococcus fulvus 33 species 10026214 2 0 0 Stigmatella aurantiaca 41 species 10260756 6 0 0 Archangium gephyra 48 species 12489432 43 36 0 Chondromyces 50 genus 0 1 0 0 Chondromyces crocatus 52 species 11388132 27 20 0 Caulobacter 75 genus 4238499 2 0 0 Hyphomicrobium 81 genus 3700497 1 0 0 Hyphomonas 85 genus 3705021 1 0 0 Leptothrix 88 genus 4909403 2 0 0 Gallionella 96 genus 3162471 1 0 0 Runella slithyformis 106 species 6919729 1 0 0 Planctomycetales 112 order 6682242 2 0 0 Spirochaetaceae 137 family 2844607 1 0 0 Borreliella burgdorferi 139 species 1329613 27 0 0 Treponema 157 genus 2625101 1 0 0 Leptospira interrogans 173 species 5395453 55 38 0 Azospirillum brasilense 192 species 13978806 26 16 0 Azospirillum lipoferum 193 species 7223069 3 0 0 Campylobacter coli 195 species 1776238 224 85 0 Campylobacter fetus 196 species 1876301 15 13 0 Campylobacter jejuni 197 species 2513821 207 86 0 Campylobacter concisus 199 species 2099413 150 39 0 Campylobacter lari 201 species 1578293 42 5 0 Helicobacter pylori 210 species 1704012 202 115 0 Alteromonas 226 genus 4604571 1 0 0 Brucella 234 genus 4068975 93 87 0 Flavobacterium 237 genus 3461015 2 0 0 Francisella tularensis 263 species 2819748 68 50 0 Francisella tularensis subsp. novicida 264 subspecies 3841706 12 6 0 Paracoccus 265 genus 5054656 3 0 0 Thermus 270 genus 2279019 1 0 0 Thermus thermophilus 274 species 2214494 4 0 0 Comamonas testosteroni 285 species 5695231 8 0 0 Pseudomonas 286 genus 6119631 139 96 0 Pseudomonas aeruginosa 287 species 6506218 120 90 0 Burkholderia cepacia 292 species 7851492 118 9 8.58E-15 Pseudomonas fluorescens 294 species 6526868 445 43 4.73E-10 Pseudomonas fragi 296 species 5101809 19 9 3.95E-16 Pseudomonas mendocina 300 species 5293211 25 0 0 Pseudomonas putida 303 species 6146834 46 18 0 Ralstonia solanacearum 305 species 5652444 59 12 6.59E-15 Pseudomonas stutzeri 316 species 4548207 545 168 1.49E-08 Pseudomonas syringae 317 species 6129101 26 0 0 Ralstonia pickettii 329 species 6378979 17 0 0 Pseudomonas pseudoalcaligenes 330 species 4686340 49 0 0 Burkholderia glumae 337 species 7333967 327 10 0 Xanthomonas campestris 339 species 7516154 10 3 0 Xanthomonas campestris pv. campestris 340 leaf 14898506 44 3 0 Xanthomonas citri 346 species 17318955 10 0 0 Xanthomonas oryzae 347 species 17545599 15 6 0 Azotobacter 352 genus 5311796 2 0 0 Azotobacter chroococcum 353 species 5192286 23 0 0 Azotobacter vinelandii 354 species 5351632 29 0 0 Rhizobiales 356 order 5103979 1 0 0 Agrobacterium 357 genus 6422834 1 0 0 Agrobacterium tumefaciens 358 species 7273300 16 4 0 Bradyrhizobium 374 genus 11894480 10 1 0 Bradyrhizobium japonicum 375 species 9207384 15 0 0 Bradyrhizobium sp. 376 species 7547693 26 19 0 Rhizobium 379 genus 6989816 5 5 0 Sinorhizobium meliloti 382 species 6995610 9 7 0 Rhizobium leguminosarum 384 species 7129833 81 30 0 Sinorhizobium fredii NGR234 394 leaf 6891900 12 7 0 Rhizobium phaseoli 396 species 87841097 29 0 0 Rhizobium tropici 398 species 6686334 1 0 0 Methylobacillus flagellatus 405 species 2971517 7 0 0 Methylobacterium 407 genus 6606092 11 5 0 Methylobacterium extorquens 408 species 6163878 22 0 0 Methylomonas 416 genus 5051681 4 0 0 Acetobacter 434 genus 3251215 2 0 0 Acetobacter pasteurianus 438 species 3251215 40 19 0 Gluconobacter oxydans 442 species 3207017 9 2 0 Legionellaceae 444 family 5886419 1 0 0 Legionella 445 genus 5886419 1 0 0 Legionella pneumophila 446 species 6459328 228 107 0 Legionella hackeliae 449 species 3570857 43 39 0 Tatlockia micdadei 451 species 3310028 43 41 0 Acinetobacter 469 genus 4000822 4 0 0 Acinetobacter baumannii 470 species 3994952 560 125 1.14E-10 Moraxella 475 genus 1863286 6 0 0 Moraxella catarrhalis 480 species 1863286 49 15 0 Neisseria gonorrhoeae 485 species 2209297 24 0 0 Neisseria meningitidis 487 species 2222288 85 12 2.11E-10 Psychrobacter 497 genus 2875899 7 1 0 Kingella kingae 504 species 2140065 19 10 0 Alcaligenes faecalis 511 species 4248684 17 12 0 Bordetella 517 genus 4292418 3 0 0 Bordetella bronchiseptica 518 species 5231793 59 14 0 Bordetella parapertussis 519 species 4836562 23 0 0 Bordetella pertussis 520 species 4098210 40 5 0 Ochrobactrum anthropi 529 species 5205777 8 2 0 Beijerinckia 532 genus 4418616 2 0 0 Beijerinckia indica 533 species 4418616 1 0 0 Zymomonas mobilis 542 species 2426073 16 11 0 Enterobacteriaceae 543 family 6578171 7 1 0 Citrobacter 544 genus 5356580 1 0 0 Citrobacter freundii 546 species 5371331 110 36 3.94E-15 Enterobacter 547 genus 6476723 19 1 0 [Enterobacter] aerogenes 548 species 5435727 63 11 0 Pantoea agglomerans 549 species 9924054 38 34 0 Enterobacter cloacae 550 species 5160721 175 28 0 Erwinia amylovora 552 species 3869718 1 0 0 Pantoea ananatis 553 species 4838981 6 1 0 Escherichia 561 genus 7192399 1 0 0 Escherichia coli 562 species 7253110 387 129 3.24E-10 Escherichia fergusonii 564 species 4643861 3 0 0 Hafnia alvei 569 species 4712721 89 73 0 Klebsiella 570 genus 8076027 1 1 0 Klebsiella oxytoca 571 species 6684898 95 29 0 Klebsiella pneumoniae 573 species 8447597 150 41 0 Morganella morganii 582 species 3799539 16 2 0 Proteus mirabilis 584 species 3973324 567 420 0 Proteus vulgaris 585 species 3794983 79 0 0 Providencia rettgeri 587 species 4889093 45 41 0 Providencia stuartii 588 species 4402109 66 23 0 Salmonella enterica subsp. enterica serovar Thompson 600 leaf 9410065 3 0 0 Serratia 613 genus 5310972 4 2 0 Serratia liquefaciens 614 species 5282719 35 7 0 Serratia marcescens 615 species 5135686 62 14 0 Shigella 620 genus 4815334 8 0 0 Shigella boydii 621 species 4760589 39 1 1.71E-16 Shigella flexneri 623 species 4787214 15 0 1.89E-16 Shigella sonnei 624 species 5137894 37 3 4.99E-16 Yersinia enterocolitica 630 species 4717877 241 111 1.54E-25 Yersinia intermedia 631 species 4859749 30 23 0 Yersinia pestis 632 species 5868073 44 14 0 Yersinia pseudotuberculosis 633 species 7671089 42 6 0 Edwardsiella tarda 636 species 3766483 60 55 0 Aeromonas 642 genus 4891101 4 0 0 Aeromonas hydrophila 644 species 4927671 262 38 9.48E-11 Aeromonas schubertii 652 species 4400034 20 7 0 Aeromonas veronii 654 species 4551783 132 51 0 Vibrio 662 genus 5034771 4 0 0 Vibrio alginolyticus 663 species 5146637 94 23 0 Vibrio cholerae 666 species 4424841 78 36 0 Aliivibrio fischeri 668 species 4273718 1 0 0 Vibrio harveyi 669 species 11920371 36 5 0 Vibrio parahaemolyticus 670 species 5172800 202 96 0 Vibrio vulnificus 672 species 5131516 169 57 0 Grimontia hollisae 673 species 3998273 118 116 0 Vibrio mimicus 674 species 8922704 64 36 0 Vibrio fluvialis 676 species 4827724 16 15 0 Vibrio natriegens 691 species 5168686 165 94 0 Plesiomonas shigelloides 703 species 3405979 36 31 0 Pasteurellaceae 712 family 2340871 22 0 0 Aggregatibacter actinomycetemcomitans 714 species 3173845 66 32 0 Actinobacillus pleuropneumoniae 715 species 2299903 2 0 0 Haemophilus 724 genus 1926881 1 0 0 Haemophilus influenzae 727 species 1901941 225 58 0 [Haemophilus] ducreyi 730 species 1698955 117 29 0 Aggregatibacter aphrophilus 732 species 4626291 35 22 0 [Haemophilus] parasuis 738 species 2269156 45 11 0 Pasteurella multocida 747 species 2309163 82 51 0 Rickettsiales 766 order 1283047 3 0 0 Bartonella bacilliformis 774 species 1445021 39 0 0 Rickettsiaceae 775 family 1287261 3 0 0 Coxiella burnetii 777 species 2067677 21 12 0 Ehrlichia ruminantium 779 species 2264626 1 0 0 Rickettsia 780 genus 1248224 1895 1874 0 Rickettsia prowazekii 782 species 1111192 33 22 0 Rickettsia rickettsii 783 species 1265141 8 3 0 Orientia tsutsugamushi 784 species 2068019 1 0 0 Bartonella quintana 803 species 1584515 1 0 0 Chlamydiaceae 809 family 1113937 2 0 0 Chlamydia 810 genus 1113937 13 0 0 Chlamydia trachomatis 813 species 1068120 25 16 0 Bacteroides 816 genus 5275069 1 0 0 Bacteroides fragilis 817 species 5308603 132 31 0 Bacteroides thetaiotaomicron 818 species 6293399 82 48 0 Campylobacter gracilis 824 species 2281652 13 13 0 Porphyromonas gingivalis 837 species 2339774 21 11 0 Prevotella 838 genus 3073878 5 4 0 Fusobacterium nucleatum 851 species 2948417 80 3 0 Desulfovibrio 872 genus 3918779 4 0 0 Desulfovibrio vulgaris str. Hildenborough 882 leaf 3773159 11 0 0 Desulfovibrio vulgaris str. 'Miyazaki F' 883 leaf 4040304 73 4 0 Desulfococcus 896 genus 3944167 1 0 0 Desulfococcus multivorans 897 species 4455399 26 17 0 Nitrobacter hamburgensis 912 species 5011522 5 0 0 Nitrobacter winogradskyi 913 species 3402093 2 0 0 Acidithiobacillus ferrooxidans 920 species 2933717 1 0 0 Ehrlichia 943 genus 1369786 24 0 0 Ehrlichia canis 944 species 1315030 1 0 0 Ehrlichia chaffeensis 945 species 1174554 42 25 0 Wolbachia 953 genus 1159582 6 0 0 Bdellovibrio bacteriovorus 959 species 3592845 22 2 0 Herbaspirillum 963 genus 5363540 7 0 0 Herbaspirillum seropedicae 964 species 5513887 34 2 0 Selenomonas 970 genus 3100147 1 0 0 Bacteroidetes 976 phylum 3743691 3 0 0 Cellulophaga lytica 979 species 3765936 163 4 0 Flavobacterium johnsoniae 986 species 6096872 127 114 3.06E-16 Flavobacterium columnare 996 species 3162432 280 140 0 Capnocytophaga ochracea 1018 species 2612925 1 0 0 Erythrobacter 1041 genus 3052398 3 0 0 Allochromatium vinosum 1049 species 3669074 1 0 0 Rhodobacter 1060 genus 4407391 3 0 0 Rhodobacter sphaeroides 1063 species 4585882 25 1 0 Rhodopseudomonas palustris 1076 species 5408501 7 0 0 Blastochloris viridis 1079 species 11174693 30 8 0 Chlorobium 1091 genus 2634484 6 0 0 Pelodictyon luteolum 1100 species 2364842 4 0 0 Prosthecochloris 1101 genus 2579695 1 0 0 Prosthecochloris aestuarii 1102 species 2579695 2 0 0 Porphyrobacter 1111 genus 0 13 0 0 Porphyrobacter neustonensis 1112 species 3090363 6 3 0 Cyanobacteria 1117 phylum 4335693 2 0 0 Chroococcales 1118 order 4289605 6 0 0 Synechococcus 1129 genus 2719262 10 0 0 Synechococcus elongatus PCC 7942 1140 leaf 2742269 7 4 0 Synechocystis 1142 genus 3570073 3 0 0 Synechocystis sp. PCC 6714 1147 species 3738889 30 27 0 Synechocystis sp. PCC 6803 1148 species 3570073 14 10 0 Oscillatoriales 1150 order 7831139 3 0 0 Nostocaceae 1162 family 7202873 4 0 0 Nostoc 1177 genus 9059191 1 0 0 Rivulariaceae 1185 family 6960392 4 0 0 Prochlorococcus 1218 genus 1879471 1 0 0 Prochlorococcus marinus 1219 species 1879471 3 0 0 Proteobacteria 1224 phylum 4746951 19 0 0 Gammaproteobacteria 1236 class 5425953 23 2 0 Piscirickettsia salmonis 1238 species 3450064 137 51 0 Firmicutes 1239 phylum 3499786 5 0 0 Leuconostoc gelidum 1244 species 1966103 1 0 0 Leuconostoc mesenteroides 1245 species 1966146 4 0 0 Leuconostoc lactis 1246 species 1788069 4 4 0 Pediococcus 1253 genus 1866772 3 0 0 Pediococcus acidilactici 1254 species 2131361 21 20 0 Pediococcus pentosaceus 1255 species 1810762 55 39 0 Micrococcaceae 1268 family 3531727 1 0 0 Micrococcus 1269 genus 2501097 1 0 0 Micrococcus luteus 1270 species 2501097 1 0 0 Dermacoccus nishinomiyaensis 1274 species 3113642 5 4 0 Staphylococcus 1279 genus 3831402 4 0 0 Staphylococcus aureus 1280 species 4189009 512 178 0 Staphylococcus carnosus 1281 species 2566424 89 53 0 Staphylococcus epidermidis 1282 species 2601987 97 12 0 Staphylococcus haemolyticus 1283 species 2697861 55 29 0 Staphylococcus hyicus 1284 species 2472129 25 21 0 Staphylococcus simulans 1286 species 2647552 34 29 0 Staphylococcus xylosus 1288 species 8411206 240 100 0 Staphylococcus schleiferi 1295 species 12494798 318 17 0 Deinococcus 1298 genus 4148054 2 0 0 Streptococcaceae 1300 family 2127385 1 0 0 Streptococcus 1301 genus 2063587 26 21 0 Streptococcus gordonii 1302 species 2196662 79 36 0 Streptococcus salivarius 1304 species 2213879 107 24 0 Streptococcus suis 1307 species 2106595 111 61 0 Streptococcus thermophilus 1308 species 1844731 91 20 0 Streptococcus mutans 1309 species 2024183 24 8 0 Streptococcus agalactiae 1311 species 2078995 79 47 0 Streptococcus pneumoniae 1313 species 2114821 104 23 0 Streptococcus pyogenes 1314 species 1940887 218 23 0 Streptococcus anginosus 1328 species 2089210 60 27 0 Streptococcus intermedius 1338 species 1963517 2 0 0 Streptococcus iniae 1346 species 4185606 72 0 0 Enterococcus 1350 genus 3036872 5 0 0 Enterococcus faecalis 1351 species 2996992 76 45 1.56E-10 Enterococcus faecium 1352 species 2979896 190 50 0 Enterococcus gallinarum 1353 species 3821349 57 39 0 Enterococcus hirae 1354 species 2856440 77 47 0 Lactococcus 1357 genus 2617832 1 0 0 Lactococcus lactis 1358 species 2728319 115 69 0 Lactococcus lactis subsp. lactis 1360 subspecies 5219324 47 12 0 Planococcus 1372 genus 3804624 1 0 0 Planococcus kocurii 1374 species 3485580 41 35 0 Aerococcus 1375 genus 2080974 2 0 0 Aerococcus urinae 1376 species 2080974 24 19 0 Aerococcus viridans 1377 species 2199877 20 8 0 Bacillales 1385 order 4556564 4 0 0 Bacillus 1386 genus 5402033 47 39 0 Bacillus amyloliquefaciens 1390 species 3989737 196 19 0 Bacillus anthracis 1392 species 5935455 205 15 0 Bacillus cereus 1396 species 6217228 770 123 0 Bacillus coagulans 1398 species 3330766 128 14 0 Bacillus licheniformis 1402 species 8445242 55 8 0 Bacillus megaterium 1404 species 5334474 7 0 0 Bacillus mycoides 1405 species 11312355 361 139 0 Paenibacillus polymyxa 1406 species 5942566 189 63 0 Bacillus pumilus 1408 species 3704641 750 361 0 Bacillus sp. 1409 species 4233615 62 0 0 Lysinibacillus sphaericus 1421 species 14371778 250 34 0 Bacillus subtilis 1423 species 5309360 383 14 0 Parageobacillus thermoglucosidans 1426 species 3993793 167 0 0 Bacillus thuringiensis 1428 species 6849293 727 196 0 Bacillus thuringiensis serovar alesti 1440 leaf 5818118 19 8 0 Bacillus thuringiensis serovar morrisoni 1441 leaf 6179896 31 3 0 Bacillus thuringiensis serovar tolworthi 1442 leaf 6870591 54 18 0 Bacillus atrophaeus 1452 species 4168266 48 0 0 Sporosarcina psychrophila 1476 species 4674191 143 142 0 Bacillus simplex 1478 species 5521719 81 75 0 Bacillus smithii 1479 species 3381292 61 48 0 Virgibacillus halodenitrificans 1482 species 3917759 48 38 0 Clostridium 1485 genus 4700784 7 1 0 Clostridium botulinum 1491 species 4204997 418 146 0 Clostridium butyricum 1492 species 13843423 395 2 0 Clostridium cellulovorans 1493 species 5262222 1 0 0 Clostridioides difficile 1496 species 5577074 234 78 0 Clostridium formicaceticum 1497 species 4586755 73 69 0 Clostridium pasteurianum 1501 species 8095941 116 0 0 Clostridium perfringens 1502 species 3171211 358 105 0 Clostridium sporogenes 1509 species 8284974 246 0 0 Acetoanaerobium sticklandii 1511 species 2715461 119 118 0 Clostridium tyrobutyricum 1519 species 3134437 126 118 0 Clostridium beijerinckii 1520 species 5999841 260 138 0 [Clostridium] cellulolyticum 1521 species 4068724 1 0 0 Moorella thermoacetica 1525 species 2628784 33 20 0 Clostridium scatologenes 1548 species 5749410 188 161 0 Clostridium estertheticum subsp. estertheticum 1552 subspecies 4785613 256 242 0 Desulfotomaculum nigrificans 1565 species 2892255 1 0 0 Leifsonia xyli 1575 species 2635288 13 8 0 Lactobacillus 1578 genus 2506241 8 0 0 Lactobacillus acidophilus 1579 species 2027635 36 0 0 Lactobacillus brevis 1580 species 2464052 8 1 0 Lactobacillus casei 1582 species 3039836 31 0 0 Lactobacillus delbrueckii subsp. bulgaricus 1585 subspecies 1875071 15 0 0 Lactobacillus helveticus 1587 species 2095920 119 22 0 Lactobacillus plantarum 1590 species 3281690 89 51 0 Lactobacillus paracasei 1597 species 3007940 69 7 0 Lactobacillus reuteri 1598 species 2118918 43 8 0 Lactobacillus acetotolerans 1600 species 1704859 30 22 0 Lactobacillus fermentum 1613 species 2148561 8 1 0 Lactobacillus salivarius 1624 species 2082826 76 37 0 Listeria 1637 genus 3095536 3 0 0 Listeria ivanovii 1638 species 3701623 1 0 0 Listeria monocytogenes 1639 species 3045735 289 144 0 Renibacterium salmoninarum 1646 species 3155250 2 0 0 Erysipelothrix rhusiopathiae 1648 species 1770425 43 2 0 Trueperella pyogenes 1661 species 2272494 4 1 0 Arthrobacter 1663 genus 0 1 0 0 Bifidobacterium 1678 genus 2353730 9 2 0 Bifidobacterium longum subsp. longum 1679 subspecies 7220280 1 0 0 Bifidobacterium adolescentis 1680 species 2089645 54 2 0 Bifidobacterium bifidum 1681 species 2209060 1 0 0 Bifidobacterium angulatum 1683 species 2021974 15 0 0 Bifidobacterium breve 1685 species 2317134 10 5 0 Bifidobacterium coryneforme 1687 species 1755151 7 0 0 Bifidobacterium dentium 1689 species 2636018 1 0 0 Brevibacterium linens 1703 species 8072179 14 14 0 Corynebacterium stationis 1705 species 2853666 105 103 0 Cellulomonas fimi 1708 species 4266344 2 0 0 Corynebacterium 1716 genus 2717615 3 0 0 Corynebacterium diphtheriae 1717 species 2469401 10 8 0 Corynebacterium glutamicum 1718 species 3768251 46 5 0 Corynebacterium pseudotuberculosis 1719 species 2333432 40 33 0 Eubacterium limosum 1736 species 4316707 72 63 0 Propionibacterium acnes 1747 species 2515790 18 11 2.05E-09 Acidipropionibacterium acidipropionici 1748 species 3656170 33 2 0 Propionibacterium freudenreichii subsp. shermanii 1752 subspecies 2675045 9 0 0 Thermoanaerobacter 1754 genus 2449969 8 8 0 Actinobacteria 1760 class 4559667 25 2 0 Mycobacteriaceae 1762 family 5757622 1 0 0 Mycobacterium 1763 genus 5770040 17 1 0 Mycobacterium avium 1764 species 6256976 19 7 0 Mycobacterium bovis 1765 species 5455659 4 1 0 Mycobacterium fortuitum 1766 species 6254616 7 1 0 Mycobacterium intracellulare 1767 species 5374059 4 0 0 Mycobacterium avium subsp. paratuberculosis 1770 subspecies 14396848 10 0 0 Mycobacterium phlei 1771 species 5349645 4 3 0 Mycobacterium smegmatis 1772 species 20964686 8 7 0 Mycobacterium tuberculosis 1773 species 4956632 3 0 0 Nocardia 1817 genus 7567967 1 0 0 Rhodococcus 1827 genus 7101773 20 1 0 Rhodococcus erythropolis 1833 species 6691155 7 0 0 Saccharopolyspora 1835 genus 8212805 1 0 0 Saccharopolyspora erythraea 1836 species 8212805 16 0 0 Nocardioides 1839 genus 4376707 2 0 0 Pseudonocardia 1847 genus 7303989 1 0 0 Saccharomonospora 1851 genus 4308349 1 0 0 Frankia 1854 genus 7497934 2 0 0 Frankia alni 1859 species 7497934 1 0 0 Streptomyces 1883 genus 9480870 37 8 0 Streptomyces albus 1888 species 6841649 84 4 0 Streptomyces ambofaciens 1889 species 8393598 35 4 0 Streptomyces clavuligerus 1901 species 7590758 33 28 0 Streptomyces glaucescens 1907 species 7623774 33 27 0 Streptomyces lincolnensis 1915 species 10319054 54 46 0 Streptomyces reticuli 1926 species 9336224 88 80 0 Streptosporangium 2000 genus 10369518 1 0 0 Thermobispora bispora 2006 species 4189976 1 0 0 Nocardiopsis 2013 genus 6195761 1 0 0 Nocardiopsis dassonvillei 2014 species 6543312 21 2 0 Curtobacterium 2034 genus 0 3 0 0 Actinomycetales 2037 order 2135042 1 0 0 Tropheryma whipplei 2039 species 926620 1 0 0 Aeromicrobium erythreum 2041 species 3629239 9 9 0 Pimelobacter 2044 genus 0 1 0 0 Pimelobacter simplex 2045 species 5637360 18 15 3.63E-16 Actinomycetaceae 2049 family 2135042 1 0 0 Gordonia 2053 genus 5567155 1 0 0 Gordonia terrae 2055 species 5701501 74 71 0 Tsukamurella 2060 genus 4479724 1 0 0 Tsukamurella paurometabola 2061 species 4479724 2 0 0 Streptomycetaceae 2062 family 9449161 3 0 0 Kitasatospora 2063 genus 8783278 1 0 0 Kitasatospora setae 2066 species 8783278 4 0 0 Pseudonocardiaceae 2070 family 9499602 3 0 0 Mycoplasmataceae 2092 family 976900 3 0 0 Mycoplasma 2093 genus 986123 1 0 0 Mycoplasma arginini 2094 species 678592 32 29 0 Mycoplasma capricolum 2095 species 1523824 16 6 0 Mycoplasma gallisepticum 2096 species 968554 19 14 0 Mycoplasma hominis 2098 species 690305 84 26 0 Mycoplasma hyopneumoniae 2099 species 909234 8 4 0 Mycoplasma hyorhinis 2100 species 836229 67 11 0 Mycoplasma mycoides 2102 species 2100167 30 22 0 Mycoplasma mycoides subsp. mycoides 2103 subspecies 5780102 28 7 0 Mycoplasma pneumoniae 2104 species 866945 9 9 0 Mycoplasma agalactiae 2110 species 877438 21 13 0 Mycoplasma californicum 2113 species 799088 54 31 0 Ureaplasma urealyticum 2130 species 874478 1 0 0 Spiroplasma 2132 genus 1281935 2 0 0 Methanobacteriales 2158 order 1865270 1 0 0 Methanobacteriaceae 2159 family 1989655 3 0 0 Methanobacterium 2160 genus 0 1 0 0 Methanobacterium formicicum 2162 species 7422571 167 77 0 Methanobrevibacter 2172 genus 2395181 1 0 0 Methanohalophilus mahii 2176 species 2012424 1 0 0 Methanothermus 2179 genus 1243342 3 0 0 Methanothermus fervidus 2180 species 1243342 1 0 0 Methanococcus 2184 genus 1742462 1 0 0 Methanotorris igneus 2189 species 1854197 27 0 0 Methanocorpusculum 2192 genus 1804962 1 0 0 Methanomicrobiaceae 2194 family 2703721 1 0 0 Methanospirillum 2202 genus 3544738 1 0 0 Methanosarcina mazei 2209 species 4120463 20 19 0 Haloarcula 2237 genus 4022047 1 0 0 Haloferax 2251 genus 3958803 1 0 0 Natronomonas pharaonis 2257 species 2749696 1 0 0 Thermococcaceae 2259 family 1917634 2 0 0 Thermococcus 2263 genus 2003986 27 27 0 Desulfurococcaceae 2272 family 1398157 1 0 0 Sulfolobus solfataricus 2287 species 2830609 75 30 0 Desulfobacterium autotrophicum 2296 species 5657782 1 0 0 Methanosphaera stadtmanae 2317 species 1767403 1 0 0 Thermoanaerobacter kivui 2325 species 2397824 39 24 0 Thermotoga 2335 genus 2865001 6 2 0 Thermotoga maritima 2336 species 7469591 17 1 0 Candidatus Sodalis pierantonius str. SOPE 2342 leaf 4513140 7 5 0 Haliscomenobacter hydrossis 2350 species 8771651 1 0 0 Xylella fastidiosa 2371 species 2609554 4 4 0 Fervidobacterium islandicum 2423 species 2237377 18 16 0 Heliobacterium 2697 genus 3075407 2 0 0 Marinobacter hydrocarbonoclasticus 2743 species 4384621 6 0 0 Halomonas 2745 genus 4061296 2 0 0 Carnobacterium 2747 genus 3073765 5 0 0 Primates 9443 order 0 9 0 0 Hominidae 9604 family 0 6 0 0 Homo 9605 genus 0 3 0 0 Homo sapiens 9606 species 3238442024 20057004 7068112 2.25E-08 Cowpox virus 10243 species 224499 1 1 0 Raccoonpox virus 10256 species 214699 4 3 0 Orf virus 10258 species 139962 1 1 0 Fowlpox virus 10261 species 288539 8 8 0 Pigeonpox virus 10264 species 282356 4 4 0 Sheeppox virus 10266 species 149955 6 2 0 Rabbit fibroma virus 10271 species 159857 3 3 0 Swinepox virus 10276 species 146454 3 3 0 Choristoneura biennis entomopoxvirus 10288 species 307691 6 1 0 Human herpesvirus 2 10310 species 154675 1 0 0 Cercopithecine herpesvirus 2 10317 species 150715 1 1 0 Bovine herpesvirus 1 10320 species 135301 1 0 0 Human alphaherpesvirus 3 10335 species 124884 4 4 0 Saimiriine herpesvirus 1 10353 species 156742 2 1 0 Human herpesvirus 5 10359 species 235646 26 3 0 Murid herpesvirus 1 10366 species 230278 4 1 0 Equid herpesvirus 5 10371 species 182380 364 83 0 Human herpesvirus 7 10372 species 153080 15 9 0 Saimiriine herpesvirus 2 10381 species 112930 1 1 0 Bovine herpesvirus 4 10385 species 108873 2 2 0 Gallid herpesvirus 1 10386 species 148687 4 2 0 Gallid herpesvirus 2 10390 species 177874 4 3 0 Tupaiid herpesvirus 1 10397 species 195859 1 1 0 Ovine herpesvirus 2 10398 species 135135 2 1 0 Ictalurid herpesvirus 1 10401 species 134226 1 1 0 Lymantria dispar multiple nucleopolyhedrovirus 10449 species 161046 6 6 0 Agrotis segetum granulovirus 10464 species 131680 8 7 0 Campoletis sonorensis ichnovirus 10484 species 240596 2 1 0 African swine fever virus 10497 species 170101 1 1 0 Paramecium bursaria Chlorella virus 1 10506 species 330611 6 6 0 Human adenovirus 2 10515 leaf 35937 2 0 0 Deltapapillomavirus 2 10564 species 8374 2 0 0 Human papillomavirus type 9 10621 leaf 7434 1 1 0 Myoviridae 10662 family 153908 7 2 0 T4virus 10663 genus 167434 12 0 0 Bacillus virus SPO1 10685 species 132562 2 1 0 Siphoviridae 10699 family 47340 4 2 0 Podoviridae 10744 family 65210 1 0 0 Streptococcus phage Cp-1 10747 species 19343 6 6 0 Escherichia phage N4 10752 species 70153 3 1 0 Salmonella virus P22 10754 species 41724 13 0 0 Canine parvovirus 10788 leaf 5323 7 7 0 Minute virus of mice 10794 leaf 5149 28649686 28643101 1 Porcine parvovirus 10796 leaf 5075 2121 1791 0 Spiroplasma phage 1-R8A2B 10854 species 8273 1 0 0 Murray Valley encephalitis virus 11079 species 11014 1 0 0 Bovine viral diarrhea virus 1 11099 species 12573 15 0 0 Murine hepatitis virus strain A59 11142 leaf 31357 1 0 0 Turkey coronavirus 11152 leaf 27657 1 1 0 Phocine distemper virus 11240 species 15696 1 1 0 Bovine respiratory syncytial virus 11246 species 15140 8 7 0 Marburg marburgvirus 11269 species 38225 1 1 0 Influenza C virus (C/Ann Arbor/1/50) 11553 leaf 12555 1 1 0 Uukuniemi virus 11591 species 11372 2 2 0 Dugbe nairovirus 11595 species 18859 1 1 0 Impatiens necrotic spot virus 11612 species 16740 1 1 0 Reticuloendotheliosis virus 11636 species 8295 1 0 0 Bovine immunodeficiency virus 11657 species 8482 1 0 0 Jaagsiekte sheep retrovirus 11746 species 7462 3 3 0 Mouse mammary tumor virus 11757 species 8805 23 21 0 Baboon endogenous virus strain M7 11764 leaf 8507 8 7 0 Feline leukemia virus 11768 species 8448 21 14 0 Abelson murine leukemia virus 11788 species 5894 76 63 0 Friend murine leukemia virus 11795 leaf 8323 21 6 0 Moloney murine leukemia virus 11801 leaf 8332 46 2 0 Moloney murine sarcoma virus 11809 species 5833 92 2 0 Spleen focus-forming virus 11819 species 6296 58 6 0 Murine osteosarcoma virus 11830 species 3811 262 255 0 RD114 retrovirus 11834 species 8406 63 58 0 Gibbon ape leukemia virus 11840 species 8088 36 35 0 Mason-Pfizer monkey virus 11855 species 8557 17 13 0 Avian myelocytomatosis virus 11867 species 3392 2 0 0 Avian carcinoma virus 11958 species 2630 4 2 0 Woolly monkey sarcoma virus 11970 species 5159 1 0 0 Erysimum latent virus 12152 species 6035 1 1 0 Beet yellows virus 12161 species 15480 1 1 0 Grapevine chrome mosaic virus 12273 species 11653 1 1 0 Clostridium phage c-st 12336 species 185683 15 15 0 Enterobacteria phage RB69 12353 leaf 167560 9 9 0 Garlic latent virus 12458 leaf 8363 1 1 0 Human herpesvirus 4 type 2 12509 leaf 172764 4 0 0 Equid herpesvirus 2 12657 species 184439 1 1 0 Raspberry ringspot virus 12809 species 11849 1 1 0 Respiratory syncytial virus 12814 species 15191 5 5 0 Acidovorax 12916 genus 4877171 20 0 0 Dactylococcopsis salina PCC 8305 13035 leaf 3781008 21 21 0 Burkholderia mallei 13373 species 7121566 39 10 1.37E-10 Sphingomonas 13687 genus 5564099 11 3 0 Lysinibacillus fusiformis 28031 species 4843789 108 56 0 Staphylococcus lugdunensis 28035 species 2627127 149 66 0 Streptococcus mitis 28037 species 2146611 265 126 6.56E-10 Lactobacillus curvatus 28038 species 5775917 19 2 0 Acidothermus cellulolyticus 28049 species 2443540 1 0 0 Micromonosporaceae 28056 family 7146176 7 0 0 Nostoc sp. PCC 7524 28072 species 6718869 96 67 0 Neisseria weaveri 28091 species 2188497 4 3 0 Burkholderia gladioli 28095 species 9052299 301 10 7.68E-10 Alteromonas macleodii 28108 species 4602757 39 23 0 Francisella philomiragia 28110 species 2033555 202 64 0 Bacteroides ovatus 28116 species 6475296 78 0 0 Porphyromonas asaccharolytica 28123 species 2186370 1 0 0 Prevotella intermedia 28131 species 2699437 25 11 0 Cronobacter sakazakii 28141 species 4439412 19 4 0 Salmonella enterica subsp. enterica serovar Senftenberg 28150 leaf 4763085 6 5 0 Yersinia kristensenii 28152 species 4496569 48 13 0 Vibrio nigripulchritudo 28173 species 6322155 30 28 0 Arcobacter 28196 genus 2510848 1 0 0 Arcobacter butzleri 28197 species 2283719 3 0 0 Alphaproteobacteria 28211 class 3711906 7 0 0 Betaproteobacteria 28216 class 5455291 1 0 0 Deltaproteobacteria 28221 class 4979291 2 0 0 Colwellia 28228 genus 5373180 1 0 0 Geobacter 28231 genus 4227210 1 0 0 Marinomonas 28253 genus 4292128 1 0 0 Halomonadaceae 28256 family 1615208 6 0 0 Human adenovirus 5 28285 leaf 35938 2 0 0 Hyphantria cunea nucleopolyhedrovirus 28288 species 132959 6 6 0 Cydia pomonella granulovirus 28289 species 123500 1 0 0 Porcine epidemic diarrhea virus 28295 species 28033 4 4 0 Murid herpesvirus 2 28304 species 230138 1 1 0 Amsacta moorei entomopoxvirus 28321 species 232392 35 33 0 Clavibacter michiganensis 28447 species 3317670 17 4 2.14E-10 Burkholderia pseudomallei 28450 species 7728704 156 33 2.29E-10 Leptospira alstonii 28452 species 4591888 22 22 0 Taterapox virus 28871 species 198050 2 1 0 Camelpox virus 28873 species 205719 1 1 0 Volepox virus 28874 species 217124 4 4 0 Caudovirales 28883 order 120871 19 0 0 Euryarchaeota 28890 phylum 2859762 2 0 0 Salmonella enterica 28901 species 6635760 175 121 0 Mycoplasma bovis 28903 species 972935 59 19 0 Bacillus thuringiensis serovar galleriae 29338 leaf 6742233 18 5 0 [Clostridium] cellulosi 29343 species 2229578 16 14 0 Staphylococcus saprophyticus 29385 species 2577899 88 4 0 Microlunatus phosphovorus 29405 species 5683123 3 0 0 Rhodoplanes 29407 genus 0 1 0 0 Synechococcus sp. WH 8103 29410 species 2429688 31 4 0 Moraxella ovis 29433 species 2306095 52 50 0 Rhizobium etli 29449 species 6846222 3 0 0 Brucella melitensis 29459 species 3855017 1 1 0 Brucella suis 29461 species 6085890 3 0 0 Pectobacterium atrosepticum 29471 species 5064019 75 6 0 Yersinia rohdei 29485 species 4372253 17 17 0 Yersinia ruckeri 29486 species 7304941 35 17 0 Photorhabdus 29487 genus 5418042 1 0 0 Mycoplasma haemofelis 29501 species 1151598 1 0 0 Borreliella afzelii 29518 species 1151622 19 1 0 Borreliella garinii 29519 species 933029 5 0 0 Pelobacter propionicus 29543 species 4241119 1 0 0 Epsilonproteobacteria 29547 class 1945322 1 0 0 Rhodothermus marinus 29549 species 3360429 1 0 0 Mycoplasma canadense 29554 species 693241 75 50 0 Mycoplasma canis 29555 species 897443 57 4 0 Janthinobacterium 29580 genus 5949001 6 0 0 Anticarsia gemmatalis nucleopolyhedrovirus 31507 species 132239 1 1 0 Agrotis segetum nucleopolyhedrovirus 31508 species 147544 2 2 0 Lactococcus phage SK1 31532 species 28451 1 0 0 Lactococcus phage c2 31537 species 22172 1 1 0 Bifidobacteriaceae 31953 family 2290088 1 0 0 Propionibacteriaceae 31957 family 2829393 2 0 0 Amycolatopsis orientalis 31958 species 8982090 222 10 0 Clavibacter michiganensis subsp. sepedonicus 31964 subspecies 3403786 7 4 1.24E-16 Mollicutes 31969 class 1008559 1 0 0 Clostridiaceae 31979 family 4521174 1 0 0 Rhodobacteraceae 31989 family 4417673 2 0 0 Methylobacterium radiotolerans 31998 species 6899110 8 0 0 Achromobacter denitrificans 32002 species 6226215 14 8 0 Burkholderia 32008 genus 7695944 692 359 0 Methylophilaceae 32011 family 2915241 11 0 0 Thiomonas 32012 genus 3462095 3 0 0 Campylobacter fetus subsp. venerealis 32020 subspecies 1930368 10 3 0 Campylobacter jejuni subsp. jejuni 32022 subspecies 23934722 71 22 0 Synechococcus elongatus 32046 species 2719262 1 0 0 Synechococcus sp. PCC 7002 32049 species 3409935 22 10 0 Synechococcus sp. WH 7803 32051 species 2366980 12 4 0 Calothrix parietina 32054 species 6960392 1 0 0 Human herpesvirus 6B 32604 species 162114 1 1 0 synthetic construct 32630 species 26537524 2451202 83905 1.04E-08 Cutibacterium avidum 33010 species 2526138 6 2 0 Clavibacter michiganensis subsp. insidiosus 33014 subspecies 3408062 9 5 1.20E-16 Parvimonas micra 33033 species 1627009 69 67 0 Sphingopyxis macrogoltabida 33050 species 16800329 93 4 0 Gloeobacter 33071 genus 4691905 1 0 0 Metazoa 33208 kingdom 0 3 0 0 Caviid herpesvirus 2 33706 species 233501 2 0 0 Hepatitis C virus genotype 5 33746 leaf 9343 1 0 0 Microbacterium 33882 genus 3982034 20 9 0 Rathayibacter 33886 genus 0 1 0 0 Rathayibacter tritici 33888 species 3354681 9 3 0 Amycolatopsis mediterranei 33910 species 13655759 197 0 0 Geobacillus thermoleovorans 33941 species 3596620 5 3 0 Lactobacillus johnsonii 33959 species 1907846 25 7 0 Leuconostoc mesenteroides subsp. dextranicum 33966 subspecies 1854727 15 0 0 Leuconostoc mesenteroides subsp. mesenteroides 33967 subspecies 1986568 39 21 0 Melissococcus plutonius 33970 species 2059558 4 0 0 Kineococcus 33981 genus 4956672 1 0 0 Exiguobacterium 33986 genus 2928324 1 0 0 Rickettsia amblyommatis 33989 species 1480884 7 0 0 Rickettsia bellii 33990 species 1525528 9 0 0 Rickettsia rhipicephali 33992 species 1305467 1356 4 0 Candidatus Liberibacter asiaticus 34021 species 1228806 19 0 0 Moraxella osloensis 34062 species 2649137 99 93 5.31E-10 Variovorax 34072 genus 6817856 11 0 0 Variovorax paradoxus 34073 species 6817856 6 0 0 Riemerella anatipestifer 34085 species 2563329 136 19 1.48E-18 Pelodictyon phaeoclathratiforme 34090 species 3018238 3 0 0 Blattabacterium 34098 genus 625324 2 1 0 Lactococcus phage Tuc2009 35241 species 38347 1 0 0 Bovine herpesvirus 5 35244 species 137821 2 1 0 Alcelaphine herpesvirus 1 35252 species 130608 2 1 0 Cryptophlebia leucotreta granulovirus 35254 species 110907 3 3 0 Simbu virus 35306 species 12172 2 0 0 Acholeplasma oculi 35623 species 1587120 37 34 0 Citrobacter amalonaticus 35703 species 5875351 16 8 0 Haloferax gibbonsii 35746 species 3918454 1 1 0 Corynebacterium kutscheri 35755 species 2354065 34 22 0 Rickettsia slovaca 35794 species 1275404 1 0 0 Ehrlichia muris 35795 species 1196717 1 0 0 Nitrosospira 35798 genus 3222211 1 0 0 Rhodovulum sulfidophilum 35806 species 4347929 29 8 0 Bordetella holmesii 35814 species 3698615 5 0 0 Pseudaletia unipuncta granulovirus 36355 species 176677 4 4 0 Lymphocystis disease virus 1 36363 species 102653 7 7 0 Mycobacterium abscessus 36809 species 7033472 20 6 0 Brucella canis 36855 species 3295140 3 0 0 Thiobacillus denitrificans 36861 species 2909809 1 0 0 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 36870 leaf 703004 24 24 0 Paraburkholderia xenovorans 36873 species 19434089 99 0 0 Potato mop-top virus 37128 species 12141 1 1 0 Nocardia brasiliensis 37326 species 9436348 1 0 0 Nocardia farcinica 37329 species 6292344 8 5 0 Nocardia nova 37330 species 8348532 1 0 0 Nocardia seriolae 37332 species 8304518 10 7 0 Marichromatium purpuratum 37487 species 3779112 1 0 0 Candidatus Phytoplasma mali 37692 species 601943 23 22 0 Escherichia coli B 37762 leaf 9048143 1 0 0 Rhodococcus opacus 37919 species 9001985 8 3 0 Sinomonas atrocyanea 37927 species 4492204 11 11 0 Streptomyces pristinaespiralis 38300 species 8532592 22 21 0 Bartonella henselae 38323 species 1931047 55 1 0 Blastococcus 38501 genus 4875340 1 0 0 Ureaplasma parvum serovar 3 38504 leaf 727289 25 20 0 Yaba monkey tumor virus 38804 species 134721 2 2 0 Methanococcus maripaludis 39152 species 1742753 1 0 0 Cotesia congregata bracovirus 39640 species 567670 6 6 0 Sorangium 39643 genus 13907952 1 0 0 Mesorhizobium ciceri 39645 species 6785241 6 2 0 Blattabacteriaceae 39782 family 625324 2 0 0 Dialister pneumosintes 39950 species 1274073 10 8 0 Erythrobacter litoralis 39960 species 3052398 18 12 0 Tyuleniy virus 40004 species 10673 1 1 0 Streptococcus equi subsp. zooepidemicus 40041 subspecies 2149868 42 2 0 Oligotropha carboxidovorans 40137 species 5740737 5 0 0 Aliivibrio salmonicida 40269 species 4655660 2 0 0 Hepatitis C virus genotype 2 40271 leaf 9711 1 0 0 Stenotrophomonas 40323 genus 4684682 2 0 0 Stenotrophomonas maltophilia 40324 species 4684682 62 35 0 Mycoplasma mycoides subsp. capri 40477 subspecies 1085764 29 0 0 Mycoplasma capricolum subsp. capripneumoniae 40480 subspecies 3051236 51 0 0 Listeria phage A500 40522 species 38867 3 0 0 Human papillomavirus type 50 40539 leaf 7184 1 1 0 Xenorhabdus bovienii 40576 species 4225498 84 44 0 Mammalia 40674 class 0 4 0 0 Thioploca ingrica 40754 species 4810005 44 41 0 Borrelia duttonii 40834 species 1574881 1 0 0 Brevundimonas 41275 genus 3445263 4 0 0 Bradyrhizobiaceae 41294 family 6674145 3 0 0 Rhodospirillaceae 41295 family 4587671 2 0 0 Sphingomonadaceae 41297 family 3732557 14 0 0 Cyanothece sp. PCC 8801 41431 species 4787694 65 16 0 "Salmonella enterica subsp. arizonae serovar 62:z4,z23:-" 41514 leaf 4600800 15 1 0 Burkholderia plantarii 41899 species 8081051 400 3 1.27E-08 Hepatitis C virus genotype 6 42182 leaf 9628 1 0 0 Streptomyces sampsonii 42239 species 7070328 19 11 0 Nitrospira moscoviensis 42253 species 4589485 4 2 0 Rubrobacter radiotolerans 42256 species 3267233 13 7 0 Corynebacterium argentoratense 42817 species 2031902 1 0 0 Sulfolobus islandicus 43080 species 2647110 73 58 0 Pseudomonas alcaligenes 43263 species 4406305 664 14 0 Pseudomonas denitrificans 43306 species 5696307 1 0 0 Kutzneria albida 43357 species 9874926 15 0 0 Pseudoalteromonas luteoviolacea 43657 species 18666577 174 11 0 Pseudoalteromonas rubra 43658 species 5913780 58 54 0 Rothia mucilaginosa 43675 species 2264603 17 5 0 Metallosphaera sedula 43687 species 2191517 33 32 0 Corynebacterium urealyticum 43771 species 2342642 1 0 0 Cyanothece 43988 genus 0 3 0 0 Cyanothece sp. ATCC 51142 43989 species 5460377 50 44 0 Caldicellulosiruptor 44000 genus 2744362 4 4 0 Ferrimonas balearica 44012 species 4279159 2 0 0 Polynucleobacter 44013 genus 1859979 5 0 0 Canarypox virus 44088 species 359853 6 6 0 Paenibacillus 44249 genus 6526148 5 2 0 Paenibacillus durus 44251 species 5575484 458 27 0 Bradyrhizobium oligotrophicum 44255 species 8264165 1 0 0 Borrelia recurrentis 44449 species 1242163 1 0 0 Mycobacterium avium subsp. avium 44454 subspecies 5011264 5 1 0 Murine type C retrovirus 44561 leaf 8135 201 138 0 Nitrosomonas communis 44574 species 4067838 85 77 0 Nitrosomonas ureae 44577 species 3307820 37 22 0 Desulfovibrio fairfieldensis 44742 species 3699310 20 18 0 Natronobacterium gregoryi 44930 species 3788356 4 0 0 Capnocytophaga haemolytica 45243 species 2688484 42 40 0 Hyphomicrobiaceae 45401 family 3812969 1 0 0 Psychrobacter urativorans 45610 species 2931580 8 8 0 Vibrio scophthalmi 45658 species 9728927 85 51 0 Autographa californica nucleopolyhedrovirus 46015 leaf 133894 6 0 0 Staphylococcus aureus subsp. aureus 46170 subspecies 43716283 256 7 0 Anabaena sp. 90 46234 species 5305675 80 53 0 Spodoptera litura nucleopolyhedrovirus 46242 species 139342 4 3 0 Weissella 46255 genus 1441470 4 0 0 Sphingobium chlorophenolicum 46429 species 4573221 1 0 0 Hydrogenophaga 47420 genus 0 2 0 0 Borrelia miyamotoi 47466 species 937966 33 0 0 Lactobacillus rhamnosus 47715 species 3576576 20 14 0 Streptomyces lydicus 47763 species 9300149 20 11 0 Pseudomonas azotoformans 47878 species 6859618 10 7 0 Pseudomonas corrugata 47879 species 6124363 39 7 1.35E-14 Pseudomonas oryzihabitans 47885 species 4834356 32 7 2.56E-19 Serratia fonticola 47917 species 12326310 906 23 0 Grapevine leafroll-associated virus 1 47985 species 18659 1 1 0 Acinetobacter pittii 48296 species 3862530 122 38 0 Xanthomonas fragariae 48664 species 8565300 44 0 0 Ralstonia 48736 genus 5963816 3 0 0 Novosphingobium aromaticivorans 48935 species 4233314 4 0 0 Desulfitobacterium hafniense 49338 species 5503334 5 0 0 Flavobacteriaceae 49546 family 3400812 4 1 0 Aotine herpesvirus 1 50290 species 219474 1 1 0 Cercopithecine herpesvirus 5 50292 species 452289 14 13 0 Chlamydiales 51291 order 1167399 2 0 0 Helicoverpa armigera nucleopolyhedrovirus 51313 species 130759 1 1 0 Cucurbit yellow stunting disorder virus 51330 species 17099 2 2 0 Pediococcus damnosus 51663 species 11570178 91 15 0 Aerococcus urinaeequi 51665 species 4067667 70 38 0 Tetragenococcus halophilus 51669 species 2562720 54 7 0 Xestia c-nigrum granulovirus 51677 species 178733 2 1 0 Lactobacillus gallinarum 52242 species 2374782 55 18 0 Actinomyces meyeri 52773 species 2049088 1 1 0 Polaromonas 52972 genus 5366143 1 0 0 Feline foamy virus 53182 species 10479 1 0 0 Pseudoalteromonas 53246 genus 4394956 10 0 0 Pantoea 53335 genus 4848853 1 0 0 Enterococcus durans 53345 species 6143683 69 3 0 Intrasporangium calvum 53358 species 4024382 1 0 0 Pseudomonas citronellolis 53408 species 14631203 54 19 0 Halobacteroidaceae 53434 family 2559425 23 0 0 Lactobacillus lindneri 53444 species 2842174 66 0 0 Thermococcus peptonophilus 53952 species 1896106 20 7 0 Thermococcus chitonophagus 54262 species 1969648 18 11 0 Raoultella ornithinolytica 54291 species 5398151 46 15 0 Salmonella enterica subsp. enterica serovar Paratyphi A 54388 leaf 9211391 2 0 0 Streptomyces venezuelae 54571 species 18089227 54 23 0 Salmonella bongori 54736 species 4542714 1 0 0 Mobala mammarenavirus 55097 species 10705 1 1 0 Deinococcus proteolyticus 55148 species 2886836 2 0 0 Pectobacterium wasabiae 55208 species 5043228 1 0 0 Janthinobacterium agaricidamnosum 55508 species 5949001 2 0 0 Staphylococcus phage Twort 55510 species 130706 1 1 0 Vibrio anguillarum 55601 species 4084966 53 26 0 Thermococcus barophilus 55802 species 2064237 29 12 0 Oscillatoria acuminata PCC 6304 56110 leaf 7804270 45 44 0 Xanthomonas sacchari 56458 species 5006106 5 4 0 Syntrophus aciditrophicus SB 56780 leaf 3179300 18 18 0 Thermus brockianus 56956 species 2388273 12 11 0 Bacillus phage Bastille 57477 species 153962 1 0 0 Kocuria 57493 genus 2697540 2 0 0 Halomicrobium mukohataei 57705 species 3332349 1 0 0 Salmonella enterica subsp. enterica serovar Weltevreden 57743 leaf 20446954 21 2 0 Burkholderia thailandensis 57975 species 6739614 110 5 0 Colwellia sp. MT41 58049 species 4337945 71 42 0 Desulfotomaculum kuznetsovii 58135 species 3601386 1 0 0 Desulfotomaculum acetoxidans 58138 species 4545624 1 0 0 Salmonella enterica subsp. enterica serovar Anatum 58712 leaf 9941516 2 0 0 Salmonella enterica subsp. enterica 59201 subspecies 5190370 1 1 0 Salmonella enterica subsp. diarizonae 59204 subspecies 14518198 4904 0 0 Fibrobacter succinogenes subsp. succinogenes S85 59374 leaf 7685639 136 0 0 Ectropis obliqua nucleopolyhedrovirus 59376 species 131204 2 1 0 Actinotignum schaalii 59505 species 2159306 6 6 0 Chryseobacterium 59732 genus 0 1 0 0 Persicobacter 59740 genus 0 1 0 0 Candidatus Phytoplasma australiense 59748 species 959779 34 6 0 Alcanivorax 59753 genus 4072264 1 0 0 Faba bean necrotic yellows virus 59817 species 7993 1 1 0 Paenibacillus peoriae 59893 species 6219815 87 12 0 Prochlorococcus marinus subsp. pastoris str. CCMP1986 59919 leaf 1657990 38 27 0 Prochlorococcus marinus str. NATL2A 59920 leaf 1842899 77 39 0 Prochlorococcus marinus str. MIT 9303 59922 leaf 2682675 14 9 0 Cyanobium gracile 59930 species 3342364 3 0 0 Shewanella sp. MR-4 60480 species 4706287 19 6 0 Shewanella sp. MR-7 60481 species 4799109 37 25 0 Lactobacillus paraplantarum 60520 species 3139729 14 12 0 Burkholderia pyrrocinia 60550 species 7961346 11 4 2.13E-15 Burkholderia vietnamiensis 60552 species 7660783 31 11 4.73E-10 Phaeobacter gallaeciensis 60890 species 4540155 9 9 0 Shewanella woodyi 60961 species 5935403 2 0 0 Dehalococcoides mccartyi 61435 species 1412881 12 5 0 Paenibacillus mucilaginosus 61624 species 8740689 1 0 0 Acholeplasma brassicae 61635 species 1877792 33 30 0 Enterobacter asburiae 61645 species 4787018 35 12 0 Lelliottia amnigena 61646 species 4616371 48 38 0 Pluralibacter gergoviae 61647 species 5489680 30 19 0 Kluyvera intermedia 61648 species 6166452 118 51 0 Serratia rubidaea 61652 species 4922834 8 6 0 Anomala cuprea entomopoxvirus 62099 species 245717 11 9 0 Shewanella baltica 62322 species 5379488 3 1 0 Azoarcus sp. BH72 62928 species 4376040 6 2 0 Acinetobacter sp. ADP1 62977 species 3598621 37 36 0 Zobellia galactanivorans 63186 species 5521712 36 30 0 South African cassava mosaic virus 63723 species 5560 1 1 0 Nostoc punctiforme PCC 73102 63737 leaf 9059191 198 175 0 Natronomonas 63743 genus 2831134 1 0 0 Sideroxydans lithotrophicus 63745 species 3003656 6 0 0 Halobacterium salinarum NRC-1 64091 leaf 2571010 1 0 0 Xanthomonas oryzae pv. oryzae 64187 leaf 49453627 29 11 0 Apoi virus 64280 species 10116 2 2 0 Synechococcus sp. CC9311 64471 species 2606748 18 17 0 Borreliella 64895 genus 1162446 3 1 0 Aquificaceae 64898 family 2192478 2 0 0 Mitsuaria 65047 genus 0 3 0 0 Corynebacterium ulcerans 65058 species 2534616 28 1 0 Halothece sp. PCC 7418 65093 species 4179170 49 49 0 Cyanothece sp. PCC 7424 65393 species 6554169 92 67 0 Wolbachia sp. wRi 66084 species 1445873 188 32 0 Shigella phage SfII 66284 species 41475 1 0 0 Bacillus clausii KSM-K16 66692 leaf 4303871 42 29 0 Propionibacterium freudenreichii subsp. freudenreichii 66712 subspecies 2649166 7 0 0 Bacillus virus SPbeta 66797 species 134416 1 0 0 Hamiltonella virus APSE1 67571 species 36524 1 0 0 Streptomyces griseochromogenes 68214 species 10764674 25 22 0 Streptomyces pactum 68249 species 8180260 24 14 0 Mesorhizobium 68287 genus 7011064 2 0 0 Thermoanaerobacterales 68295 order 2672919 1 0 0 Wiseana iridescent virus 68347 leaf 205791 2 0 0 Streptomyces albulus 68570 species 9784577 25 6 0 Cupriavidus basilensis 68895 species 8421483 87 34 1.88E-10 Thermococcus kodakarensis KOD1 69014 leaf 2088737 23 15 0 Phyllobacteriaceae 69277 family 7011064 2 0 0 Pseudomonas sp. VLB120 69328 species 5966222 5 2 0 Caulobacter henricii 69395 species 3957288 9 4 0 Desulfuromonadales 69541 order 4166387 5 0 0 Ovine enzootic nasal tumor virus 69576 species 7434 12 12 0 Vibrio phage fs1 70203 species 6340 2 2 0 Staphylococcus condimenti 70255 species 2659676 41 30 0 Epiphyas postvittana nucleopolyhedrovirus 70600 species 118584 9 9 0 Pyrococcus horikoshii OT3 70601 leaf 1738505 145 116 0 Vibrio phage K139 70734 species 33106 2 0 0 Pseudomonas plecoglossicida 70775 species 6233254 48 20 0 Haemophilus influenzae Rd KW20 71421 leaf 1830138 5 0 0 Kocuria palustris 71999 species 2854447 6 3 0 Citromicrobium 72173 genus 0 2 0 0 Thiotrichales 72273 order 2696997 1 0 0 Pseudomonadales 72274 order 5593102 1 0 0 Helicobacteraceae 72293 family 1750678 2 0 0 Klebsiella pneumoniae subsp. pneumoniae 72407 subspecies 76960750 35 11 0 Streptococcus phage Sfi19 72638 species 37370 1 0 0 Staphylococcus capitis subsp. capitis 72758 subspecies 2503265 50 47 0 Photobacterium profundum 74109 species 6403280 2 0 0 Brevundimonas subvibrioides 74313 species 3445263 1 0 0 Maricaulis 74317 genus 3368780 1 0 0 Maricaulis maris 74318 species 3368780 1 0 0 Buzura suppressaria nucleopolyhedrovirus 74320 species 120420 3 3 0 Prochlorococcus marinus str. MIT 9312 74546 leaf 1709204 52 37 0 Prochlorococcus marinus str. MIT 9313 74547 leaf 2410873 21 12 0 Choristoneura fumiferana DEF multiple nucleopolyhedrovirus 74660 species 131160 1 1 0 Frankiaceae 74712 family 7497934 1 0 0 Pseudomonas balearica 74829 species 4383480 1 0 0 Paraburkholderia caribensis 75105 species 9482704 47 26 1.00E-10 Thiomonas intermedia K12 75379 leaf 3462095 11 7 0 Oxalobacteraceae 75682 family 5445304 6 0 0 Rhodocyclaceae 75787 family 4209496 3 0 0 Thermocrinis ruber 75906 species 1521037 15 15 0 Mannheimia haemolytica 75985 species 2625450 59 22 0 Aromatoleum aromaticum EbN1 76114 leaf 4727255 5 5 0 Prevotella enoeca 76123 species 2861432 88 81 0 Roseateles depolymerans 76731 species 5681722 28 21 0 Pseudomonas monteilii 76759 species 5972603 20 10 1.58E-15 Myroides odoratimimus 76832 species 4457748 82 11 0 Solibacillus silvestris 76853 species 3984229 205 38 0 Fusobacterium nucleatum subsp. polymorphum 76857 subspecies 5077430 277 156 0 Fusobacterium nucleatum subsp. animalis 76859 subspecies 4860157 157 41 0 Streptococcus constellatus 76860 species 1954077 19 0 0 Pseudomonas putida GB-1 76869 leaf 6078430 23 20 0 Helicobacter typhlonius 76936 species 1920832 30 21 0 Wolbachia endosymbiont of Drosophila simulans 77038 species 1298813 1 0 0 Mamestra brassicae multiple nucleopolyhedrovirus 78219 species 152710 2 0 0 Xanthobacter autotrophicus Py2 78245 leaf 5625098 8 8 0 Asticcacaulis excentricus 78587 species 4308776 2 0 0 Chitinophaga 79328 genus 9127347 2 0 0 Denitrobacterium detoxificans 79604 species 2446250 2 2 0 Bacillus clausii 79880 species 4303871 57 35 0 Bacillus gibsonii 79881 species 4100094 42 1 0 Methanothermobacter marburgensis str. Marburg 79929 leaf 1639135 15 12 0 Equid herpesvirus 3 80341 species 151601 1 1 0 Burkholderiales 80840 order 6491917 34 4 0 Herbaspirillum rubrisubalbicans 80842 species 5611261 3 0 0 Aliivibrio wodanis 80852 species 4635126 34 33 0 Moritella viscosa 80854 species 5093989 55 51 0 Comamonadaceae 80864 family 5402391 29 10 0 Delftia 80865 genus 6767514 13 0 0 Delftia acidovorans 80866 species 6767514 3 0 0 Hyphomonas neptunium 81032 species 3705021 1 0 0 Methylovorus 81682 genus 3082007 3 0 0 Enterococcaceae 81852 family 2894002 3 0 0 Rhizobiaceae 82115 family 5682728 1 0 0 Cupriavidus gilardii 82541 species 5578743 1 0 0 Pseudanabaena sp. PCC 7367 82654 species 4885680 34 34 0 Omikronpapillomavirus 1 82676 species 7879 2 2 0 Obesumbacterium proteus 82983 species 5011796 22 7 0 Pragia fontium 82985 species 4094629 19 19 0 Serratia plymuthica 82996 species 5447150 41 14 0 Melanoplus sanguinipes entomopoxvirus 83191 species 236120 4 4 0 Mycobacterium immunogenum 83262 species 11178626 34 0 0 Aminobacter aminovorans 83263 species 6890726 16 14 6.77E-11 gamma proteobacterium HdN1 83406 species 4587455 15 15 0 Chinese wheat mosaic virus 83544 species 10716 2 2 0 Parachlamydia acanthamoebae 83552 species 3072383 12 0 0 Chlamydia psittaci 83554 species 1253830 10 5 0 Chlamydia abortus 83555 species 1144377 49 0 0 Chlamydia pneumoniae 83558 species 1232820 13 12 0 Chlamydia muridarum 83560 species 1074826 40 31 0 Stenotrophomonas nitritireducens 83617 species 4541729 12 5 0 Leclercia adecarboxylata 83655 species 4803917 23 9 0 Kineosporiaceae 83778 family 4956672 1 0 0 Clostridium aceticum 84022 species 4207037 81 78 0 Clostridium autoethanogenum 84023 species 8704651 3 0 0 Microbacterium chocolatum 84292 species 3168630 20 7 0 Hippea 84404 genus 1694430 1 0 0 Lysobacter antibioticus 84531 species 11681564 19 13 0 Pedobacter 84567 genus 5167383 2 0 0 Synechococcus sp. WH 8102 84588 species 2434428 28 1 0 Aeromonadaceae 84642 family 4772784 1 0 0 Beutenbergia 84756 genus 4669183 1 0 0 Rubrobacteria 84995 class 3225748 3 0 0 Coriobacteriia 84998 class 2427001 1 0 0 Micrococcales 85006 order 3371359 4 0 0 Corynebacteriales 85007 order 4604415 14 0 0 Propionibacteriales 85009 order 3144263 1 0 0 Streptomycetales 85011 order 9449161 4 0 0 Frankiales 85013 order 7497934 1 0 0 Nocardioidaceae 85015 family 5978097 1 0 0 Microbacteriaceae 85023 family 3217613 8 3 0 Geodermatophilaceae 85030 family 5098918 1 0 0 Nakamurellaceae 85031 family 6060298 2 0 0 Acidothermaceae 85032 family 2443540 1 0 0 Bosea 85413 genus 0 1 0 0 Thauera sp. MZ1T 85643 species 4574586 5 5 0 Achromobacter xylosoxidans 85698 species 6745103 39 14 0 Bartonella tribocorum 85701 species 2642404 38 0 0 Helicobacter pylori J99 85963 leaf 3342197 46 18 0 Chlamydia pecorum 85991 species 1105923 1 0 0 Bacillus subtilis subsp. natto 86029 subspecies 4193748 12 1 0 endosymbiont of Acanthamoeba sp. UWC8 86106 species 1615277 16 16 0 Pseudomonas chlororaphis subsp. aurantiaca 86192 subspecies 6702062 30 6 0 Clostridium pasteurianum BC1 86416 leaf 5044100 194 182 0 Methanoculleus sp. MAB1 86622 species 2859299 6 3 0 Mycoplasma dispar 86660 species 1084449 48 46 0 Bacillus weihenstephanensis 86662 species 5872743 175 25 0 Aerococcus christensenii 87541 species 1634920 21 18 0 Burkholderia multivorans 87883 species 10170089 227 5 4.02E-15 Modestobacter 88138 genus 0 1 0 0 Caulobacter segnis 88688 species 4655622 1 0 0 Melon yellow spot virus 89471 species 16965 1 1 0 Hymenobacter 89966 genus 5252070 1 1 0 Salmonella enterica subsp. enterica serovar Typhi 90370 leaf 9592546 1 0 0 Salmonella enterica subsp. enterica serovar Typhimurium 90371 leaf 64608362 44 2 0 Gallionellaceae 90627 family 3083063 4 0 0 Staphylococcaceae 90964 family 3804085 1 0 0 Bacilli 91061 class 3448844 7 0 0 Enterobacterales 91347 order 6031912 5 0 0 Campylobacter hyointestinalis subsp. lawsonii 91353 subspecies 1753277 42 28 0 Candidatus Paracaedibacter acanthamoebae 91604 species 2485110 27 26 0 Candidatus Portiera aleyrodidarum 91844 species 591920 23 0 0 Legionella pneumophila subsp. pascullei 91890 subspecies 10220641 112 10 0 Legionella pneumophila subsp. pneumophila 91891 subspecies 31068438 182 16 0 Thioalkalimicrobium aerophilum 92245 species 2158359 1 0 0 Oryctes rhinoceros nudivirus 92521 species 127615 3 3 0 [Brevibacterium] flavum 92706 species 3340941 15 0 0 Parachlamydiaceae 92713 family 3072383 1 0 0 Ketogulonicigenium vulgare 92945 species 3282752 10 0 0 Prochlorococcus marinus str. MIT 9215 93060 leaf 1738790 39 36 0 Staphylococcus aureus subsp. aureus COL 93062 leaf 2813862 1 0 0 Pandoraea 93217 genus 5429298 15 0 0 Pandoraea apista 93218 species 16769721 23 6 0 Pandoraea norimbergensis 93219 species 6167370 36 19 0 Pandoraea pnomenusa 93220 species 5429298 30 2 0 Edwardsiella hoshinae 93378 species 3811650 20 20 0 Fervidobacterium pennivorans 93466 species 2166381 40 33 0 Roseateles 93681 genus 0 4 0 0 Shewanella sp. ANA-3 94122 species 5251146 14 9 0 Ramlibacter tataouinensis 94132 species 4070193 60 29 4.50E-18 Bordetella petrii 94624 species 5287950 6 6 0 Burkholderia stabilis 95485 species 8527947 59 50 0 Burkholderia cenocepacia 95486 species 7744804 133 11 2.44E-10 Bacillus subtilis subsp. spizizenii 96241 subspecies 4027672 36 0 0 Flavobacterium psychrophilum 96345 species 2803807 574 44 0 Desulfococcus oleovorans Hxd3 96561 leaf 3944167 15 13 0 Bacillus sp. OxB-1 98228 species 3594618 57 55 0 Bacteroides phage B40-8 99179 species 44929 2 2 0 Calothrix sp. PCC 7507 99598 species 7023215 106 90 0 Streptomyces coelicolor A3(2) 100226 leaf 9054847 29 21 0 Chloroherpeton thalassium 100716 species 3293456 1 0 0 Northern cereal mosaic virus 100880 species 13222 4 4 0 Wolbachia endosymbiont of Onchocerca ochengi 100901 species 957990 15 0 0 Methanomethylovorans 101191 genus 2714013 1 0 0 Rhodococcus jostii RHA1 101510 leaf 9702737 9 5 0 Burkholderia ubonensis 101571 species 7189071 287 23 2.14E-09 Helicobacter pylori F32 102608 leaf 1581461 6 0 0 Helicobacter pylori J166 102611 leaf 1650561 22 3 0 Streptococcus infantarius 102684 species 2008249 26 5 0 Nostoc sp. PCC 7120 103690 species 7211789 98 87 0 Bordetella hinzii 103855 species 9772861 13 0 0 Potato yellow vein virus 103881 species 17266 2 2 0 Pseudomonas frederiksbergensis 104087 species 6118567 5 4 0 Ralstonia mannitolilytica 105219 species 9915295 37 6 3.65E-15 Nitrosococcus watsonii C-113 105559 leaf 3373286 28 26 0 Methylibium petroleiphilum 105560 species 4643639 1 0 0 Callitrichine herpesvirus 3 106331 species 149696 1 1 0 Porcine enteric sapovirus 106333 leaf 7320 1 1 0 Frankia casuarinae 106370 species 5433628 9 8 0 Cupriavidus 106589 genus 7128984 8 0 0 Cupriavidus necator 106590 species 7948767 9 0 0 Ensifer adhaerens 106592 species 7267502 4 4 0 Thioalkalivibrio versutus 106634 species 2969361 6 5 0 Acinetobacter nosocomialis 106654 species 4061750 59 28 2.73E-12 Buchnera aphidicola str. APS (Acyrthosiphon pisum) 107806 leaf 655725 3 0 0 Rickettsia monacensis 109232 species 1353450 13 8 0 Halothiobacillus 109262 genus 2582886 1 0 0 Equine foamy virus 109270 species 12035 2 2 0 Synechococcus sp. CC9605 110662 species 2510659 19 16 0 Actinomyces radicidentis 111015 species 3051613 12 10 0 Bovine adenovirus 6 111167 leaf 30024 2 2 0 Stanieria cyanosphaera PCC 7437 111780 leaf 5544990 85 83 0 Leptolyngbya sp. PCC 7376 111781 species 5125950 48 42 0 Sulfolobus tokodaii 111955 species 2694756 6 0 0 Streptococcus phage 7201 112023 species 35466 1 0 0 Geoglobus ahangari 113653 species 1770093 3 2 0 Desulfurococcales 114380 order 1469569 1 0 0 Lactococcus phage ul36 114416 species 36798 7 0 0 Bradyrhizobium sp. ORS 278 114615 species 7456587 14 10 0 Aeromonas virus 44RR2 115987 species 173591 1 0 0 Vibrio phage nt-1 115992 species 247511 7 1 0 Rhynchosia golden mosaic virus 117198 species 5155 2 2 0 Flavobacteriia 117743 class 3047933 6 0 0 Pleurocapsa sp. PCC 7327 118163 leaf 4986817 36 31 0 Oscillatoria acuminata 118323 species 7804270 1 0 0 Sulfolobaceae 118883 family 2475668 1 0 0 Deinococcales 118964 order 4037097 1 0 0 Rhodobiaceae 119043 family 3914745 1 0 0 Filomicrobium 119044 genus 0 1 0 0 Burkholderiaceae 119060 family 7496718 2 0 0 Aerococcus sanguinicola 119206 species 2033849 10 9 0 Cupriavidus metallidurans 119219 species 6913352 1 0 0 Francisella tularensis subsp. tularensis 119856 subspecies 11477619 10 1 0 Francisella tularensis subsp. holarctica 119857 subspecies 5680701 2 2 0 Acidithiobacillus 119977 genus 3059926 2 0 0 Pseudarthrobacter sulfonivorans 121292 species 5056151 32 28 0 Pannonibacter phragmitetus 121719 species 5669701 13 2 0 Nipah virus 121791 species 18246 2 2 0 Neisseria meningitidis MC58 122586 leaf 2272360 1 1 0 Neisseria meningitidis Z2491 122587 leaf 2184406 2 0 0 Persephonella marina EX-H1 123214 leaf 1983966 45 40 0 Tomato yellow leaf curl Sardinia virus 123735 species 2773 3 3 0 Bordetella trematum 123899 species 4485537 11 4 0 Thermotoga sp. RQ7 126738 species 1851618 6 0 0 Thermotoga sp. RQ2 126740 species 1877693 32 16 0 Stenotrophomonas acidaminiphila 128780 species 4138297 7 6 0 Bean rugose mosaic virus 128790 species 9553 1 1 0 Aerococcus urinaehominis 128944 species 1831400 20 13 2.57E-10 Geobacillus 129337 genus 3618448 14 11 0 Geobacillus subterraneus 129338 species 3474426 69 61 0 Xanthomonas oryzae pv. oryzicola 129394 leaf 48396989 18 0 0 Pseudocowpox virus 129726 species 145289 3 2 0 Human mastadenovirus C 129951 species 35958 2 0 0 Bovine mastadenovirus A 129953 species 34185 1 1 0 Carboxydothermus hydrogenoformans 129958 species 2401520 1 0 0 Human mastadenovirus E 130308 species 36615 1 1 0 Human mastadenovirus D 130310 species 34920 6 0 0 Yaba-like disease virus 132475 leaf 144575 1 0 0 secondary endosymbiont of Heteropsylla cubana 134287 species 1121596 29 29 0 Paraburkholderia fungorum 134537 species 9058983 123 7 5.45E-23 Mycobacterium goodii 134601 species 7105933 9 7 0 Actinoplanes sp. SE50/110 134676 species 9239851 20 18 0 Ureaplasma parvum 134821 species 743562 2 0 0 Bacillus subtilis subsp. subtilis 135461 subspecies 28727929 190 22 0 Nocardia cyriacigeorgica 135487 species 6194645 1 0 0 Chromatiales 135613 order 3510274 2 0 0 Xanthomonadales 135614 order 8942501 5 0 0 Oceanospirillaceae 135620 family 4135004 3 0 0 Pseudomonadaceae 135621 family 6079738 5 0 0 Alteromonadales 135622 order 4761259 1 0 0 Aeromonadales 135624 order 4772784 1 0 0 Pasteurellales 135625 order 2340871 18 0 0 Bacillus endophyticus 135735 species 5313985 90 83 0 Roseobacter phage SIO1 136084 species 39898 1 1 0 Corynebacterium testudinoris 136857 species 2721226 4 3 0 Macropodid herpesvirus 1 137443 species 140122 2 1 0 Weissella cibaria 137591 species 2577731 20 14 0 Azospirillum sp. B510 137722 leaf 7599738 58 39 0 Desulfitobacterium hafniense Y51 138119 leaf 5727534 80 13 0 Isoptericola variabilis 139208 species 3307740 5 0 0 Vibrio phage CTX 141904 species 10638 1 0 0 Salmonella enterica subsp. enterica serovar Tennessee 143221 leaf 4943967 1 0 0 Rathayibacter toxicus 145458 species 4674320 15 4 0 Corynebacterium simulans 146827 species 5336673 3 3 0 Prochlorococcus marinus str. AS9601 146891 leaf 1669886 30 15 0 Salinibacter 146918 genus 3710123 3 0 0 Streptomyces parvulus 146923 species 7766531 31 25 0 Thioalkalimicrobium cyclicum 147268 species 1932455 1 0 0 Carnobacterium inhibens 147709 species 2497115 1 0 0 Paraburkholderia phymatum 148447 species 8676562 11 0 0 Lactobacillus kunkeei 148814 species 1614522 25 23 0 Salmonella enterica subsp. enterica serovar Enteritidis 149539 leaf 84628571 3 3 0 Massilia 149698 genus 0 1 0 0 Marinitoga piezophila 149715 species 2244793 1 0 0 Blastomonas 150203 genus 0 1 0 0 Anoxybacillus 150247 genus 2846746 2 0 0 Anguillid herpesvirus 1 150286 species 248526 1 1 0 Vibrio antiquarius 150340 species 5089025 25 12 0 Lactococcus phage bIL285 151535 species 35538 1 0 0 Lactococcus phage bIL309 151537 species 36949 8 0 0 Lactococcus phage bIL312 151539 species 15179 1 0 0 Pseudopedobacter saltans 151895 species 4635236 1 0 0 Pseudoalteromonas issachenkonii 152297 species 4131541 49 9 0 Burkholderia ambifaria 152480 species 11349840 4 0 0 Burkholderia dolosa 152500 species 6409095 12 0 0 Gammaretrovirus 153135 genus 8261 88 0 0 Kozakia baliensis 153496 species 6599181 8 2 0 Nitrosomonas sp. AL212 153948 species 3337023 488 416 0 Macacine herpesvirus 5 154334 species 133719 1 1 0 Methanothermococcus 155862 genus 1677455 1 0 0 Caulobacter vibrioides 155892 species 4029938 2 0 0 Pestivirus Giraffe-1 155905 species 12602 15 0 0 Xylella fastidiosa subsp. sandyi Ann-1 155920 leaf 2780908 10 5 0 Magnetococcus marinus MC-1 156889 leaf 4719581 65 59 0 Corynebacterium imitans 156978 species 2565321 6 6 0 Pseudomonas parafulva 157782 species 5087619 12 11 0 Pseudomonas cremoricolorata 157783 species 4780403 14 11 0 Sulfolobus islandicus rod-shaped virus 1 157898 species 32308 1 1 0 Sulfolobus islandicus rod-shaped virus 2 157899 species 35450 1 0 0 Chromohalobacter salexigens 158080 species 3696649 2 0 0 Sphaerochaeta globosa str. Buddy 158189 leaf 3316466 29 24 0 Sphaerochaeta pleomorpha str. Grapes 158190 leaf 3590853 26 25 0 Hahella chejuensis 158327 species 7215267 1 0 0 Novosphingobium resinovorum 158500 species 6918128 155 20 1.54E-09 Diadromus pulchellus ascovirus 4a 158683 species 119343 2 2 0 Cedecea neteri 158822 species 23867322 140 60 0 Enterobacter hormaechei 158836 species 11766809 10 0 0 Collimonas fungivorans 158899 species 5186898 29 26 0 Dechloromonas aromatica RCB 159087 leaf 4501104 17 15 1.53E-16 Sathuperi virus 159141 species 12034 1 1 0 Shamonda virus 159150 species 12104 36 22 0 Planococcus citri densovirus 159153 leaf 5380 1 1 0 Pseudomonas putida KT2440 160488 leaf 6181873 14 6 0 Streptococcus pyogenes str. Manfredo 160491 leaf 1841271 8 0 0 Xylella fastidiosa 9a5c 160492 leaf 2731750 4 4 0 Acidihalobacter prosperus 160660 species 3566941 47 0 0 Sphingomonas wittichii 160791 species 5915246 2 0 0 Skunkpox virus 160796 species 222832 4 4 0 Paenibacillus borealis 160799 species 8156808 29 21 0 Pseudoalteromonas phenolica 161398 species 4868993 54 53 0 Anaeromyxobacter 161492 genus 5021404 2 0 0 Corynebacterium camporealensis 161896 species 2451810 2 2 0 Corynebacterium singulare 161899 species 2830519 3 3 0 Paenibacillus naphthalenovorans 162209 species 5200139 51 48 0 Thermococcus cleftensis 163003 species 1950313 3 3 0 Wolbachia endosymbiont of Drosophila melanogaster 163164 species 1267782 182 16 0 Streptomyces puniciscabiei 164348 species 9698948 17 16 0 Mycobacterium sp. MCS 164756 species 5920523 3 0 0 Mycobacterium sp. JLS 164757 species 6048425 2 0 0 Weissella koreensis 165096 species 1441470 2 0 0 Sphingobium 165695 genus 4499041 28 18 0 Novosphingobium 165696 genus 4845446 11 0 0 Sphingopyxis 165697 genus 3678564 5 0 0 Epinotia aporema granulovirus 166056 species 119082 1 1 0 Human endogenous retrovirus K113 166122 leaf 9472 2 0 0 Synechococcus sp. WH 8109 166314 species 2111515 7 2 0 Thermobaculum terrenum 166501 species 3101581 1 0 0 Prochlorococcus marinus subsp. marinus str. CCMP1375 167539 leaf 1751080 42 22 0 Prochlorococcus marinus str. MIT 9515 167542 leaf 1704176 52 43 0 Prochlorococcus marinus str. MIT 9301 167546 leaf 1641879 81 70 0 Prochlorococcus marinus str. NATL1A 167555 leaf 1864731 50 13 0 Colwellia psychrerythraea 34H 167879 leaf 5373180 55 45 0 Candidatus Ishikawaella capsulata 168169 species 754729 2 0 0 Laribacter 168470 genus 3169329 1 0 0 Hydrogenobaculum 168657 genus 0 6 0 0 Pseudomonas phage phiKZ 169683 species 280334 1 1 0 Paenibacillus stellifer 169760 species 5658798 437 8 0 Listeria monocytogenes EGD-e 169963 leaf 2944528 4 0 0 Streptococcus pneumoniae TIGR4 170187 leaf 2160842 10 1 0 Canid herpesvirus 1 170325 species 125171 7 7 0 Adoxophyes orana granulovirus 170617 species 99657 1 1 0 Perina nuda virus 170621 species 9476 19 0 0 Streptococcus pneumoniae R6 171101 leaf 2038615 7 0 0 Bacteroidales 171549 order 3634138 2 0 0 Porphyromonadaceae 171551 family 2919093 1 0 0 Elizabethkingia miricola 172045 species 4242519 97 83 0 Simian adenovirus 25 175567 leaf 36519 1 0 0 Staphylococcus epidermidis RP62A 176279 leaf 2643840 70 23 0 Staphylococcus epidermidis ATCC 12228 176280 leaf 2564615 26 2 0 Agrobacterium fabrum str. C58 176299 leaf 5674258 3 2 0 Invertebrate iridescent virus 6 176652 species 212482 3 3 0 Francisella tularensis subsp. tularensis SCHU S4 177416 leaf 3785564 14 1 0 Desulfobacterium autotrophicum HRM2 177437 leaf 5657782 74 42 0 Desulfotalea psychrophila LSv54 177439 leaf 3659634 61 59 0 Murine polyomavirus strain BG 179241 leaf 5307 2 2 0 Oscillatoria nigro-viridis PCC 7112 179408 leaf 8272254 93 83 0 Alicycliphilus denitrificans 179636 species 4953232 17 0 0 Infectious spleen and kidney necrosis virus 180170 species 111362 4 4 0 Cyprinid herpesvirus 3 180230 species 295146 194 41 0 Delftia tsuruhatensis 180282 species 7195716 130 101 0 Casphalia extranea densovirus 180586 leaf 5002 1 0 0 Bacillus thuringiensis serovar indiana 180850 leaf 6198448 25 8 0 Listeria phage 2389 181007 species 37618 1 0 0 Emiliania huxleyi virus 86 181082 species 407339 6 5 0 Helicobacter cetorum MIT 00-7128 182217 leaf 1960111 80 68 0 Oceanobacillus iheyensis 182710 species 3630528 2 0 0 Xylella fastidiosa Temecula1 183190 leaf 2521148 4 0 0 Thermoprotei 183924 class 2069204 2 0 0 Halobacteria 183963 class 3711836 1 0 0 Butyrivibrio hungatei 185008 species 3386314 70 67 0 Streptococcus pyogenes MGAS8232 186103 leaf 1895017 1 1 0 Candidatus Baumannia cicadellinicola 186490 species 686194 25 24 0 Pyrococcus furiosus DSM 3638 186497 leaf 1908256 28 9 0 Clostridia 186801 class 3776178 24 0 0 Clostridiales 186802 order 4134178 7 0 0 Lachnospiraceae 186803 family 4113116 2 0 0 Peptostreptococcaceae 186804 family 4343454 1 0 0 Peptococcaceae 186807 family 4011106 25 0 0 Thermoanaerobacteraceae 186814 family 2780621 6 0 0 Bacillaceae 186817 family 5268695 6 0 0 Paenibacillaceae 186822 family 6290359 2 0 0 Alicyclobacillaceae 186823 family 3238166 1 0 0 Lactobacillales 186826 order 2276508 4 0 0 Sneathia amnii 187101 species 1330224 30 29 0 T5virus 187218 genus 0 1 0 0 Alkalilimnicola ehrlichii MLHE-1 187272 leaf 3275944 2 2 0 Methylocystis sp. SC2 187303 species 3773444 1 0 0 Methanothermobacter thermautotrophicus str. Delta H 187420 leaf 1751377 16 6 0 Pediococcus claussenii 187452 species 1978793 55 0 0 Thalassolituus oleivorans 187493 species 3842190 4 0 0 Aquificae 187857 class 1915055 5 0 0 Panine herpesvirus 2 188763 species 241087 8 5 0 Deinococci 188787 class 3146184 4 0 0 Oleispira antarctica 188908 species 4406383 1 0 0 Pedobacter cryoconitis 188932 species 5950539 78 75 0 Methanosarcina acetivorans C2A 188937 leaf 5751492 33 29 0 Streptococcus pneumoniae 670-6B 189423 leaf 2240045 6 1 0 Paenibacillus graminis 189425 species 7166464 44 39 0 Paenibacillus odorifer 189426 species 6812473 155 52 0 Leptospira interrogans serovar Lai str. 56601 189518 leaf 4698134 35 0 0 Chrysiogenaceae 189770 family 2928377 1 0 0 Mycobacterium sp. KMS 189918 species 6256079 3 0 0 Fowl aviadenovirus E 190065 species 44055 1 1 0 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 190304 leaf 2174500 50 6 0 Clostridium phage phi3626 190478 species 33507 2 2 0 Xanthomonas campestris pv. campestris str. ATCC 33913 190485 leaf 5076188 3 1 0 Caulobacter crescentus CB15 190650 leaf 4016947 4 0 1.81E-10 Ralstonia insidiosa 190721 species 12164766 22 4 0 Vibrio coralliilyticus 190893 species 17260629 124 72 0 Rhodococcus aetherivorans 191292 species 5922748 5 4 0 Deferribacteraceae 191394 family 2627038 1 0 0 Chlorobia 191410 class 2624804 2 0 0 Chlorobiales 191411 order 2624804 1 0 0 Chlorobiaceae 191412 family 2624804 1 0 0 Fluviicola taffensis 191579 species 4633577 2 0 0 Corynebacterium atypicum 191610 species 2359448 2 2 0 Planococcus maritimus 192421 species 3280721 34 17 0 Phthorimaea operculella granulovirus 192584 species 119217 1 1 0 Rhodoferax ferrireducens 192843 species 4969784 6 0 0 Methanosarcina mazei Go1 192952 leaf 4096345 49 19 0 Streptococcus pyogenes SSI-1 193567 leaf 1894275 2 0 0 Chlorobium tepidum TLS 194439 leaf 2154946 18 15 0 Salmonella virus SP6 194966 species 43769 8 1 2.15E-08 Campylobacter jejuni RM1221 195099 leaf 1777831 6 1 0 Clostridium perfringens str. 13 195102 leaf 3085740 96 5 0 Clostridium perfringens ATCC 13124 195103 leaf 3256683 65 26 0 Synechococcus sp. PCC 8807 195248 species 3304088 10 1 0 Synechococcus sp. PCC 6312 195253 species 3720499 20 18 0 Synechococcus sp. PCC 7117 195498 species 3432101 14 4 0 Thermococcus nautili 195522 species 1976356 18 18 0 Methanocaldococcus 196118 genus 1584277 28 0 0 Nocardioides sp. JS614 196162 species 5293685 17 15 0 Corynebacterium efficiens YS-314 196164 leaf 3219505 2 0 0 Enterobacteria phage BP-4795 196242 species 57930 5 0 0 Vibrio vulnificus YJ016 196600 leaf 5260086 13 2 0 Staphylococcus aureus subsp. aureus MW2 196620 leaf 2820462 6 0 0 Corynebacterium glutamicum ATCC 13032 196627 leaf 6592109 2 0 0 Thermosynechococcus elongatus BP-1 197221 leaf 2593857 31 31 0 Enterobacteria phage RB14 197310 species 165429 1 0 0 Azoarcus sp. CIB 198107 species 5257030 3 2 0 Pseudomonas phage 201phi2-1 198110 species 316674 1 1 0 Shigella flexneri 2a str. 301 198214 leaf 4828820 1 0 0 Shigella flexneri 2a str. 2457T 198215 leaf 4599354 2 0 0 Streptococcus pyogenes MGAS315 198466 leaf 1900521 2 1 0 Anoxybacillus gonensis 198467 species 2803668 9 7 1.61E-10 Pseudomonas koreensis 198620 species 12292986 34 21 1.30E-15 Dickeya dadantii 3937 198628 leaf 4922802 11 2 0 Buchnera aphidicola str. Sg (Schizaphis graminum) 198804 leaf 641454 17 13 0 Pseudomonas syringae pv. lapsa 199201 leaf 5918899 30 4 8.27E-11 Escherichia coli CFT073 199310 leaf 5231428 2 0 0 Pseudomonas trivialis 200450 species 6452803 26 20 2.59E-19 Flavobacteriales 200644 order 3047933 1 0 0 Planococcus rifietoensis 200991 species 3505011 25 20 0 Actinobacteria 201174 phylum 4509230 1 0 0 Maize bushy stunt phytoplasma 202462 species 576118 19 11 0 Listeria ivanovii subsp. ivanovii 202751 subspecies 2919548 53 0 0 Listeria ivanovii subsp. londoniensis 202752 subspecies 6038527 78 27 0 Collimonas 202907 genus 5186898 4 0 0 Actinobacillus equuli subsp. equuli 202947 subspecies 2431533 11 5 0 Ruminiclostridium thermocellum ATCC 27405 203119 leaf 3843301 56 19 0 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 203120 leaf 2075763 27 6 0 Saccharophagus degradans 2-40 203122 leaf 5057531 26 26 0 Oenococcus oeni PSU-1 203123 leaf 1780517 85 34 0 Trichodesmium erythraeum IMS101 203124 leaf 7750108 141 131 0 Tropheryma whipplei str. Twist 203267 leaf 927303 12 9 0 Tannerella forsythia 92A2 203275 leaf 3405521 57 4 0 Fusobacteriales 203491 order 2855633 40 0 0 Planctomycetia 203683 class 6682242 2 0 0 Nitrospira 203693 class 2325020 1 0 0 Candidatus Blochmannia floridanus 203907 species 705557 58 55 0 Dickeya 204037 genus 4798348 1 0 0 Chlamydiia 204429 class 1167399 1 0 0 Acidobacteriales 204433 order 5307061 5 0 0 Mamestra configurata nucleopolyhedrovirus B 204440 species 158482 3 1 0 Rhodospirillales 204441 order 3818054 6 0 0 Rhodobacterales 204455 order 4316169 2 0 0 Sphingomonadales 204457 order 3692548 2 0 0 Neodiprion abietis NPV 204507 species 84264 1 1 0 Sulfurihydrogenibium azorense Az-Fu1 204536 leaf 1640877 61 59 0 Candidatus Koribacter versatilis Ellin345 204669 leaf 5650368 17 13 0 Herminiimonas arsenicoxydans 204773 species 3424307 10 4 6.25E-17 Xenopus laevis endogenous retrovirus Xen1 204873 species 10207 1 0 0 Novosphingobium pentaromativorans 205844 species 5457578 1 0 0 Bifidobacterium longum DJO10A 205913 leaf 2389526 1 0 0 Haemophilus somnus 129PT 205914 leaf 2012878 29 16 0 Pseudomonas syringae pv. syringae B728a 205918 leaf 6093698 9 1 0 Ehrlichia chaffeensis str. Arkansas 205920 leaf 1176248 17 1 0 Pseudomonas fluorescens Pf0-1 205922 leaf 6438405 2 2 0 Methylophilales 206350 order 2915241 1 0 0 Neisseriales 206351 order 2373297 3 0 0 Nitrosomonadaceae 206379 family 3009585 1 0 0 Sulfurovum lithotrophicum 206403 species 2217891 31 28 0 Bifidobacterium longum NCC2705 206672 leaf 2260266 2 1 0 Bovine foamy virus 207343 species 12002 1 0 0 Desulfovibrio alaskensis G20 207559 leaf 3730232 26 15 0 Croton yellow vein mosaic virus 207697 species 2757 1 1 0 Mamestra configurata nucleopolyhedrovirus A 207830 species 155060 2 2 0 Agrotis ipsilon multiple nucleopolyhedrovirus 208013 species 155122 1 1 0 Enterobacter kobei 208224 species 4927478 10 3 0 Streptococcus agalactiae 2603V/R 208435 leaf 2160267 12 10 0 Amycolatopsis japonica 208439 species 9053857 222 6 0 Carnobacterium sp. 17-4 208596 species 2685399 53 50 0 Escherichia albertii 208962 species 4701875 50 34 0 Choristoneura fumiferana multiple nucleopolyhedrovirus 208973 species 129593 2 0 0 Salmonella enterica subsp. enterica serovar Typhi str. Ty2 209261 leaf 4791961 1 0 0 Streptococcus mutans UA159 210007 leaf 2032925 35 0 0 Influenza A virus (A/Puerto Rico/8/1934(H1N1)) 211044 leaf 13588 1 1 0 Streptococcus agalactiae NEM316 211110 leaf 2211485 1 1 0 Shewanella oneidensis MR-1 211586 leaf 5131424 22 20 0 Acanthamoeba polyphaga mimivirus 212035 species 1181549 43 40 0 Anaplasma phagocytophilum str. HZ 212042 leaf 1471282 6 0 0 Clostridium tetani E88 212717 leaf 2873333 83 24 0 Mycobacterium sp. JS623 212767 species 7221766 82 10 0 Desulfovibrionales 213115 order 3511273 3 0 0 Desulfobacteraceae 213119 family 5329231 1 0 0 Desulfuromonadaceae 213421 family 3953506 2 0 0 Geobacteraceae 213422 family 4227210 2 0 0 Bdellovibrionaceae 213483 family 3359107 1 0 0 Halomonas campaniensis 213554 species 4074048 15 2 0 Methanosarcina mazei S-6 213585 leaf 4142816 40 2 0 Yersinia pestis CO92 214092 leaf 9552707 6 0 0 Leptospira interrogans serovar Manilae 214675 leaf 9334759 130 0 0 Erwinia sp. Ejp617 215689 species 3957675 8 5 0 Pseudomonas rhizosphaerae 216142 species 4688635 57 4 0 Dehalococcoides mccartyi BAV1 216389 leaf 1341892 7 7 0 Croceibacter atlanticus HTCC2559 216432 leaf 2952962 67 64 0 Polaromonas naphthalenivorans 216465 species 5366143 1 0 0 Burkholderia cenocepacia J2315 216591 leaf 8055782 2 1 0 Escherichia coli 042 216592 leaf 5355323 5 4 0 Mycobacterium marinum M 216594 leaf 6660144 27 1 0 Pseudomonas fluorescens SBW25 216595 leaf 6722539 15 8 0 Rhizobium leguminosarum bv. viciae 3841 216596 leaf 7751309 1 1 0 Shigella sonnei 53G 216599 leaf 5220473 12 0 0 Stenotrophomonas rhizophila 216778 species 4198652 8 3 1.11E-10 Bifidobacterium longum 216816 species 3125541 11 3 0 Vibrio vulnificus CMCP6 216895 leaf 5126696 23 2 0 Spiroplasma helicoides 216938 species 1326546 43 27 0 Pectobacterium atrosepticum SCRI1043 218491 leaf 5064019 35 4 0 Salmonella bongori NCTC 12419 218493 leaf 4460105 17 5 0 Streptococcus uberis 0140J 218495 leaf 1852352 40 40 0 Tropheryma whipplei TW08/27 218496 leaf 925938 8 5 0 Chlamydia abortus S26/3 218497 leaf 1144377 16 0 0 Lactobacillus casei subsp. casei ATCC 393 219334 leaf 2952961 20 11 0 Pseudomonas antarctica 219572 species 6607040 21 19 0 Salmonella enterica subsp. enterica serovar Typhi str. CT18 220341 leaf 5133713 3 0 0 Pseudomonas protegens Pf-5 220664 leaf 7074893 12 2 0 Lactobacillus plantarum WCFS1 220668 leaf 3348624 3 2 0 Treponema putidum 221027 species 2800562 40 33 0 Oceanobacillus iheyensis HTE831 221109 leaf 3630528 53 52 0 Staphylococcus virus K 221915 species 148317 2 0 0 Mannheimia succiniciproducens MBEL55E 221988 leaf 2314078 40 39 0 Helicobacter sp. MIT 01-6242 222136 species 1594790 26 20 0 Squash leaf curl Yunnan virus 222474 species 2714 1 1 0 Bacillus cereus ATCC 10987 222523 leaf 5432652 83 58 0 Mycobacterium chimaera 222805 species 6328534 5 1 0 Neorickettsia sennetsu str. Miyayama 222891 leaf 859006 7 5 0 [Pseudomonas syringae] pv. tomato str. DC3000 223283 leaf 6538260 36 16 0 Vibrio phage VGJphi 223524 species 7542 7 0 0 Vibrio parahaemolyticus RIMD 2210633 223926 leaf 5165770 8 3 0 Aquifex aeolicus VF5 224324 leaf 1590791 32 28 0 Archaeoglobus fulgidus DSM 4304 224325 leaf 2178400 9 0 0 Borrelia burgdorferi B31 224326 leaf 1521208 61 1 0 Nautiliaceae 224467 family 1676444 4 0 0 Methanobrevibacter sp. AbM4 224719 species 1998189 39 33 0 Methanomicrobia 224756 class 3576094 1 0 0 Bradyrhizobium diazoefficiens USDA 110 224911 leaf 18211892 36 0 0 Buchnera aphidicola str. Bp (Baizongia pistaciae) 224915 leaf 618379 9 9 0 Acidithiobacillaceae 225058 family 3059926 1 0 0 Shewanella piezotolerans WP3 225849 leaf 5396476 49 47 0 Marinobacter adhaerens HP15 225937 leaf 4651725 13 6 0 Enterococcus faecalis V583 226185 leaf 3359974 27 11 0 Bacteroides thetaiotaomicron VPI-5482 226186 leaf 6293399 80 44 0 Bacillus cereus ATCC 14579 226900 leaf 5427083 23 11 0 Coxiella burnetii RSA 493 227377 leaf 2032674 9 0 0 Aeromonas virus Aeh1 227470 species 233234 2 0 0 Strawberry pallidosis-associated virus 227507 species 8066 3 3 0 Pannonibacter 227873 genus 0 1 0 0 Streptomyces avermitilis MA-4680 = NBRC 14893 227882 leaf 9119895 27 23 0 Chlamydophila caviae GPIC 227941 leaf 1181356 33 31 0 Haemophilus somnus 2336 228400 leaf 2263857 26 13 0 Hyphomonas neptunium ATCC 15444 228405 leaf 3705021 5 4 0 Nitrosomonas europaea ATCC 19718 228410 leaf 2812094 17 16 0 Photorhabdus temperata subsp. thracensis 230089 subspecies 5147098 88 61 0 Haemophilus phage Aaphi23 230158 species 43033 1 0 0 Methanobrevibacter millerae 230361 species 2543538 207 179 0 Streptococcus phage C1 230871 species 16687 4 4 0 Pseudomonas putida ND6 231023 leaf 6202452 12 1 0 Acidovorax sp. JS42 232721 species 4585154 8 1 1.46E-14 Alteromonas stellipolaris 233316 species 4686200 152 58 0 Haemophilus ducreyi 35000HP 233412 leaf 1698955 7 0 0 Candidatus Solibacter usitatus Ellin6076 234267 leaf 9965640 38 15 0 Rhodococcus erythropolis PR4 234621 leaf 6895538 4 0 0 Anaplasma marginale str. St. Maries 234826 leaf 1197687 12 0 0 Pseudoalteromonas sp. SM9913 234831 species 4037671 42 2 0 Helicobacter hepaticus ATCC 51449 235279 leaf 1799146 30 27 0 Geobacillus kaustophilus HTA426 235909 leaf 3592666 6 1 4.65E-15 Pseudomonas alkylphenolia 237609 species 5764622 8 7 0 Akkermansia muciniphila 239935 species 2664102 32 26 0 Acidobacterium capsulatum ATCC 51196 240015 leaf 4127356 26 18 0 Lactobacillus paracollinoides 240427 species 10733574 195 7 0 Pseudonocardia dioxanivorans 240495 species 7303989 5 0 0 Rummeliibacillus stabekisii 241244 species 3420739 5050 5016 0 Neisseria gonorrhoeae FA 1090 242231 leaf 2153922 6 2 0 Porphyromonas gingivalis W83 242619 leaf 2343476 14 5 0 Rhodopirellula baltica SH 1 243090 leaf 7145576 18 16 0 Acidithiobacillus ferrooxidans ATCC 23270 243159 leaf 2982397 11 0 0 Chlamydia muridarum str. Nigg 243161 leaf 1080451 1 1 0 Dehalococcoides mccartyi 195 243164 leaf 1469720 6 2 0 Deinococcus radiodurans R1 243230 leaf 6628921 23 13 0 Geobacter sulfurreducens PCA 243231 leaf 3814128 18 14 0 Methanocaldococcus jannaschii DSM 2661 243232 leaf 1739927 49 27 0 Methylococcus capsulatus str. Bath 243233 leaf 3304561 6 6 0 Mycobacterium avium 104 243243 leaf 5475491 4 0 0 Photorhabdus luminescens subsp. laumondii TTO1 243265 leaf 5688987 105 93 0 Mycoplasma arthritidis 158L3-1 243272 leaf 820453 21 20 0 Mycoplasma genitalium G37 243273 leaf 580076 28 0 0 Thermotoga maritima MSB8 243274 leaf 7469591 18 1 0 Treponema denticola ATCC 35405 243275 leaf 2843201 36 28 0 Treponema pallidum subsp. pallidum str. Nichols 243276 leaf 1138011 13 0 0 Chromobacterium violaceum ATCC 12472 243365 leaf 4751080 13 11 0 Klebsiella variicola 244366 species 5458505 45 4 0 Sulfolobus spindle-shaped virus 1 244589 species 15465 23477 21829 2.11E-07 Carboxydothermus hydrogenoformans Z-2901 246194 leaf 2401520 22 19 0 Dichelobacter nodosus VCS1703A 246195 leaf 1389350 31 31 0 Myxococcus xanthus DK 1622 246197 leaf 9139763 12 10 0 Prevotella intermedia 17 246198 leaf 2699437 27 15 0 Ruegeria pomeroyi DSS-3 246200 leaf 4601048 46 45 0 Wolbachia endosymbiont of Cimex lectularius 246273 species 1250060 27 21 0 Staphylococcus equorum 246432 species 8544915 184 38 0 Bacteroides cellulosilyticus 246787 species 7084828 73 66 0 Thermococcus sp. AM4 246969 species 2086428 581 482 0 Nocardia farcinica IFM 10152 247156 leaf 6292344 63 27 0 Cupriavidus pinatubonensis 248026 species 7255290 2 0 0 Gloeobacter violaceus PCC 7421 251221 leaf 4659019 15 12 0 Chroococcidiopsis thermalis PCC 7203 251229 leaf 6689401 58 45 0 Phaeocystis globosa virus 251749 species 459984 5 5 0 Microbulbifer thermotolerans 252514 species 3938396 27 24 0 Pieris rapae granulovirus 252584 species 108592 1 1 0 Paraburkholderia phenoliruptrix 252970 species 7651131 8 0 0 Ehrlichia ruminantium str. Welgevonden 254945 leaf 3029332 688 0 0 Fictibacillus arsenicus 255247 species 4055461 73 66 0 Dehalococcoides mccartyi CBDB1 255470 leaf 1395502 1 0 0 Chlorobaculum 256319 genus 2222097 10 0 0 Glutamicibacter arilaitensis 256701 species 3918192 5 5 0 Lymphocystis disease virus - isolate China 256729 species 186250 5 5 0 Corynebacterium diphtheriae NCTC 13129 257309 leaf 2488635 2 0 0 Bordetella bronchiseptica RB50 257310 leaf 5339179 10 2 0 Bordetella parapertussis 12822 257311 leaf 4773551 20 0 0 Lactobacillus johnsonii NCC 533 257314 leaf 1992676 18 7 0 Rickettsia typhi str. Wilmington 257363 leaf 1111496 31 0 0 Rhodopseudomonas palustris CGA009 258594 leaf 5467640 8 4 4.57E-15 Psychrobacter arcticus 273-4 259536 leaf 2650701 27 25 0 Methanococcoides burtonii DSM 6242 259564 leaf 2575032 73 65 0 Aeromonas virus 65 260149 species 235229 3 1 0 Heliothis virescens ascovirus 3e 260797 leaf 186262 4 3 0 Psychrobacter alimentarius 261164 species 3349444 18 14 0 Nitrosomonas sp. Is79A3 261292 species 3783444 85 75 1.24E-10 Paraburkholderia phytofirmans 261302 species 8214658 77 0 0 Buchnera aphidicola (Cinara tujafilina) 261317 leaf 444925 22 22 0 Vibrio phage VP882 261726 species 38197 2 2 0 Kangiella 261963 genus 2852073 2 0 0 Mycobacterium avium subsp. paratuberculosis K-10 262316 leaf 4829781 10 0 0 Lysobacter gummosus 262324 species 6056618 14 6 0 Exiguobacterium sibiricum 255-15 262543 leaf 3040786 30 14 0 Mycoplasma hyopneumoniae J 262719 leaf 897405 7 1 0 Mycoplasma hyopneumoniae 7448 262722 leaf 920079 7 1 0 Mycoplasma synoviae 53 262723 leaf 799476 66 4 0 Thermus thermophilus HB27 262724 leaf 2127482 20 4 0 Haemophilus influenzae R2846 262727 leaf 1819370 3 2 0 Haemophilus influenzae R2866 262728 leaf 1932306 45 36 0 Onion yellows phytoplasma OY-M 262768 leaf 853092 32 25 0 Singapore grouper iridovirus 262968 species 140131 24 19 0 Verrucosispora maris AB-18-032 263358 leaf 6732271 10 7 0 Yersinia aleksiciae 263819 species 4000307 37 18 0 Picrophilus torridus DSM 9790 263820 leaf 1545895 34 32 0 Ralstonia eutropha JMP134 264198 leaf 7255290 43 12 0 Streptococcus thermophilus LMG 18311 264199 leaf 1796846 1 0 0 Chlamydia felis Fe/C-56 264202 leaf 1173791 25 23 0 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 264203 leaf 2056363 10 8 0 Streptomyces hygroscopicus subsp. limoneus 264445 subspecies 10537932 21 2 0 Bdellovibrio bacteriovorus HD100 264462 leaf 3782950 37 17 0 Bacillus muralis 264697 species 5007018 48 41 0 Pseudomonas savastanoi pv. phaseolicola 1448A 264730 leaf 6112448 22 10 0 Prevotella ruminicola 23 264731 leaf 3619559 25 21 0 Moorella thermoacetica ATCC 39073 264732 leaf 2628784 6 0 0 Methylobacillus flagellatus KT 265072 leaf 2971517 8 6 0 Mesoplasma florum L1 265311 leaf 793224 30 7 0 Hyposoter fugitivus ichnovirus 265522 species 246092 2 1 0 Methylovorus glucosotrophus 266009 species 3082007 5 0 0 Rubrobacter xylanophilus DSM 9941 266117 leaf 3225748 10 10 0 Cupriavidus metallidurans CH34 266264 leaf 6913352 22 14 0 Paraburkholderia xenovorans LB400 266265 leaf 19434089 24 6 0 Chelativorans sp. BNC1 266779 species 4935185 14 13 0 Sinorhizobium meliloti 1021 266834 leaf 6691694 9 0 0 Mesorhizobium loti MAFF303099 266835 leaf 7596297 12 4 0 Kineococcus radiotolerans SRS30216 = ATCC BAA-149 266940 leaf 4956672 13 8 0 Sphingopyxis granuli 267128 species 4679853 7 5 0 Methanococcus maripaludis S2 267377 leaf 1661137 75 5 0 Ralstonia solanacearum GMI1000 267608 leaf 5810922 6 1 0 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 267671 leaf 4627366 49 8 0 Propionibacterium acnes KPA171202 267747 leaf 2560265 2 1 0 Mycoplasma mobile 163K 267748 leaf 777079 44 37 0 Natronomonas moolapensis 8.8.11 268739 leaf 2912573 5 2 0 Prochlorococcus phage P-SSM2 268746 species 252401 5 5 0 Synechococcus elongatus PCC 6301 269084 leaf 2696255 2 0 0 Sulfolobus turreted icosahedral virus 1 269145 species 17663 1 1 0 Nitratiruptor 269258 genus 0 1 0 0 Burkholderia vietnamiensis G4 269482 leaf 8391070 10 1 0 Ehrlichia canis str. Jake 269484 leaf 1315030 103 74 0 Rhodospirillum rubrum ATCC 11170 269796 leaf 4406557 21 0 0 Methanosarcina barkeri str. Fusaro 269797 leaf 4873766 76 49 0 Cytophaga hutchinsonii ATCC 33406 269798 leaf 4433218 98 94 0 Geobacter metallireducens GS-15 269799 leaf 4011182 82 71 0 Thermobifida fusca YX 269800 leaf 3642249 122 49 0 Bacillus cereus G9241 269801 leaf 5720073 47 7 0 Methylobacterium aquaticum 270351 species 7557960 97 63 0 Bombyx mori nucleopolyhedrovirus 271108 species 128413 5 0 0 Burkholderia thailandensis E264 271848 leaf 6723972 2 0 0 Anabaena cylindrica PCC 7122 272123 leaf 7063285 219 143 0 Nostoc punctiforme 272131 species 9059191 6 0 0 Aggregatibacter actinomycetemcomitans HK1651 272556 leaf 4210883 35 2 0 Bacillus halodurans C-125 272558 leaf 4202352 24 22 0 Bacteroides fragilis NCTC 9343 272559 leaf 5241700 20 3 0 Burkholderia pseudomallei K96243 272560 leaf 14495161 2 0 0 Clostridium acetobutylicum ATCC 824 272562 leaf 4132880 145 0 0 Clostridioides difficile 630 272563 leaf 8572939 175 1 0 Desulfitobacterium hafniense DCB-2 272564 leaf 5279134 73 2 0 Geobacillus stearothermophilus 10 272567 leaf 3676494 15 4 0 Gluconacetobacter diazotrophicus PA1 5 272568 leaf 7914538 40 13 0 Haloarcula marismortui ATCC 43049 272569 leaf 4274642 8 8 0 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 272620 leaf 5694894 1 0 0 Lactobacillus acidophilus NCFM 272621 leaf 1993560 36 0 0 Lactococcus lactis subsp. cremoris SK11 272622 leaf 2598348 40 4 0 Lactococcus lactis subsp. lactis Il1403 272623 leaf 2365589 37 0 0 Listeria innocua Clip11262 272626 leaf 3093113 70 46 0 Methylobacterium extorquens AM1 272630 leaf 6879778 20 11 1.76E-14 Mycobacterium leprae TN 272631 leaf 3268203 6 0 0 Mycoplasma mycoides subsp. mycoides SC str. PG1 272632 leaf 1211703 3 0 0 Mycoplasma penetrans HF-2 272633 leaf 1358633 57 49 0 Mycoplasma pulmonis UAB CTIP 272635 leaf 963879 28 27 0 Pasteurella multocida subsp. multocida str. Pm70 272843 leaf 2257487 24 11 0 Pyrococcus abyssi GE5 272844 leaf 1768562 26 25 0 Rhodobacter capsulatus SB 1003 272942 leaf 3871920 9 7 0 Rickettsia conorii str. Malish 7 272944 leaf 1268755 2 1 0 Spiroplasma kunkelii CR2-3x 273035 leaf 1514561 70 62 0 Staphylococcus aureus RF122 273036 leaf 2742531 4 4 0 Sulfolobus solfataricus P2 273057 leaf 2992245 18 3 0 Sulfolobus tokodaii str. 7 273063 leaf 2694756 92 88 0 Caldanaerobacter subterraneus subsp. tengcongensis MB4 273068 leaf 2689445 194 81 0 Thermoplasma acidophilum DSM 1728 273075 leaf 1564906 11 11 0 Thermoplasma volcanium GSS1 273116 leaf 1584804 18 18 0 Ureaplasma parvum serovar 3 str. ATCC 700970 273119 leaf 751719 29 0 0 Wolinella succinogenes DSM 1740 273121 leaf 2110355 15 15 0 Yersinia pseudotuberculosis IP 32953 273123 leaf 9680328 13 1 0 Serratia marcescens subsp. marcescens Db11 273526 leaf 5113802 8 5 0 Chlorobaculum limnaeum 274537 species 2797276 3 2 0 Mycobacterium gilvum Spyr1 278137 leaf 5783292 19 2 0 Mesorhizobium ciceri biovar biserrulae 278148 leaf 6880454 3 1 0 Pediococcus pentosaceus ATCC 25745 278197 leaf 1832387 19 2 0 Streptomyces ambofaciens ATCC 23877 278992 leaf 8393598 33 8 0 Bacillus licheniformis DSM 13 = ATCC 14580 279010 leaf 8445242 48 0 0 Collimonas arenae 279058 species 15078336 39 15 0 Collimonas pratensis 279113 species 11315924 21 2 0 Novosphingobium aromaticivorans DSM 12444 279238 leaf 4233314 32 15 2.60E-10 Lactobacillus phage phiAT3 279281 leaf 39166 5 0 0 Phage phiJL001 279383 species 63649 1 1 0 Staphylococcus haemolyticus JCSC1435 279808 leaf 2697861 60 36 0 Leptospira borgpetersenii serovar Ballum 280505 leaf 4037579 56 24 0 Leifsonia xyli subsp. xyli str. CTCB07 281090 leaf 2584158 11 10 0 [Bacillus thuringiensis] serovar konkukian str. 97-27 281309 leaf 5314794 27 12 0 Haemophilus influenzae 86-028NP 281310 leaf 1914490 39 0 0 Staphylococcus aureus subsp. aureus MRSA252 282458 leaf 2902619 4 0 0 Staphylococcus aureus subsp. aureus MSSA476 282459 leaf 2820454 8 0 0 Bartonella quintana str. Toulouse 283165 leaf 1581384 32 14 0 Bartonella henselae str. Houston-1 283166 leaf 1931047 23 5 0 Pseudoalteromonas sp. Bsw20308 283699 species 4830226 71 52 0 Staphylococcus pseudintermedius 283734 species 2594798 64 6 0 Stackebrandtia 283810 genus 6841557 1 0 0 Idiomarina loihiensis L2TR 283942 leaf 2839318 7 0 0 Phenylobacterium zucineum 284016 species 4379231 2 0 0 Streptomyces rubrolavendulae 285473 species 6543262 22 20 0 Sulfuricurvum 286130 genus 2819357 6 0 0 Streptococcus pyogenes MGAS10394 286636 leaf 1899877 1 0 0 Alteromonas addita 287094 species 4649146 62 3 0 Bradyrhizobium sp. BTAi1 288000 species 8493513 11 7 5.69E-19 Bacillus cereus E33L 288681 leaf 11690016 107 38 0 Renibacterium salmoninarum ATCC 33209 288705 leaf 3155250 27 27 0 Thermodesulfovibrio yellowstonii DSM 11347 289376 leaf 2003803 60 55 0 Thermodesulfobacterium commune DSM 2178 289377 leaf 1764045 45 42 0 Mycoplasma bovis PG45 289397 leaf 1003404 8 5 0 Chlorobium limicola DSM 245 290315 leaf 2763181 16 13 0 Chlorobium phaeobacteroides DSM 266 290317 leaf 3133902 28 23 0 Chlorobium phaeovibrioides DSM 265 290318 leaf 1966858 22 19 0 Citrobacter koseri ATCC BAA-895 290338 leaf 4735357 10 9 0 Cronobacter sakazakii ATCC BAA-894 290339 leaf 4530777 18 5 0 Paenarthrobacter aurescens TC1 290340 leaf 5226648 11 2 0 Anaeromyxobacter dehalogenans 2CP-C 290397 leaf 5013479 19 8 0 Chromohalobacter salexigens DSM 3043 290398 leaf 3696649 26 13 0 Arthrobacter sp. FB24 290399 species 5070478 14 9 0 Jannaschia sp. CCS1 290400 species 4404049 1 1 0 Clostridium beijerinckii NCIMB 8052 290402 leaf 6000632 203 0 0 Advenella 290425 genus 4594002 1 0 0 Borreliella bavariensis PBi 290434 leaf 986914 26 6 0 Prosthecochloris aestuarii DSM 271 290512 leaf 2579695 3 3 0 Gluconobacter oxydans 621H 290633 leaf 2922384 3 2 0 Helicobacter pylori 51 290847 leaf 1589954 10 5 0 Photorhabdus asymbiotica 291112 species 5094138 53 46 0 Candidatus Blochmannia pennsylvanicus str. BPEN 291272 leaf 791654 8 2 0 Trichechus manatus papillomavirus 1 291589 leaf 7722 46 42 0 White clover cryptic virus 1 292052 species 3663 2 0 0 Ruegeria sp. TM1040 292414 species 4153699 10 5 0 Thiobacillus denitrificans ATCC 25259 292415 leaf 2909809 5 5 0 Symbiobacterium thermophilum IAM 14863 292459 leaf 3566135 10 10 0 Cyanobium gracile PCC 6307 292564 leaf 3342364 10 7 0 Flavonifractor plautii 292800 species 3818500 211 176 0 Wolbachia endosymbiont strain TRS of Brugia malayi 292805 leaf 1080084 7 2 0 Sphingopyxis sp. 113P3 292913 species 4664213 4 2 0 Martelella 293088 genus 0 1 0 0 Haloquadratum walsbyi 293091 species 3219918 1 0 0 Haloquadratum 293431 genus 3219918 1 0 0 Rickettsia canadensis str. McKiel 293613 leaf 1159772 20 5 0 Rickettsia akari str. Hartford 293614 leaf 1231060 33 19 0 Alkaliphilus metalliredigens QYMF 293826 leaf 4929566 93 92 0 Flavobacterium phage 11b 294631 species 36012 5 4 0 Methanobrevibacter olleyae 294671 species 2201192 281 162 0 Anoxybacillus amylolyticus 294699 species 3158269 60 56 0 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 295319 leaf 4585229 1 0 0 Mycoplasma hyopneumoniae 232 295358 leaf 892758 6 2 0 Bacteroides fragilis YCH46 295405 leaf 5310990 50 3 0 Polaromonas sp. JS666 296591 species 5898676 32 17 8.53E-16 Legionella pneumophila str. Lens 297245 leaf 3405519 20 0 0 Legionella pneumophila str. Paris 297246 leaf 3635495 9 0 0 Lactococcus piscium MKFS47 297352 leaf 2503066 43 37 0 Turkey siadenovirus A 298333 species 52526 6 0 0 Photobacterium profundum SS9 298386 leaf 6403280 48 38 0 Frankia sp. EAN1pec 298653 species 8982042 17 14 0 Frankia inefficax 298654 species 8815781 13 8 0 Enterobacter hormaechei subsp. steigerwaltii 299766 subspecies 15295247 43 12 0 Enterobacter ludwigii 299767 species 4952770 27 3 0 Streptococcus thermophilus CNRZ1066 299768 leaf 1796226 1 0 0 Shigella dysenteriae Sd197 300267 leaf 4560911 13 4 0 Shigella boydii Sb227 300268 leaf 4646520 9 2 0 Shigella sonnei Ss046 300269 leaf 5055316 8 0 0 Thermus thermophilus HB8 300852 leaf 2116056 16 1 0 Enterobacter hormaechei subsp. oharae 301102 subspecies 14941448 910 13 0 Enterobacter hormaechei subsp. hormaechei 301105 subspecies 5063734 13 2 0 Ehrlichia ruminantium str. Gardel 302409 leaf 1499920 353 6 0 Bifidobacterium animalis subsp. animalis 302912 subspecies 1800480 6 5 0 Herminiimonas 303379 genus 0 2 0 0 Deerpox virus W-848-83 305674 species 166259 4 4 0 Campylobacter lari RM2100 306263 leaf 1571661 66 34 0 Corynebacterium jeikeium K411 306537 leaf 2476822 13 3 0 Euproctis pseudoconspersa nucleopolyhedrovirus 307467 species 141291 2 2 0 Staphylococcus phage 812 307898 species 142096 2 0 0 Elizabethkingia 308865 genus 4154397 2 0 0 Acidianus rod-shaped virus 1 309181 species 24655 1 1 0 Coprothermobacter proteolyticus DSM 5265 309798 leaf 1424912 7 7 0 Dictyoglomus thermophilum H-6-12 309799 leaf 1959987 38 37 0 Haloferax volcanii DS2 309800 leaf 4012900 10 10 0 Thermomicrobium roseum DSM 5159 309801 leaf 2920744 2 2 0 Thermotoga neapolitana DSM 4359 309803 leaf 1884562 6 0 0 Salinibacter ruber DSM 13855 309807 leaf 3587328 15 2 0 Agrobacterium vitis S4 311402 leaf 6320946 8 7 0 Agrobacterium radiobacter K84 311403 leaf 7273300 4 2 0 Dehalococcoides mccartyi VS 311424 leaf 1413462 34 21 0 Polynucleobacter asymbioticus QLW-P1DMWA-1 312153 leaf 2159490 29 2 6.56E-15 Emticicia 312278 genus 5220361 1 0 0 Vibrio fischeri ES114 312309 leaf 4273718 54 53 0 Dokdonia sp. MED134 313590 species 3302548 42 28 0 Psychroflexus torquis ATCC 700755 313595 leaf 4321832 111 102 0 Robiginitalea biformata HTCC2501 313596 leaf 3530383 11 10 0 Polaribacter sp. MED152 313598 species 2961474 113 106 7.17E-15 Maribacter sp. HTCC2170 313603 species 3868304 36 34 0 Erythrobacter litoralis HTCC2594 314225 leaf 3052398 1 0 0 Parvularcula bermudensis HTCC2503 314260 leaf 2902643 4 4 0 Alteromonas mediterranea 314275 species 4592176 64 23 0 Psychromonas sp. CNPT3 314282 species 3052410 112 38 0 Lactobacillus sakei subsp. sakei 23K 314315 leaf 1884661 12 11 0 Xanthomonas campestris pv. campestris str. 8004 314565 leaf 5148708 23 10 0 Pseudoxanthomonas suwonensis 314722 species 3419049 24 22 0 Borrelia turicatae 91E135 314724 leaf 917330 66 20 0 Streptococcus gallolyticus 315405 species 2363453 113 78 0 Rickettsia felis URRWXCal2 315456 leaf 1587240 23 16 0 Bacillus weihenstephanensis KBAB4 315730 leaf 5872743 94 50 0 Bacillus cytotoxicus NVH 391-98 315749 leaf 4094159 94 62 0 Bacillus pumilus SAFR-032 315750 leaf 3704641 35 15 0 Acidianus two-tailed virus 315953 species 62730 4 3 0 Rhodopseudomonas palustris BisA53 316055 leaf 5505494 1 1 0 Rhodopseudomonas palustris BisB18 316056 leaf 5513844 7 6 4.23E-10 Rhodopseudomonas palustris BisB5 316057 leaf 4892717 2 0 0 Rhodopseudomonas palustris HaA2 316058 leaf 5331656 15 15 0 Geobacter daltonii FRC-32 316067 leaf 4304501 22 22 0 Xanthomonas campestris pv. vesicatoria str. 85-10 316273 leaf 10838435 10 0 0 Aliivibrio salmonicida LFI1238 316275 leaf 4655660 261 243 0 Synechococcus sp. RCC307 316278 species 2224914 61 60 0 Synechococcus sp. CC9902 316279 species 2234828 6 4 0 Streptomyces noursei ATCC 11455 316284 leaf 9815884 25 14 0 Escherichia coli str. K-12 substr. DH10B 316385 leaf 4686137 6 6 0 Escherichia coli ETEC H10407 316401 leaf 5325888 1 1 0 Escherichia coli Nissle 1917 316435 leaf 5441200 1 0 0 Methylibium 316612 genus 4643639 2 0 0 Thiomicrospira crunogena XCL-2 317025 leaf 2427734 24 19 0 Sphingopyxis alaskensis RB2256 317655 leaf 3373713 2 2 0 Cyprinid herpesvirus 1 317858 species 291144 680 98 0 Cyprinid herpesvirus 2 317878 species 290304 11 11 0 Nostoc sp. PCC 7107 317936 species 6329823 98 80 0 Shewanella denitrificans OS217 318161 leaf 4545906 32 28 0 Shewanella frigidimarina NCIMB 400 318167 leaf 4845257 22 22 0 Paracoccus denitrificans PD1222 318586 leaf 5236194 9 4 0 Shewanella putrefaciens CN-32 319224 leaf 4659220 28 2 0 Chlorobium luteolum DSM 273 319225 leaf 2364842 12 6 0 Leadbetterella 319458 genus 4059653 1 0 0 Streptococcus pyogenes MGAS6180 319701 leaf 1897573 28 0 0 Mycobacterium abscessus subsp. bolletii 319705 subspecies 14615173 10 0 0 Deinococcus geothermalis DSM 11300 319795 leaf 3247018 10 7 0 Beggiatoa leptomitiformis 319938 species 4265296 41 40 0 Clostridium virus phiCD119 320122 species 53325 1 0 0 Burkholderia pseudomallei 1710b 320372 leaf 7308054 1 1 0 Burkholderia pseudomallei 668 320373 leaf 7040403 2 0 0 Anaplasma marginale str. Florida 320483 leaf 1202435 23 11 0 Conexibacteraceae 320583 family 6359369 1 0 0 Cyclobacterium amurskyense 320787 species 6158829 120 66 0 Staphylococcus phage ROSA 320843 species 43155 2 0 0 Staphylococcus phage 88 320848 species 43231 3 2 0 Staphylococcus phage X2 320850 species 43440 9 1 0 Aeromonas virus 31 321023 species 172963 1 0 0 Synechococcus sp. JA-3-3Ab 321327 species 2932766 7 5 0 Synechococcus sp. JA-2-3B'a(2-13) 321332 species 3046682 29 28 0 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 321956 leaf 1856951 82 0 0 Lactobacillus paracasei ATCC 334 321967 leaf 2924325 2 0 0 J-virus 322067 species 18954 2 2 0 Aster yellows witches'-broom phytoplasma AYWB 322098 leaf 723970 26 18 0 Streptococcus thermophilus LMD-9 322159 leaf 1864178 3 0 0 Azotobacter vinelandii DJ 322710 leaf 5365318 15 0 0 Nitrobacter hamburgensis X14 323097 leaf 5011522 3 2 1.13E-19 Nitrobacter winogradskyi Nb-255 323098 leaf 3402093 4 3 0 Methanospirillum hungatei JF-1 323259 leaf 3544738 274 256 0 Nitrosococcus oceani ATCC 19707 323261 leaf 3522111 21 20 0 Dokdonella 323413 genus 4446619 1 0 0 Dokdonella koreensis 323415 species 4446619 5 0 0 Nitrosospira multiformis ATCC 25196 323848 leaf 3234309 6 6 0 Shewanella loihica PV-4 323850 leaf 4602594 29 23 0 Paenibacillus sp. JDR-2 324057 species 7184930 49 47 0 Chloroflexus aurantiacus J-10-fl 324602 leaf 5258541 12 0 0 Lactobacillus gasseri ATCC 33323 = JCM 1131 324831 leaf 1894360 92 90 0 Heterosigma akashiwo RNA virus 324900 species 8587 1 1 0 Pelodictyon phaeoclathratiforme BU-1 324925 leaf 3018238 24 20 0 Shewanella baltica OS155 325240 leaf 5342896 29 2 0 Coxiella endosymbiont of Amblyomma americanum 325775 species 656901 13 12 0 Shewanella amazonensis SB2B 326297 leaf 4306142 33 30 0 Sulfurimonas denitrificans DSM 1251 326298 leaf 2201561 34 33 0 Bacillus velezensis FZB42 326423 leaf 3918589 3 0 0 Frankia alni ACN14a 326424 leaf 7497934 18 15 0 Lactobacillus helveticus CNRZ32 326425 leaf 2225962 8 3 0 Chloroflexus aggregans DSM 9485 326427 leaf 4684931 9 9 0 Pseudoalteromonas haloplanktis TAC125 326442 leaf 3850272 69 19 0 Candidatus Accumulibacter phosphatis 327160 species 5306133 1 0 0 Trichoplusia ni ascovirus 2c 328615 species 174059 5 2 0 Acaryochloris marina MBIC11017 329726 leaf 8361599 42 35 0 Salmonella phage SE1 329864 species 41941 20 0 0 Vibriophage VP4 329886 species 39503 1 0 0 Nitrospira defluvii 330214 species 4317083 12 11 0 Listeria phage B025 330396 species 42653 2 0 0 Marinobacter psychrophilus 330734 species 3998597 11 4 0 Sulfolobus acidocaldarius DSM 639 330779 leaf 2225959 32 0 0 Blattabacterium sp. (Blattella germanica) str. Bge 331104 leaf 640935 33 31 0 Escherichia coli O139:H28 str. E24377A 331111 leaf 5249288 4 3 0 Escherichia coli HS 331112 leaf 4643538 1 0 0 Simkania negevensis Z 331113 leaf 2628375 25 20 0 Burkholderia cenocepacia AU 1054 331271 leaf 7279116 8 0 0 Burkholderia cenocepacia HI2424 331272 leaf 7702840 7 1 0 Yersinia phage phiR1-37 331278 species 262391 1 1 0 Chlamydophila pecorum E58 331635 leaf 1106197 57 4 0 Chlorobium phaeobacteroides BS1 331678 leaf 2736403 13 12 0 Burkholderia pseudomallei Pasteur 52237 331978 leaf 7325318 1 0 0 Trichoplusia ni single nucleopolyhedrovirus 332054 species 134394 1 1 0 Sphingobium japonicum 332056 species 4424862 6 0 0 Ferroplasma acidarmanus fer1 333146 leaf 1935211 36 34 0 Human papillomavirus type 26 333762 leaf 7855 1 1 0 Human papillomavirus type 32 333763 leaf 7961 15 8 0 Human papillomavirus type 34 333764 leaf 7723 2 2 0 Enterococcus faecium DO 333849 leaf 3052572 7 1 0 Orientia tsutsugamushi str. Ikeda 334380 leaf 2008987 70 47 0 Lactobacillus fermentum IFO 3956 334390 leaf 2098685 10 1 0 Bacillus cereus NC7401 334406 leaf 5552031 59 0 0 Finegoldia magna ATCC 29328 334413 leaf 1986740 67 61 0 Nitrosomonas eutropha C91 335283 leaf 2781824 24 24 0 Psychrobacter cryohalolentis K5 335284 leaf 3101097 11 7 0 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311 335541 leaf 2936195 14 14 0 Syntrophobacter fumaroxidans MPOB 335543 leaf 4990251 10 10 0 Bradyrhizobium sp. S23321 335659 species 7231841 5 3 0 Erythrobacteraceae 335929 family 3052398 3 0 0 Candidatus Pelagibacter ubique HTCC1062 335992 leaf 1308759 42 40 0 Rickettsia bellii RML369-C 336407 leaf 1522076 19 3 0 Alphapapillomavirus 4 337043 species 7860 1 1 0 Gordonia sp. KTR9 337191 species 5885710 3 1 0 Escherichia phage Jk06 337828 species 46072 1 1 0 African green monkey simian foamy virus 338079 species 13111 9 6 0 Vibrio campbellii ATCC BAA-1116 338187 leaf 12090206 156 56 0 Leptospira interrogans serovar Bratislava 338215 leaf 4721584 41 4 0 Pelobacter carbinolicus DSM 2380 338963 leaf 3665893 7 6 0 Pelobacter propionicus DSM 2379 338966 leaf 4241119 55 51 0 Rhodoferax ferrireducens T118 338969 leaf 4969784 29 20 1.70E-10 Burkholderia ambifaria AMMD 339670 leaf 15057145 32 2 4.11E-11 Actinobacillus succinogenes 130Z 339671 leaf 2319663 31 31 0 Methanosphaera stadtmanae DSM 3091 339860 leaf 1767403 53 52 0 Mycoplasma capricolum subsp. capricolum ATCC 27343 340047 leaf 1010023 28 13 0 Bacteriophage APSE-2 340054 species 39867 1 0 0 Thermoanaerobacter pseudethanolicus ATCC 33223 340099 leaf 2362816 46 0 0 Chlorobium chlorochromatii CaD3 340177 leaf 2572079 14 12 0 Corynebacterium glutamicum R 340322 leaf 3363299 3 1 0 Actinoalloteichus hymeniacidonis 340345 species 6306386 8 6 0 Herbaspirillum hiltneri 341045 species 4965474 2 0 0 Magnetospirillum magneticum AMB-1 342108 leaf 4967148 51 50 0 Burkholderia oklahomensis 342113 species 7135022 183 5 0 White spot syndrome virus 342409 species 309286 8 6 0 Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 342451 leaf 2577899 43 12 0 Pseudoalteromonas atlantica T6c 342610 leaf 5187005 42 42 0 Streptococcus agalactiae COH1 342616 leaf 2065074 4 0 0 Pyrococcus sp. NA2 342949 species 1861320 15 12 0 Sodalis glossinidius str. 'morsitans' 343509 leaf 4292502 6 6 0 Escherichia virus K1E 344022 species 45251 1 0 0 Shigella boydii CDC 3083-94 344609 leaf 4874659 2 0 0 Vibrio cholerae O395 345073 leaf 8267619 4 0 0 Invertebrate iridescent virus 22 345198 species 196456 5 0 0 Invertebrate iridescent virus 3 345201 species 191100 2 2 0 Bacillus coagulans 36D1 345219 leaf 3552226 52 1 0 Invertebrate iridescent virus 30 345585 species 198533 7 3 0 Geobacter pickeringii 345632 species 3618700 6 6 0 Bacillus phage Fah 345922 species 37974 11 0 0 Streptococcus salivarius JIM8777 347253 leaf 2210574 42 3 0 Rickettsia africae ESF-5 347255 leaf 1290917 3 0 0 Mycoplasma hominis ATCC 23114 347256 leaf 665445 48 4 0 Mycoplasma agalactiae PG2 347257 leaf 877438 37 34 0 Bacillus cereus F837/76 347495 leaf 5288498 21 18 0 Rhizobium etli CFN 42 347834 leaf 6530228 5 0 0 Bacillus phage Gamma 347962 species 37253 11 0 0 Natronomonas pharaonis DSM 2160 348780 leaf 2749696 3 3 0 Maize Iranian mosaic virus 348823 species 12381 1 1 0 Rhodobacter sphaeroides ATCC 17029 349101 leaf 4489380 10 3 0 Rhodobacter sphaeroides ATCC 17025 349102 leaf 4557127 9 6 0 Psychrobacter sp. PRwf-1 349106 species 2995049 21 20 0 Halorhodospira halophila SL1 349124 leaf 2678452 3 3 0 Desulfotomaculum reducens MI-1 349161 leaf 3608104 61 54 0 Acidiphilium cryptum JF-5 349163 leaf 3963080 1 0 0 Micavibrio aeruginosavorus EPB 349215 leaf 2458610 17 16 0 Leuconostoc citreum KM20 349519 leaf 1896614 5 5 0 Paenibacillus polymyxa E681 349520 leaf 5394883 28 21 0 Hahella chejuensis KCTC 2396 349521 leaf 7215267 31 24 0 Akkermansia muciniphila ATCC BAA-835 349741 leaf 2664102 11 3 0 Yersinia pestis Angola 349746 leaf 9361624 1 0 0 Yersinia pseudotuberculosis IP 31758 349747 leaf 4935125 6 5 0 Mycobacterium gilvum PYR-GCK 350054 leaf 5982829 20 3 0 Mycobacterium vanbaalenii PYR-1 350058 leaf 6491865 7 6 0 Alkaliphilus oremlandii OhILAs 350688 leaf 3123558 91 76 0 Burkholderia dolosa AU0158 350701 leaf 6409095 191 1 1.39E-09 Methanocella arvoryzae MRE50 351160 leaf 3179916 12 12 0 Marinobacter hydrocarbonoclasticus VT8 351348 leaf 4779762 26 17 0 Asian prunus virus 1 351427 species 9409 1 1 0 Francisella tularensis subsp. holarctica FSC200 351581 leaf 1894157 1 1 0 Geobacter uraniireducens Rf4 351605 leaf 5136364 18 13 0 Acidothermus cellulolyticus 11B 351607 leaf 2443540 1 1 0 Caldicellulosiruptor saccharolyticus DSM 8903 351627 leaf 2970275 50 43 0 Xenorhabdus doucetiae 351671 species 4203651 18 17 0 Xenorhabdus hominickii 351679 species 4522699 37 34 0 Shewanella sp. W3-18-1 351745 species 4708380 19 7 0 Pseudomonas putida F1 351746 leaf 5959964 4 1 0 Lactobacillus delbrueckii subsp. bulgaricus 2038 353496 leaf 1872918 90 7 0 Campylobacter jejuni subsp. jejuni 81-176 354242 leaf 1699052 2 0 0 Lactococcus phage P335 sensu lato 354260 species 36596 1 0 0 Leptospira borgpetersenii serovar Hardjo-bovis str. L550 355276 leaf 3931782 41 8 0 Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 355277 leaf 3876235 37 1 0 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 355278 leaf 3956089 60 0 0 Hepatitis C virus genotype 3 356114 leaf 9456 1 0 0 Peruvian horse sickness virus 356862 species 19748 1 1 0 Orientia tsutsugamushi str. Boryong 357244 leaf 2127051 56 26 0 Helicobacter pylori HPAG1 357544 leaf 1605736 8 5 0 Psychromonas ingrahamii 37 357804 leaf 4559598 55 45 0 Roseiflexus sp. RS-1 357808 species 5801598 9 8 0 Lachnoclostridium phytofermentans ISDg 357809 leaf 4847594 110 100 0 Lutibacter 358023 genus 0 1 0 0 Acidovorax sp. KKS102 358220 species 5196935 38 9 2.31E-09 Brevibacillus brevis NBRC 100599 358681 leaf 6296436 42 40 0 Methylotenera 359407 genus 2803720 6 0 0 Methylotenera mobilis 359408 species 2547570 1 0 0 Homalodisca coagulata virus-1 359812 species 9345 1 1 0 Spodoptera litura granulovirus 359919 species 124121 11 11 0 Bacillus virus Wbeta 359961 species 40867 12 0 0 Rhizosolenia setigera RNA virus 01 359987 species 8877 4 4 0 Xanthomonas oryzae pv. oryzae PXO99A 360094 leaf 5238555 1 0 0 Bartonella bacilliformis KC583 360095 leaf 1445021 39 0 0 Yersinia pestis Antiqua 360102 leaf 9764232 1 0 0 Campylobacter concisus 13826 360104 leaf 2099413 24 21 0 Campylobacter curvus 525.92 360105 leaf 1971270 8 8 0 Campylobacter fetus subsp. fetus 82-40 360106 leaf 1773615 2 0 0 Campylobacter hominis ATCC BAA-381 360107 leaf 1714951 35 29 0 Campylobacter jejuni subsp. doylei 269.97 360109 leaf 1845106 99 86 0 Coxiella burnetii RSA 331 360115 leaf 2053744 17 3 0 Burkholderia pseudomallei 406e 360118 leaf 7271506 2 0 0 Bordetella avium 197N 360910 leaf 3732255 2 2 0 Exiguobacterium sp. AT1b 360911 species 2999895 8 6 0 Bacillus cereus Q1 361100 leaf 5506207 60 19 0 Altererythrobacter 361177 genus 0 17 0 0 Altererythrobacter epoxidivorans 361183 species 2786256 3 1 0 Streptomyces vietnamensis 362257 species 9153777 30 25 0 Escherichia coli 536 362663 leaf 4938920 21 0 0 Spiroplasma cantharicola 362837 species 1179577 73 65 0 Lactobacillus salivarius UCC118 362948 leaf 2133977 31 3 0 Haloquadratum walsbyi DSM 16790 362976 leaf 3179361 33 10 0 Lawsonia intracellularis PHE/MN1-00 363253 leaf 1719014 31 0 0 Verminephrobacter eiseniae 364317 species 5597943 1 0 0 Granulibacter bethesdensis 364410 species 2717856 1 0 0 Choristoneura occidentalis granulovirus 364745 species 104710 8 2 0 Polaromonas naphthalenivorans CJ2 365044 leaf 5366143 20 18 0 Ramlibacter tataouinensis TTB310 365046 leaf 4070193 28 19 6.44E-10 Pelosinus 365348 genus 5380816 2 0 0 Tomato yellow spot virus 365523 species 5300 1 1 0 Streptococcus mitis B6 365659 leaf 2146611 59 4 7.55E-17 Sinorhizobium medicae WSM419 366394 leaf 6817576 354 36 0 Sulfurospirillum cavolei 366522 species 2698323 10 10 0 Caulobacter sp. K31 366602 species 5889399 49 21 0 Xanthomonas fuscans subsp. fuscans 366649 subspecies 5088683 9 6 0 Yersinia similis 367190 species 4964409 23 15 0 Microbacterium sp. XT11 367477 species 3475315 14 2 4.06E-10 Arcobacter butzleri RM4018 367737 leaf 2341251 70 14 0 Cupriavidus sp. USMAA1020 367825 species 7949449 44 2 0 Bifidobacterium adolescentis ATCC 15703 367928 leaf 2089645 3 0 0 Methanoculleus marisnigri JR1 368407 leaf 2478101 12 6 0 Thermofilum pendens Hrk 5 368408 leaf 1813393 2 2 0 Salinispora tropica CNB-440 369723 leaf 5183331 5 5 0 Gallionella capsiferriformans 370405 species 3162471 1 0 0 Pelotomaculum thermopropionicum SI 370438 leaf 3025375 22 16 0 Streptococcus pyogenes MGAS10270 370552 leaf 1928252 3 1 0 Streptococcus pyogenes MGAS10750 370554 leaf 1937111 5 1 0 Streptococcus phage M102 372457 species 31147 1 0 0 Buchnera aphidicola BCc 372461 leaf 422434 11 10 0 Isoptericola dokdonensis 372663 species 3826972 3 0 0 Streptococcus pneumoniae D39 373153 leaf 2046115 7 0 0 Shigella flexneri 5 str. 8401 373384 leaf 4574284 2 0 0 Halothermothrix orenii H 168 373903 leaf 2578146 52 49 0 Rivularia sp. PCC 7116 373994 species 8728773 111 101 0 Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 374463 leaf 686194 24 23 0 Enterobacteria phage 933W sensu lato 374810 species 61042 5 0 0 Candidatus Korarchaeum cryptofilum OPF8 374847 leaf 1590757 8 8 0 Shigella flexneri 1a 374923 leaf 4853344 4 1 0 Haemophilus influenzae PittEE 374930 leaf 1813033 9 2 0 Synechococcus sp. PCC 7003 374981 species 3345085 63 62 0 Synechococcus sp. PCC 73109 374982 species 3298676 12 7 0 Lactobacillus backii 375175 species 14123253 671 16 0 Janthinobacterium sp. Marseille 375286 species 4110251 12 7 1.39E-10 Roseobacter denitrificans OCh 114 375451 leaf 4331234 5 4 0 Natranaerobius thermophilus 375929 species 3191453 2 0 0 Halotalea alkalilenta 376489 species 4387428 10 5 0 Flavobacterium johnsoniae UW101 376686 leaf 6096872 108 97 7.96E-19 Lumpy skin disease virus NI-2490 376849 leaf 150773 2 0 0 Goatpox virus Pellor 376852 leaf 149599 6 2 0 Malvastrum yellow mosaic virus 377462 species 2728 5 5 0 Thermobacillus composti 377615 species 4355525 2 0 0 Yersinia pestis Nepal516 377628 leaf 4646286 1 0 0 Teredinibacter turnerae T7901 377629 leaf 5193164 19 16 0 Kocuria rhizophila DC2201 378753 leaf 2697540 7 5 0 Stigmatella aurantiaca DW4/3-1 378806 leaf 10260756 48 36 0 Gemmatimonas aurantiaca T-27 379066 leaf 4636964 18 17 0 Glossina pallidipes salivary gland hypertrophy virus 379529 leaf 190032 4 4 0 Pseudomonas stutzeri A1501 379731 leaf 4567418 38 3 0 Pseudomonas protegens 380021 species 6923588 2 0 0 Xanthomonas albilineans GPE PC73 380358 leaf 3852299 5 3 0 Acidithiobacillus ferrooxidans ATCC 53993 380394 leaf 2885038 11 0 0 Paramecium bursaria Chlorella virus AR158 380598 species 344691 1 0 0 Aeromonas hydrophila subsp. hydrophila ATCC 7966 380703 leaf 4744448 11 5 0 Hydrogenobaculum sp. Y04AAS1 380749 species 1559514 68 29 0 Ralstonia eutropha H16 381666 leaf 7416678 73 5 0 Pseudomonas aeruginosa PA7 381754 leaf 6588339 18 18 0 Fervidobacterium nodosum Rt17-B1 381764 leaf 1948941 61 58 0 Aeromonas salmonicida subsp. salmonicida A449 382245 leaf 5040536 34 29 0 Synechococcus phage syn9 382359 species 177300 3 3 0 Helicobacter acinonychis str. Sheeba 382638 leaf 1557588 15 10 0 Bartonella tribocorum CIP 105476 382640 leaf 2642404 38 0 0 Roseiflexus castenholzii DSM 13941 383372 leaf 5723298 22 19 0 Xanthomonas oryzae pv. oryzicola BLS256 383407 leaf 4831746 4 0 0 Phaeobacter inhibens 2.10 383629 leaf 4160918 3 0 0 Pyrobaculum islandicum DSM 4184 384616 leaf 1826402 6 6 0 Pseudomonas entomophila L48 384676 leaf 5888780 12 5 0 Cycloclasticus sp. P1 385025 species 2363215 23 13 0 Listeria welshimeri serovar 6b str. SLCC5334 386043 leaf 2814130 23 17 0 Clostridium novyi NT 386415 leaf 2547720 74 65 0 Nitratiruptor sp. SB155-2 387092 species 1877931 43 37 0 Sulfurovum sp. NBC37-1 387093 species 2562277 29 21 0 Lactobacillus brevis ATCC 367 387344 leaf 2340228 13 4 0 Archaeoglobus sulfaticallidus PM70-1 387631 leaf 2076931 24 22 0 Staphylococcus phage phiNM 387905 species 43128 2 0 0 Lactococcus phage KSY1 388452 species 79232 4 4 0 Streptococcus sanguinis SK36 388919 leaf 2388435 10 9 0 Pontibacter akesuensis 388950 species 4829559 46 44 0 Ranid herpesvirus 2 389214 species 231801 1 1 0 Protochlamydia naegleriophila 389348 species 3030375 37 30 0 Pseudomonas putida W619 390235 leaf 5774330 7 2 0 Borrelia afzelii PKo 390236 leaf 1404288 32 3 0 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 = JCM 1002 390333 leaf 1864998 16 0 0 Aedes flavivirus 390845 species 11064 2 2 0 Thermotoga petrophila RKU-1 390874 leaf 1823511 11 5 0 Stenotrophomonas maltophilia R551-3 391008 leaf 4573969 65 59 0 Thermosipho melanesiensis BI429 391009 leaf 1915238 29 29 0 Ehrlichia sp. HF 391036 species 1148904 26 16 0 Salinispora arenicola CNS-205 391037 leaf 5786361 10 6 0 Paraburkholderia phymatum STM815 391038 leaf 8676562 21 2 0 Granulibacter bethesdensis CGDNIH1 391165 leaf 2708355 13 0 0 Roseobacter litoralis Och 149 391595 leaf 4745450 18 18 0 Octadecabacter arcticus 238 391616 leaf 5478249 43 41 0 Phaeobacter inhibens DSM 17395 391619 leaf 4227134 15 12 0 Thermococcus barophilus MP 391623 leaf 2064237 34 18 0 Octadecabacter antarcticus 307 391626 leaf 4875481 30 28 0 Verminephrobacter eiseniae EF01-2 391735 leaf 5597943 21 20 0 Desulfovibrio vulgaris DP4 391774 leaf 3661391 9 3 0 Rickettsia bellii OSU 85-389 391896 leaf 1528980 64 13 0 Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088 391904 leaf 5661706 6 0 0 Alcanivorax pacificus W11-5 391936 leaf 4168427 76 73 0 Sphingomonas wittichii RW1 392499 leaf 5915246 61 15 7.27E-10 Shewanella woodyi ATCC 51908 392500 leaf 5935403 30 29 0 Desulfurispirillum 393029 genus 2928377 1 0 0 Listeria monocytogenes FSL R2-561 393126 leaf 2973801 5 1 0 Listeria monocytogenes J0161 393130 leaf 3000464 5 0 0 Yersinia enterocolitica subsp. enterocolitica 8081 393305 leaf 4683620 34 3 0 Alcanivorax borkumensis SK2 393595 leaf 3120143 15 1 0 Maricaulis maris MCS10 394221 leaf 3368780 7 6 0 Koala retrovirus 394239 species 8566 16 15 0 [Clostridium] cellulolyticum H10 394503 leaf 4068724 304 301 0 Clostridium taeniosporum 394958 species 3503541 151 128 0 Burkholderia multivorans ATCC 17616 395019 leaf 14017432 13 1 0 Rhizobium leguminosarum bv. trifolii WSM1325 395491 leaf 7418122 6 4 0 Rhizobium leguminosarum bv. trifolii WSM2304 395492 leaf 6872702 15 14 0 Gallionella capsiferriformans ES-2 395494 leaf 3162471 9 9 0 Leptothrix cholodnii SP-6 395495 leaf 4909403 25 18 9.79E-11 Rhodopseudomonas palustris TIE-1 395960 leaf 5744041 3 0 9.92E-17 Cyanothece sp. PCC 7425 395961 species 5786110 79 73 0 Cyanothece sp. PCC 8802 395962 species 4803347 63 17 0 Beijerinckia indica subsp. indica ATCC 9039 395963 leaf 4418616 12 12 0 Methylocella silvestris BL2 395965 leaf 4305430 7 6 0 Clostridium phage phiSM101 396359 species 38092 1 1 0 Staphylococcus carnosus subsp. carnosus TM300 396513 leaf 2566424 69 34 0 Thioalkalivibrio sulfidiphilus HL-EbGr7 396588 leaf 3464554 19 16 0 Thioalkalivibrio sp. K90mix 396595 species 2985056 11 10 0 Sphingomonas sanxanigenens 397260 species 6580298 1 0 0 Acidovorax citrulli AAC00-1 397945 leaf 5352772 124 79 5.68E-12 Caldivirga maquilingensis IC-167 397948 leaf 2077567 19 19 0 Bacillus pseudofirmus OF4 398511 leaf 4249248 27 24 0 Paraburkholderia phytofirmans PsJN 398527 leaf 8214658 30 9 0 Burkholderia ambifaria MC40-6 398577 leaf 7642536 13 2 0 Delftia acidovorans SPH-1 398578 leaf 6767514 34 7 1.26E-15 Shewanella pealeana ATCC 700345 398579 leaf 5174581 28 23 0 Dinoroseobacter shibae DFL 12 = DSM 16493 398580 leaf 4417868 5 5 0 Geobacter lovleyi SZ 398767 leaf 3994874 119 95 0 Staphylothermus marinus F1 399550 leaf 1570485 31 23 0 Shewanella baltica OS195 399599 leaf 5547544 417 1 0 Thermoanaerobacter sp. X514 399726 species 2457259 37 4 0 Pseudomonas mendocina ymp 399739 leaf 5072807 663 19 0 Serratia proteamaculans 568 399741 leaf 5495657 110 98 8.50E-11 Enterobacter sp. 638 399742 species 4676461 22 20 0 Paramecium bursaria Chlorella virus FR483 399781 leaf 321240 1 1 0 Shewanella putrefaciens 200 399804 leaf 4840251 44 16 0 Pontibacter korlensis 400092 species 5462537 64 56 0 Marinomonas sp. MWYL1 400668 species 5100344 26 23 0 Legionella pneumophila str. Corby 400673 leaf 3576470 4 0 0 Terriglobus saanensis SP1PR4 401053 leaf 5095226 14 8 0 Corynebacterium ureicelerivorans 401472 species 2328278 2 1 0 Bifidobacterium dentium Bd1 401473 leaf 2636367 43 0 0 Francisella tularensis subsp. novicida U112 401614 leaf 3820623 9 2 0 Candidatus Riesia pediculicola 401619 species 582127 1 0 0 Flavobacterium psychrophilum JIP02/86 402612 leaf 2860382 37 7 0 Ralstonia pickettii 12J 402626 leaf 5325729 21 9 1.21E-10 Methanococcus maripaludis C5 402880 leaf 1789046 29 19 0 Parvibaculum lavamentivorans DS-1 402881 leaf 3914745 2 2 0 Shewanella baltica OS185 402882 leaf 5312910 28 12 0 Petrotoga mobilis SJ95 403833 leaf 2169548 32 30 0 Streptococcus phage P9 403905 species 40539 6 0 0 Virgibacillus sp. SK37 403957 species 3841730 65 54 0 Blackberry yellow vein-associated virus 404196 species 15716 1 1 0 Geobacter bemidjiensis Bem 404380 leaf 4615150 86 80 0 Coleus vein necrosis virus 404404 species 8727 8 7 0 Anaeromyxobacter sp. Fw109-5 404589 species 5277990 70 69 0 Acinetobacter baumannii ACICU 405416 leaf 3996761 1 0 0 Xylella fastidiosa M12 405440 leaf 2475130 7 5 0 Xylella fastidiosa M23 405441 leaf 2573987 4 0 0 Bacillus cereus G9842 405531 leaf 5736823 42 6 0 Bacillus cereus B4264 405532 leaf 5419036 27 6 0 Bacillus cereus AH187 405534 leaf 5599857 64 5 0 Bacillus cereus AH820 405535 leaf 5588834 53 21 8.50E-11 Lactobacillus helveticus DPC 4571 405566 leaf 2080931 10 4 0 Saccharopolyspora erythraea NRRL 2338 405948 leaf 8212805 24 22 0 Escherichia coli APEC O1 405955 leaf 5497653 6 0 0 Methanococcus vannielii SB 406327 leaf 1720048 57 55 0 Burkholderia cenocepacia MC0-3 406425 leaf 7971389 9 4 0 Natrinema sp. J7-2 406552 species 3793615 1 0 0 Xenorhabdus bovienii SS-2004 406818 leaf 4225498 58 15 0 Chlamydophila pneumoniae LPCoLN 406984 leaf 1248550 18 18 0 Sphingobium sp. MI1205 407020 species 4619375 36 5 0 Salinicoccus halodurans 407035 species 2778379 143 141 0 Campylobacter jejuni subsp. jejuni 81116 407148 leaf 1628115 3 1 0 Thermus phage phiYS40 407392 species 152372 2 0 0 Shewanella baltica OS223 407976 leaf 5358884 31 7 0 Streptomyces xiamenensis 408015 species 5961401 27 24 0 Escherichia coli SE11 409438 leaf 5155626 1 0 0 Hardenbergia mosaic virus 409486 species 9682 1 1 0 Methanocorpusculum labreanum Z 410358 leaf 1804962 4 4 0 Gramella forsetii 411153 species 3798465 1 0 0 Gramella forsetii KT0803 411154 leaf 3798465 104 97 0 Borrelia afzelii K78 411555 leaf 1309078 35 5 0 Homalodisca vitripennis reovirus 411854 species 25724 1 0 0 Burkholderia mallei NCTC 10229 412022 leaf 5742303 2 0 0 Borrelia recurrentis A1 412418 leaf 1242163 33 1 0 Borrelia duttonii Ly 412419 leaf 1574881 54 8 0 Vibrio cholerae 2740-80 412614 leaf 4088961 1 0 0 Microterricola viridarii 412690 species 3689726 8 6 0 Bacillus thuringiensis str. Al Hakam 412694 leaf 10989993 195 100 0 Paraburkholderia rhizoxinica 412963 species 3750138 5 0 0 Candidatus Vesicomyosocius okutanii HA 412965 leaf 1022154 13 13 0 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 413404 leaf 1160782 16 16 0 Cronobacter 413496 genus 4479995 3 0 0 Cronobacter dublinensis 413497 species 4628405 1 0 0 Cronobacter malonaticus 413503 species 4473761 10 0 0 [Polyangium] brachysporum 413882 species 6476147 32 19 0 Escherichia coli B str. REL606 413997 leaf 4629812 1 0 0 Clostridium botulinum A str. ATCC 3502 413999 leaf 3903260 12 0 0 Rhodospirillum centenum SW 414684 leaf 4355543 28 25 0 Planococcus donghaensis 414778 species 3319331 34 31 0 Catenulispora 414878 genus 10467782 1 0 0 Opitutae 414999 class 4854188 2 0 0 Hyperthermus butylicus DSM 5456 415426 leaf 1667163 6 6 0 Actinobacillus pleuropneumoniae serovar 5b str. L20 416269 leaf 2274482 7 0 0 Rickettsia massiliae MTU5 416276 leaf 1376184 6 3 0 Burkholderia sp. KJ006 416344 species 6629912 12 4 0 Halorubrum lacusprofundi ATCC 49239 416348 leaf 3692576 6 5 0 Pseudothermotoga lettingae TMO 416591 leaf 2135342 16 2 0 Lactococcus lactis subsp. cremoris MG1363 416870 leaf 2529478 121 0 0 Francisella tularensis subsp. tularensis WY96-3418 418136 leaf 1898476 1 0 0 Erwinia amylovora phage Era103 418443 species 45445 1 0 0 Azoarcus olearius 418699 species 4451751 3 0 0 Glypta fumiferanae ichnovirus 419435 species 291597 1 1 0 Ochrobactrum pseudogrignonense 419475 species 4992805 16 16 0 Methylobacterium extorquens PA1 419610 leaf 5471154 21 8 1.52E-09 Methanococcus aeolicus Nankai-3 419665 leaf 1569500 37 35 0 Melaka orthoreovirus 419697 leaf 23410 1 1 0 Sulfolobus islandicus Y.N.15.51 419942 leaf 2854410 47 30 0 Geobacillus thermodenitrificans NG80-2 420246 leaf 3608012 19 15 0 Methanobrevibacter smithii ATCC 35061 420247 leaf 1853160 49 43 0 Methylibium petroleiphilum PM1 420662 leaf 4643639 13 8 0 Lactococcus garvieae ATCC 49156 420889 leaf 1950135 110 2 0 Lactococcus garvieae Lg2 420890 leaf 1963964 113 5 0 Streptococcus suis GZ1 423211 leaf 2038034 5 0 0 Legionella pneumophila 2300/99 Alcoy 423212 leaf 3516334 8 0 0 KI polyomavirus 423445 species 5040 3 3 0 Rhizobium sp. IRBG74 424182 species 5464982 6 3 0 Salmonella phage SETP13 424949 species 42665 3 0 0 Shewanella sediminis HAW-EB3 425104 leaf 5517674 40 40 0 Methylobacterium sp. 4-46 426117 species 7737025 16 10 6.75E-11 Sulfolobus islandicus M.16.4 426118 leaf 2586647 15 11 0 Methylobacterium radiotolerans JCM 2831 426355 leaf 6899110 58 7 6.74E-10 Methanococcus maripaludis C7 426368 leaf 1772694 44 39 0 Leuconostoc mesenteroides KFRI-MG 427140 leaf 1896413 19 0 0 Sulfolobus islandicus M.14.25 427317 leaf 2608832 9 2 0 Sulfolobus islandicus M.16.27 427318 leaf 2692402 9 7 0 Desulfurivibrio alkaliphilus 427923 species 3097763 2 0 0 Ralstonia pickettii 12D 428406 leaf 5685358 18 7 0 Ammonifex degensii KC4 429009 leaf 2157067 3 2 0 Sulfolobus islandicus L.S.2.15 429572 leaf 2736272 8 0 0 Pedobacter steynii 430522 species 6581659 51 49 0 Halorhabdus tiamatea 430914 species 3146160 1 0 0 Clostridium kluyveri DSM 555 431943 leaf 4023800 94 0 0 Porphyromonas gingivalis ATCC 33277 431947 leaf 2354886 4 0 0 Neorickettsia risticii str. Illinois 434131 leaf 879977 4 2 0 Actinobacillus pleuropneumoniae serovar 3 str. JL03 434271 leaf 2242062 6 0 0 Coxiella burnetii Dugway 5J108-111 434922 leaf 2212937 21 0 0 Coxiella burnetii CbuG_Q212 434923 leaf 2008870 15 1 0 Coxiella burnetii CbuK_Q154 434924 leaf 2102380 14 2 0 Bacteroides vulgatus ATCC 8482 435590 leaf 5163189 74 36 0 Parabacteroides distasonis ATCC 8503 435591 leaf 4811379 128 112 0 Lysobacter capsici 435897 species 6391889 32 7 0 Mycoplasma mycoides subsp. capri str. GM12 436113 leaf 2173788 58 0 0 Sulfurihydrogenibium sp. YO3AOP1 436114 species 1838442 62 61 0 Acinetobacter oleivorans DR1 436717 leaf 4152543 61 37 0 Synechococcus phage Syn5 438482 species 46214 1 1 0 Azorhizobium caulinodans ORS 571 438753 leaf 5369772 10 7 0 Escherichia coli RS218 439184 leaf 5201869 1 0 0 Desulfatibacillum alkenivorans AK-01 439235 leaf 6517073 33 30 0 [Bacillus] selenitireducens MLS10 439292 leaf 3592487 20 19 0 Ochrobactrum anthropi ATCC 49188 439375 leaf 5205777 3 2 0 Sulfolobus islandicus Y.G.57.14 439386 leaf 2702058 14 5 0 Aciduliprofundum boonei T469 439481 leaf 1486778 39 39 0 Escherichia coli SMS-3-5 439855 leaf 5215377 8 3 0 Methylobacterium extorquens CM4 440085 leaf 6180732 35 21 0 Burkholderia pseudomallei 7894 441156 leaf 7381912 1 0 0 Burkholderia oklahomensis C6786 441162 leaf 7135022 117 95 4.36E-09 Methylobacterium populi BJ001 441620 leaf 5848997 31 9 2.61E-14 Acholeplasma laidlawii PG-8A 441768 leaf 1496992 45 38 0 Clostridium botulinum A str. ATCC 19397 441770 leaf 3863450 141 0 0 Clostridium botulinum A str. Hall 441771 leaf 3760560 141 0 0 Clostridium botulinum F str. Langeland 441772 leaf 4012918 19 0 0 Francisella tularensis subsp. mediasiatica FSC147 441952 leaf 1893886 13 0 0 Enterococcus phage phiEF24C 442493 species 142072 1 1 0 Geobacter sp. M18 443143 species 5277406 21 15 0 Geobacter sp. M21 443144 species 4745806 27 22 0 Hoyosella subflava DQS3-9A1 443218 leaf 4863490 5 5 0 Marinitoga piezophila KA3 443254 leaf 2244793 873 869 0 Clavibacter michiganensis subsp. michiganensis NCPPB 382 443906 leaf 3395237 7 5 1.33E-16 Streptomyces sp. CNQ-509 444103 species 8039333 45 28 0 Methanococcus maripaludis C6 444158 leaf 1744193 55 32 0 Synechococcus phage S-SM1 444859 species 174079 3 3 0 Synechococcus phage S-SM2 444860 species 190789 3 3 0 Prochlorococcus phage P-RSM4 444862 species 176428 1 1 0 Prochlorococcus phage Syn33 444878 species 174285 2 1 0 Pseudonocardia sp. AL041005-10 445576 species 6143341 19 16 0 Synechococcus phage S-ShM2 445683 species 179563 1 1 0 Synechococcus phage Syn19 445684 species 175230 1 1 0 Synechococcus phage S-SSM5 445685 species 176184 2 2 0 Synechococcus phage S-SSM7 445686 species 232878 8 8 0 Cyanophage NATL2A-133 445692 species 47536 2 2 0 Prochlorococcus phage P-HM1 445700 species 181044 4 1 0 Pandoraea thiooxydans 445709 species 4464186 22 19 0 Dyella thiooxydans 445710 species 4227172 12 7 0 Elusimicrobium minutum Pei191 445932 leaf 1643562 19 19 0 Borrelia burgdorferi ZS7 445985 leaf 1345494 62 2 0 Actinosynnema mirum DSM 43827 446462 leaf 8248144 25 23 0 Brachybacterium faecium DSM 4810 446465 leaf 3614992 16 16 0 Cellulomonas flavigena DSM 20109 446466 leaf 4123179 12 9 0 Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 446468 leaf 6543312 20 0 0 Sanguibacter keddieii DSM 10542 446469 leaf 4253413 16 13 0 Stackebrandtia nassauensis DSM 44728 446470 leaf 6841557 41 30 0 Xylanimonas cellulosilytica DSM 15894 446471 leaf 3831380 1 1 0 Acetobacter senegalensis 446692 species 3969909 11 11 0 Kocuria flava 446860 species 3638342 20 14 0 Anaeromyxobacter sp. K 447217 species 5061632 20 7 0 Simiduia 447467 genus 4300227 1 0 0 Sorangium cellulosum So ce56 448385 leaf 13033779 32 25 0 Microcystis aeruginosa NIES-843 449447 leaf 5842795 48 26 0 Phenylobacterium zucineum HLK1 450851 leaf 4379231 13 12 0 Staphylococcus aureus subsp. aureus USA300_FPR3757 451515 leaf 2917469 1 0 0 Staphylococcus aureus subsp. aureus USA300_TCH1516 451516 leaf 2903081 1 0 0 Bacillus cereus 03BB108 451709 leaf 6068729 123 110 0 Candidatus Amoebophilus asiaticus 5a2 452471 leaf 1884364 37 30 0 Opitutus terrae PB90-1 452637 leaf 5957605 5 5 0 Polynucleobacter necessarius subsp. necessarius STIR1 452638 leaf 1560469 40 27 2.82E-14 Kitasatospora setae KM-6054 452652 leaf 8783278 34 28 2.01E-18 Sphingobium japonicum UT26S 452662 leaf 4424862 23 10 0 Pseudarthrobacter chlorophenolicus A6 452863 leaf 4980870 3 3 0 Desulfarculaceae 453228 family 3655731 1 0 0 Agromyces sp. AR33 453304 species 4373124 7 2 0 Ignicoccus hospitalis KIN4/I 453591 leaf 1297538 5 4 0 Salmonella enterica subsp. enterica serovar Agona str. SL483 454166 leaf 4836638 28 0 0 Chrysochromulina ericina virus 455364 species 473558 12 10 0 Anaeromyxobacter dehalogenans 2CP-1 455488 leaf 5029329 16 4 0 Streptomyces griseus subsp. griseus NBRC 13350 455632 leaf 8545929 13 12 0 Thermus parvatiensis 456163 species 2016098 10 5 0 Methanococcus voltae A3 456320 leaf 1936387 41 32 0 Xanthomonas euvesicatoria 456327 species 10838435 1 0 0 Methanoregula boonei 6A8 456442 leaf 2542943 20 17 0 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 456481 leaf 3951448 60 0 0 Fusobacterium nucleatum subsp. animalis 7_1 457405 leaf 2514029 96 35 0 Streptomyces albus J1074 457425 leaf 6841649 12 0 0 Streptomyces lividans TK24 457428 leaf 8345283 23 16 0 Natranaerobius thermophilus JW/NM-WN-LF 457570 leaf 3191453 66 59 0 Chloracidobacterium 458032 genus 3695372 1 0 0 Macrococcus caseolyticus JCSC5402 458233 leaf 2219737 38 37 0 Shewanella halifaxensis HAW-EB4 458817 leaf 5226917 50 45 0 Candidatus Cloacimonas acidaminovorans str. Evry 459349 leaf 2246820 59 20 0 Mycobacterium liflandii 128FXT 459424 leaf 6399543 26 3 0 Methylobacterium nodulans ORS 2060 460265 leaf 8839022 14 12 0 Ursus maritimus papillomavirus 1 461322 leaf 7582 1 1 0 Bordetella flabilis 463014 species 5954318 5 3 0 Bordetella bronchialis 463025 species 11845675 15 2 0 Micrococcus luteus NCTC 2665 465515 leaf 2501097 11 8 0 Streptomyces sp. Mg1 465541 species 8716193 46 45 0 Steroidobacter denitrificans 465721 species 3467246 18 15 0 Erwinia tasmaniensis Et1/99 465817 leaf 4067864 16 12 0 Streptococcus gordonii str. Challis substr. CH1 467705 leaf 2196662 28 11 0 Thermobispora bispora DSM 43833 469371 leaf 4189976 16 15 0 Cryptobacterium curtum DSM 15641 469378 leaf 1617804 3 2 0 Halogeometricum borinquense DSM 11551 469382 leaf 3944467 7 5 0 Conexibacter woesei DSM 14684 469383 leaf 6359369 18 17 0 Fusobacterium nucleatum subsp. vincentii 3_1_27 469602 leaf 2190228 73 35 0 Fusobacterium nucleatum subsp. vincentii 3_1_36A2 469604 leaf 2268272 56 20 0 Fusobacterium nucleatum subsp. animalis 4_8 469607 leaf 2275461 74 14 0 Geobacillus sp. WCH70 471223 species 3508804 27 24 0 uncultured Termite group 1 bacterium phylotype Rs-D17 471821 leaf 1148570 24 20 0 Thermomonospora curvata DSM 43183 471852 leaf 5639016 12 11 0 Beutenbergia cavernae DSM 12333 471853 leaf 4669183 6 6 0 Dyadobacter fermentans DSM 18053 471854 leaf 6967790 26 23 0 Slackia heliotrinireducens DSM 20476 471855 leaf 3165038 6 6 0 Jonesia denitrificans DSM 20603 471856 leaf 2749646 10 9 0 Saccharomonospora viridis DSM 43017 471857 leaf 4308349 6 3 0 Devriesea 472568 genus 0 1 0 0 Devriesea agamarum 472569 species 2958880 2 1 0 Nitrosococcus halophilus Nc 4 472759 leaf 4145260 12 11 0 Xanthomonas citri pv. malvacearum 473422 leaf 5123943 9 8 0 Enterococcus faecalis OG1RF 474186 leaf 2739625 14 4 0 Lactococcus phage 1706 475178 species 55597 1 1 0 Francisella sp. MA067296 475375 species 1827930 18 13 0 Altererythrobacter ishigakiensis 476157 species 2673978 134 53 0 Candidatus Ishikawaella capsulata Mpkobe 476281 leaf 754729 16 14 0 Streptomyces cyaneogriseus subsp. noncyanogenus 477245 subspecies 7762396 32 23 0 Modestobacter marinus 477641 species 5575517 22 20 3.35E-10 Candidatus Desulforudis audaxviator MP104C 477974 leaf 2349476 8 3 0 Halobacterium salinarum R1 478009 leaf 2668776 2 1 0 Campylobacter jejuni subsp. jejuni CG8421 478547 leaf 1636029 6 0 0 Kytococcus sedentarius DSM 20547 478801 leaf 2785024 23 20 0 Nakamurella multipartita DSM 44233 479431 leaf 6060298 10 8 0 Streptosporangium roseum DSM 43021 479432 leaf 10369518 39 37 0 Catenulispora acidiphila DSM 44928 479433 leaf 10467782 19 15 0 Kribbella flavida DSM 17836 479435 leaf 7579488 4 3 0 Veillonella parvula DSM 2008 479436 leaf 2132142 21 17 0 Eggerthella lenta DSM 2243 479437 leaf 3632260 2 2 0 Acinetobacter baumannii AB0057 480119 leaf 4059242 21 4 0 Chloroflexus sp. Y-400-fl 480224 species 5268950 12 0 0 Myroides profundi 480520 species 4064534 119 68 0 Rickettsia philipii str. 364D 481009 leaf 1287740 6 2 0 Acetobacter pasteurianus subsp. ascendens 481146 subspecies 2999217 83 55 0 Methylacidiphilum infernorum V4 481448 leaf 2287145 27 20 0 Paenibacillus sp. Y412MC10 481743 species 7121665 59 58 0 Ralstonia phage RSL1 482058 species 231255 8 6 0 Oscillatoria nigro-viridis 482564 species 8272254 2 0 0 Burkholderia lata 482957 species 17031116 18 8 7.43E-18 Myxococcus fulvus HW-1 483219 leaf 9003593 12 12 0 Geoalkalibacter subterraneus 483547 species 3717645 24 23 0 Bacillus subtilis subsp. inaquosorum 483913 subspecies 4143890 30 24 0 Thermosipho africanus TCF52B 484019 leaf 2016657 120 51 0 Bifidobacterium bifidum BGN4 484020 leaf 2223664 2 1 0 Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 484021 leaf 5472672 5 0 0 Francisella philomiragia subsp. philomiragia ATCC 25017 484022 leaf 2049711 30 0 0 Sphingobium sp. YBL2 484429 species 5427419 17 9 0 Pelosinus sp. UFO1 484770 species 5115410 54 49 0 Halomicrobium mukohataei DSM 12286 485914 leaf 3332349 9 4 0 Desulfohalobium retbaense DSM 5692 485915 leaf 2909567 6 6 0 Desulfotomaculum acetoxidans DSM 771 485916 leaf 4545624 211 204 0 Pedobacter heparinus DSM 2366 485917 leaf 5167383 49 42 0 Chitinophaga pinensis DSM 2588 485918 leaf 9127347 91 66 0 Streptococcus dysgalactiae subsp. equisimilis GGS_124 486410 leaf 2106340 39 9 0 Streptococcus pneumoniae Taiwan19F-14 487213 leaf 2112148 1 0 0 Streptococcus pneumoniae Hungary19A-6 487214 leaf 2245615 30 0 0 Mycobacterium intracellulare ATCC 13950 487521 leaf 5402402 32 0 0 Xanthomonas translucens pv. undulosa 487909 leaf 4561137 13 3 0 Serratia sp. SCBI 488142 species 5101896 2 0 0 Streptococcus pneumoniae 70585 488221 leaf 2184682 14 1 0 Streptococcus pneumoniae JJA 488222 leaf 2120234 10 0 0 Burkholderia latens 488446 species 6614478 5 0 0 Burkholderia contaminans 488447 species 8509249 14 6 2.35E-16 Candidatus Puniceispirillum marinum IMCC1322 488538 leaf 2753527 9 9 0 Burkholderia metallica 488729 species 7424240 236 5 0 Burkholderia seminalis 488731 species 7648944 7 6 0 Burkholderia diffusa 488732 species 6857833 9 5 0 Neisseria lactamica 020-06 489653 leaf 2220606 6 0 0 Helicoverpa armigera granulovirus 489830 species 169794 2 2 0 Orgyia leucostigma NPV 490711 species 156179 1 1 0 Marinobacter sp. BSs20148 490759 species 4063864 19 12 0 Desulfurococcus kamchatkensis 1221n 490899 leaf 1365223 4 2 0 Escherichia phage Eps7 491003 species 111382 4 0 0 Lactobacillus reuteri SD2112 491077 leaf 2316838 25 14 0 Anoxybacillus flavithermus WK1 491915 leaf 2846746 20 15 5.72E-12 Rhizobium etli CIAT 652 491916 leaf 6448048 55 1 0 Marinomonas posidonica IVIA-Po-181 491952 leaf 3899940 65 59 0 Bacillus velezensis 492670 species 4031426 266 22 0 Lactobacillus phage Lrm1 496874 species 39989 5 0 0 Campylobacter subantarcticus 497724 species 1817765 1 0 0 Kosakonia oryzae 497725 species 5303342 15 15 0 Cyanothece sp. PCC 7822 497965 species 7841948 63 57 0 Cellvibrio japonicus Ueda107 498211 leaf 4576573 21 18 0 Clostridium botulinum B1 str. Okra 498213 leaf 4107013 24 16 0 Clostridium botulinum A3 str. Loch Maree 498214 leaf 4259691 59 41 0 Lactobacillus casei str. Zhang 498216 leaf 2898456 3 0 0 Edwardsiella tarda EIB202 498217 leaf 3804166 16 0 0 Heliobacterium modesticaldum Ice1 498761 leaf 3075407 9 9 0 Thermus aquaticus Y51MC23 498848 leaf 2338641 13 10 0 Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 500634 leaf 2211039 1 0 0 Haliangium ochraceum DSM 14365 502025 leaf 9446314 205 27 0 Rat coronavirus Parker 502102 leaf 31250 1 0 0 Eggerthella sp. YY7918 502558 species 3123671 3 3 0 Yersinia pseudotuberculosis YPIII 502800 leaf 9378877 8 0 0 Yersinia pseudotuberculosis PB1/+ 502801 leaf 9530818 8 0 0 Meiothermus ruber DSM 1279 504728 leaf 3097457 21 20 0 Oligotropha carboxidovorans OM5 504832 leaf 7641703 11 5 0 Ureaplasma parvum serovar 3 str. ATCC 27815 505682 leaf 751679 31 2 0 Halomonas chromatireducens 507626 species 3973651 13 6 0 Clostridium botulinum E3 str. Alaska E43 508767 leaf 3659644 75 0 0 Acinetobacter baumannii AYE 509173 leaf 4048735 17 0 0 Caulobacter segnis ATCC 21756 509190 leaf 4655622 287 281 8.07E-19 Thermoanaerobacter brockii subsp. finnii Ako-1 509193 leaf 2344824 46 0 0 Caldisericum exile AZM16c01 511051 leaf 1558103 52 43 0 Oceanimonas sp. GK1 511062 species 3527244 20 8 0 Candidatus Azobacteroides pseudotrichonymphae 511435 species 1224919 1 0 0 Lactobacillus buchneri NRRL B-30929 511437 leaf 2588309 15 10 0 Aliivibrio 511678 genus 4464689 1 0 0 Streptococcus mutans NN2025 511691 leaf 2013587 26 5 0 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 511995 leaf 1224919 15 14 0 Helicobacter pylori Shi470 512562 leaf 1608548 13 9 0 Mycoplasma crocodyli MP145 512564 leaf 934379 33 28 0 Actinoplanes missouriensis 431 512565 leaf 8773466 13 10 0 Rufibacter tibetensis 512763 species 5413467 79 65 0 Eupatorium vein clearing virus 515444 species 8463 1 1 0 Candidatus Riesia pediculicola USDA 515618 leaf 582127 12 12 0 [Eubacterium rectale] ATCC 33656 515619 leaf 3449685 125 117 0 [Eubacterium] eligens ATCC 27750 515620 leaf 2831389 101 75 0 Clostridium botulinum Ba4 str. 657 515621 leaf 4257769 56 24 0 Butyrivibrio proteoclasticus B316 515622 leaf 4404886 44 41 0 Dictyoglomus turgidum DSM 6724 515635 leaf 1855560 39 33 0 Muricauda lutaonensis 516051 species 3274259 29 25 0 Streptococcus pneumoniae CGSP14 516950 leaf 2209198 5 0 0 Chlorobaculum parvum NCIB 8327 517417 leaf 2289249 13 6 0 Chloroherpeton thalassium ATCC 35110 517418 leaf 3293456 23 23 0 Bifidobacterium angulatum DSM 20098 = JCM 7096 518635 leaf 2021974 16 2 0 Rhodothermus marinus DSM 4252 518766 leaf 3386737 6 1 0 Streptobacillus moniliformis DSM 12112 519441 leaf 1673280 102 96 0 Halorhabdus utahensis DSM 12940 519442 leaf 3116795 2 2 0 Vagococcus teuberi 519472 species 2184285 57 40 0 Neisseria gonorrhoeae NCCP11945 521006 leaf 2236178 2 0 0 Borrelia burgdorferi N40 521007 leaf 1339539 57 3 0 Borrelia burgdorferi JD1 521008 leaf 1531091 63 5 0 Borreliella bissettii DN127 521010 leaf 1403443 33 14 0 Methanosphaerula palustris E1-9c 521011 leaf 2922917 9 9 0 Kosmotoga olearia TBF 19.5.1 521045 leaf 2302126 20 20 0 Atopobium parvulum DSM 20469 521095 leaf 1543805 18 7 0 Tsukamurella paurometabola DSM 20162 521096 leaf 4479724 5 3 0 Capnocytophaga ochracea DSM 7271 521097 leaf 2612925 25 10 0 Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 521098 leaf 3205686 14 13 0 Caldicellulosiruptor bescii DSM 6725 521460 leaf 2931662 69 50 0 Planctopirus limnophila DSM 3776 521674 leaf 5460085 33 28 0 Candidatus Accumulibacter phosphatis clade IIA str. UW-1 522306 leaf 5306133 8 8 0 Stenotrophomonas maltophilia K279a 522373 leaf 4851126 16 12 0 Denitrovibrio acetiphilus DSM 12809 522772 leaf 3222077 52 51 0 Kangiella koreensis DSM 16069 523791 leaf 2852073 19 15 0 Leptotrichia buccalis C-1013-b 523794 leaf 2465610 31 29 0 Staphylococcus aureus subsp. aureus ST398 523796 leaf 2885367 9 0 0 Haloferax mediterranei ATCC 33500 523841 leaf 3904707 2 2 0 Methanosarcina thermophila TM-1 523844 leaf 3127379 40 26 0 Methanothermus fervidus DSM 2088 523846 leaf 1243342 70 41 0 Thermococcus litoralis DSM 5473 523849 leaf 2215172 11 9 0 Thermococcus onnurineus NA1 523850 leaf 1847607 20 12 0 Musca domestica salivary gland hypertrophy virus 523909 leaf 124279 3 3 0 Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 525146 leaf 2873437 12 12 0 Gardnerella vaginalis ATCC 14019 525284 leaf 1667350 59 0 0 Streptococcus pneumoniae TCH8431/19A 525381 leaf 2088772 4 1 0 Desulfomicrobium baculatum DSM 4028 525897 leaf 3942657 67 58 0 Sulfurospirillum deleyianum DSM 6946 525898 leaf 2306351 26 21 0 Thermanaerovibrio acidaminovorans DSM 6589 525903 leaf 1848474 21 8 0 Thermobaculum terrenum ATCC BAA-798 525904 leaf 3101581 17 14 0 Acidimicrobium ferrooxidans DSM 10331 525909 leaf 2158157 1 1 0 Anaerococcus prevotii DSM 20548 525919 leaf 1998633 64 63 0 Sebaldella termitidis ATCC 33386 526218 leaf 4486650 114 107 0 Desulfovibrio salexigens DSM 2638 526222 leaf 4289847 100 97 0 Brachyspira murdochii DSM 12563 526224 leaf 3241804 103 93 0 Geodermatophilus obscurus DSM 43160 526225 leaf 5322497 22 19 2.02E-15 Gordonia bronchialis DSM 43247 526226 leaf 5290012 11 10 3.68E-15 Meiothermus silvanus DSM 9946 526227 leaf 3721669 5 4 0 Bacillus cereus ATCC 4342 526977 leaf 5306298 29 7 0 Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 527001 leaf 4791958 1 0 0 Bacillus thuringiensis Bt407 527021 leaf 6134344 16 11 0 Azospirillum thiophilum 528244 species 7609458 31 20 0 Neisseria gonorrhoeae MS11 528354 leaf 2237793 5 0 0 Alteromonas macleodii ATCC 27126 529120 leaf 4653851 15 4 0 Bacillus thuringiensis YBT-1518 529122 leaf 6672921 42 24 0 Proteus mirabilis HI4320 529507 leaf 4099895 75 5 0 Pyrococcus yayanosii CH1 529709 leaf 1716818 12 12 0 Rhodoluna lacicola 529884 species 1430433 17 13 1.06E-09 Pirellula staleyi DSM 6068 530564 leaf 6196199 13 13 0 Flavobacteriaceae bacterium 3519-10 531844 species 2768102 31 29 2.78E-10 Enterobacteria phage 13a 532076 species 38841 1 1 0 Acidovorax ebreus TPSY 535289 leaf 3796573 24 15 7.58E-11 Candidatus Rhodoluna planktonica 535712 species 1424506 7 4 1.78E-16 Mesorhizobium opportunistum WSM2075 536019 leaf 6884444 26 20 0 Clostridium carboxidivorans P7 536227 leaf 5752782 220 210 0 Clostridium botulinum A2 str. Kyoto 536232 leaf 4155278 19 8 0 Prochlorococcus phage P-SSM3 536453 species 179063 2 2 0 Cyanophage Syn30 536474 species 178807 1 1 0 Candidatus Liberibacter asiaticus str. psy62 537021 leaf 1227328 19 0 0 Actinobacillus pleuropneumoniae serovar 7 str. AP76 537457 leaf 2345435 11 4 0 Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 537971 leaf 2240130 37 9 0 Lactobacillus paracasei subsp. paracasei 8700:2 537973 leaf 3025352 7 2 0 Clostridiales Family XVII. Incertae Sedis 539000 family 2844696 1 0 0 Francisella philomiragia subsp. philomiragia ATCC 25015 539329 leaf 2017400 29 5 0 Ruminococcaceae 541000 family 3744377 1 0 0 Bacillus thuringiensis serovar chinensis CT-43 541229 leaf 6151150 6 0 0 Clostridium phage phiCP39-O 541865 species 38753 1 0 0 Adoxophyes orana nucleopolyhedrovirus 542343 species 111724 2 1 0 Thermoanaerobacterales Family IV. Incertae Sedis 543372 family 3135972 22 0 0 Haloterrigena turkmenica DSM 5511 543526 leaf 5440782 5 2 0 Variovorax paradoxus S110 543728 leaf 6754997 17 7 0 Lactobacillus casei BL23 543734 leaf 3079196 463 0 0 Rhodococcus opacus PD630 543736 leaf 9169032 2 0 0 Altererythrobacter marensis 543877 species 2885033 11 9 0 beta proteobacterium CB 543913 species 2045720 22 10 2.46E-15 Sputnik virophage 543939 species 18343 1 1 0 Geobacillus sp. Y412MC61 544556 species 3667901 12 0 0 Actinomyces oris 544580 species 3042917 13 7 1.54E-10 Bacillus megaterium QM B1551 545693 leaf 5523192 66 15 0 Treponema primitia ZAS-2 545694 leaf 4059867 66 66 0 Treponema azotonutricium ZAS-9 545695 leaf 3855671 47 45 0 Treponema paraluiscuniculi Cuniculi A 545776 leaf 1133390 13 0 0 Calditerrivibrio 545865 genus 2216552 1 0 0 Luz24virus 545932 genus 44030 2 0 0 Neisseria elongata subsp. glycolytica ATCC 29315 546263 leaf 2256647 11 8 0 Filifactor alocis ATCC 35896 546269 leaf 1931012 20 18 0 Selenomonas sputigena ATCC 35185 546271 leaf 2568361 7 7 0 Staphylococcus aureus subsp. aureus str. JKD6008 546342 leaf 2924344 5 3 0 Deinococcus deserti VCD115 546414 leaf 3855329 13 13 0 Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505 547043 leaf 2313752 54 33 0 Yersinia pestis biovar Medievalis str. Harbin 35 547048 leaf 4709501 1 0 0 Hydrogenobaculum sp. 3684 547143 species 1552775 20 0 0 Hydrogenobaculum sp. HO 547144 species 1552931 21 1 0 Hydrogenobaculum sp. SHO 547145 species 1552607 20 0 0 Hydrogenobaculum sp. SN 547146 species 1552931 20 0 0 Bacillus phage PM1 547228 species 50861 1 1 0 Methanohalophilus mahii DSM 5219 547558 leaf 2012424 21 19 0 Natrialba magadii ATCC 43099 547559 leaf 4443643 29 28 0 Staphylococcus aureus subsp. aureus TCH60 548473 leaf 2827166 22 10 0 Corynebacterium aurimucosum ATCC 700975 548476 leaf 2819226 2 1 0 Mobiluncus curtisii ATCC 43063 548479 leaf 2146480 49 47 0 Elephant endotheliotropic herpesvirus 4 548914 species 205896 4 4 0 Ferrimonas balearica DSM 9799 550540 leaf 4279159 26 18 0 Geobacillus sp. Y412MC52 550542 species 3673940 11 0 0 'Nostoc azollae' 0708 551115 leaf 5486145 91 90 0 Streptococcus equi subsp. zooepidemicus MGCS10565 552526 leaf 2024171 40 11 0 Listeria monocytogenes HCC23 552536 leaf 2976212 16 5 0 Dehalogenimonas lykanthroporepellens BL-DC-9 552811 leaf 1686510 13 7 0 Prevotella melaninogenica ATCC 25845 553174 leaf 3168282 62 52 0 Gardnerella vaginalis 409-05 553190 leaf 1617545 12 10 0 Vibrio breoganii 553239 species 4492180 20 18 0 Streptococcus equi subsp. equi 4047 553482 leaf 2253793 39 4 0 Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 554290 leaf 4581797 1 0 0 Thermosediminibacter oceani DSM 16646 555079 leaf 2280035 22 20 0 Zymomonas mobilis subsp. mobilis ATCC 10988 555217 leaf 2143461 6 3 0 Sulfolobus solfataricus 98/2 555311 leaf 2668974 4 0 0 Synechococcus phage S-RSM4 555387 species 194454 5 5 0 Halothiobacillus neapolitanus c2 555778 leaf 2582886 2 2 0 Erwinia phage phiEa21-4 557393 species 84565 1 0 0 Lactobacillus reuteri JCM 1112 557433 leaf 2039414 15 0 0 Lactobacillus reuteri DSM 20016 557436 leaf 1999618 15 0 0 Laribacter hongkongensis HLHK9 557598 leaf 3169329 20 15 0 Mycobacterium kansasii ATCC 12478 557599 leaf 6577228 9 0 0 Acinetobacter baumannii AB307-0294 557600 leaf 3760981 15 0 0 Haemophilus parasuis SH0165 557723 leaf 2269156 18 7 0 Burkholderia pseudomallei 576 557724 leaf 7266604 12 0 0 Rhodobacter sphaeroides KD131 557760 leaf 4711139 10 4 0 Corynebacterium doosanense CAU 212 = DSM 45436 558173 leaf 2698995 13 9 0 Clostridium virus phiCD27 559189 species 50930 2 0 0 Listeria phage P40 560178 species 35638 1 1 0 Pectobacterium carotovorum subsp. carotovorum PC1 561230 leaf 4862913 23 14 0 Pectobacterium parmentieri WPP163 561231 leaf 5063892 33 5 0 Streptococcus pneumoniae ATCC 700669 561276 leaf 2221315 13 2 0 Mycobacterium leprae Br4923 561304 leaf 3268071 6 0 0 Kyrpidia tusciae DSM 2912 562970 leaf 3384766 11 10 0 Achromobacter xylosoxidans C54 562971 leaf 6131060 20 0 0 Sulfurimonas autotrophica DSM 16294 563040 leaf 2153198 42 31 0 Helicobacter pylori G27 563041 leaf 1663013 20 1 0 Listeria monocytogenes L99 563174 leaf 2979198 5 0 0 Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 563178 leaf 642122 4 1 0 Stx2-converting phage 1717 563769 species 62147 5 0 0 Cyclobacteriaceae 563798 family 5341969 1 0 0 Chitinophagaceae 563835 family 7619458 9 0 0 Enterobacteria phage YYZ-2008 564886 species 54896 5 0 0 Geoglobus acetivorans 565033 species 1860815 29 27 0 Brachyspira hyodysenteriae WA1 565034 leaf 3036634 121 10 0 Caulobacter crescentus NA1000 565050 leaf 4042929 4 0 5.14E-11 Ureaplasma urealyticum serovar 10 str. ATCC 33699 565575 leaf 874478 33 29 0 Enterococcus casseliflavus EC20 565655 leaf 3427276 41 23 2.73E-10 Spodoptera litura nucleopolyhedrovirus II 566270 species 148634 1 1 0 Campylobacter jejuni subsp. jejuni IA3902 567106 leaf 1672219 3 0 0 Bacillus anthracis str. CDC 684 568206 leaf 5506763 1 0 0 Lactobacillus rhamnosus GG 568703 leaf 6015162 14 0 0 Lactobacillus rhamnosus Lc 705 568704 leaf 3033106 7 1 0 Bordetella bronchiseptica 253 568707 leaf 5264383 10 0 0 Streptococcus suis BM407 568814 leaf 2170808 3 0 0 Acidaminococcus intestini RyC-MR95 568816 leaf 2487765 21 18 0 Listeria monocytogenes serotype 4b str. CLIP 80459 568819 leaf 2912690 7 0 0 Bacillus thuringiensis serovar kurstaki str. YBT-1520 570416 leaf 13100949 38 3 0 Helicobacter pylori P12 570508 leaf 1684038 20 5 0 Psychrobacter sp. G 571800 species 3113999 10 6 0 Luteipulveratus mongoliensis 571913 species 5420910 10 10 0 Corynebacterium mustelae 571915 species 3474226 5 5 0 Bacillus cereus 03BB102 572264 leaf 10897415 21 1 0 Mycobacterium africanum GM041182 572418 leaf 4389314 3 0 0 Allochromatium vinosum DSM 180 572477 leaf 3669074 14 8 0 Vulcanisaeta distributa DSM 14429 572478 leaf 2374137 53 36 0 Halanaerobium praevalens DSM 2228 572479 leaf 2309262 72 63 0 Arcobacter nitrofigilis DSM 7299 572480 leaf 3192235 121 79 0 Ilyobacter polytropus DSM 2926 572544 leaf 3132314 65 64 0 Ruminiclostridium thermocellum DSM 2360 572545 leaf 3577579 60 0 0 Archaeoglobus profundus DSM 5631 572546 leaf 1563423 8 7 0 Aminobacterium colombiense DSM 12261 572547 leaf 1980592 10 10 0 Desulfovibrio vulgaris RCH1 573059 leaf 3734357 11 0 0 Clostridium cellulovorans 743B 573061 leaf 5262222 175 160 0 Thermoanaerobacter sp. X513 573062 species 2456520 62 16 0 Methanocaldococcus infernus ME 573063 leaf 1328194 46 26 0 Methanocaldococcus fervens AG86 573064 leaf 1507251 74 43 0 Asticcacaulis excentricus CB 48 573065 leaf 4308776 60 58 0 Escherichia coli O26:H11 str. 11368 573235 leaf 5855531 1 0 0 Desulfovibrio magneticus RS-1 573370 leaf 5315620 30 28 0 Sediminispirochaeta smaragdinae DSM 11293 573413 leaf 4653970 34 34 0 Francisella sp. TX077308 573569 species 2035931 104 91 0 Pandoraea oxalativorans 573737 species 6500731 24 15 0 Leptospira interrogans serovar Lai str. IPAV 573825 leaf 4708530 35 0 0 Acetohalobium arabaticum DSM 5501 574087 leaf 2469596 64 62 0 Streptococcus pneumoniae AP200 574093 leaf 2130580 19 0 0 Escherichia coli O127:H6 str. E2348/69 574521 leaf 5069678 1 1 0 Anaplasma centrale str. Israel 574556 leaf 1206806 19 11 0 Photorhabdus temperata 574560 species 5147098 1 0 0 Isosphaera pallida ATCC 43644 575540 leaf 5529304 39 32 0 Prevotella sp. oral taxon 299 str. F0039 575614 leaf 2480269 252 246 0 Vibrio tasmaniensis LGP32 575788 leaf 4974818 17 11 0 Tomato leaf curl Patna betasatellite 575918 species 1349 1 1 0 Polynucleobacter asymbioticus 576611 species 2159490 83 1 5.22E-10 Enterobacteria phage JS10 576790 leaf 171451 21 0 0 Desulfobulbus propionicus DSM 2032 577650 leaf 3851869 19 19 0 Methanocaldococcus vulcanius M7 579137 leaf 1761737 56 43 0 Zymomonas mobilis subsp. pomaceae ATCC 29192 579138 leaf 2061413 33 29 0 Campylobacter volucris LMG 24379 580033 leaf 1517949 38 24 0 Thermoanaerobacterium thermosaccharolyticum DSM 571 580327 leaf 2785752 51 17 0 Thermoanaerobacter italicus Ab9 580331 leaf 2451061 79 51 0 Sideroxydans lithotrophicus ES-1 580332 leaf 3003656 84 60 0 Thermovirga lienii DSM 17291 580340 leaf 1999646 8 8 0 Geobacillus sp. Y4.1MC1 581103 species 3911947 40 13 0 Hirschia baltica ATCC 49814 582402 leaf 3540114 81 80 0 Thermococcus paralvinellae 582419 species 1957742 29 25 0 Methylovorus glucosetrophus SIP3-4 582744 leaf 3082007 22 3 2.34E-15 Hyphomicrobium denitrificans ATCC 51888 582899 leaf 3638969 6 2 1.29E-10 Methylotenera mobilis JLW8 583345 leaf 2547570 56 27 0 Clostridium kluyveri NBRC 12016 583346 leaf 3955303 94 0 0 Coraliomargarita akajimensis DSM 45221 583355 leaf 3750771 6 6 0 Thermoanaerobacter mathranii subsp. mathranii str. A3 583358 leaf 2306092 51 18 0 Pasteurella multocida subsp. multocida str. 3480 584721 leaf 2378127 61 31 0 Bacillus phage Bcp1 584892 species 152778 3 3 0 Escherichia coli IAI1 585034 leaf 4700560 1 1 0 Escherichia fergusonii ATCC 35469 585054 leaf 4643861 27 17 0 Escherichia coli 55989 585055 leaf 5154862 2 0 0 Escherichia coli IAI39 585057 leaf 5132068 6 4 0 Staphylococcus aureus subsp. aureus 55/2053 585143 leaf 2777368 5 1 0 Roseburia hominis A2-183 585394 leaf 3592125 35 29 0 Escherichia coli O103:H2 str. 12009 585395 leaf 5524860 2 2 0 Escherichia coli O111:H- str. 11128 585396 leaf 5766081 8 6 0 Synechococcus sp. KORDI-49 585423 species 2585813 14 14 0 Synechococcus sp. KORDI-52 585425 species 2572069 10 10 0 Gardnerella vaginalis ATCC 14018 = JCM 11026 585528 leaf 1667406 59 0 0 Helicobacter pylori 35A 585535 leaf 1566655 4 3 0 Helicobacter pylori 83 585538 leaf 1617426 4 1 0 Terribacillus aidingensis 586416 species 3577082 48 45 0 Human cosavirus D 586422 species 7215 1 1 0 Pseudomonas chlororaphis 587753 species 6702062 496 83 1.78E-14 Brevundimonas naejangsanensis 588932 species 2971535 15 7 3.74E-10 Desulfurivibrio alkaliphilus AHT 2 589865 leaf 3097763 6 5 0 Alteromonas australica 589873 species 8766305 66 10 0 Ferroglobus placidus DSM 10642 589924 leaf 2196266 13 13 0 Thermotoga naphthophila RKU-10 590168 leaf 1809823 10 3 0 Dickeya zeae Ech586 590409 leaf 4818394 5 2 0 Mus musculus mobilized endogenous polytropic provirus 590745 species 8183 54 22 0 Cellulomonas fimi ATCC 484 590998 leaf 4266344 12 11 0 Acidaminococcus fermentans DSM 20731 591001 leaf 2329769 22 18 0 Staphylothermus hellenicus DSM 12710 591019 leaf 1580347 55 55 0 Shigella flexneri 2002017 591020 leaf 4894492 1 0 0 Streptomyces pratensis ATCC 33331 591167 leaf 7656104 17 8 0 Streptococcus intermedius JTH08 591365 leaf 1933610 39 16 0 Escherichia coli LF82 591946 leaf 4773108 14 0 0 Bacillus megaterium DSM 319 592022 leaf 5097447 64 17 0 Nonlabens dokdonensis DSW-6 592029 leaf 3914632 140 134 0 Helicobacter pylori B38 592205 leaf 1576758 16 9 0 Helleborus net necrosis virus 592206 species 8542 1 1 0 Pantoea sp. At-9b 592316 species 6312783 23 18 0 Thermococcus gammatolerans EJ3 593117 leaf 2045438 6 5 0 Vibrio cholerae MJ-1236 593588 leaf 4236368 8 3 0 Methanoregula formicica SMSP 593750 leaf 2820858 2 2 0 Cellulomonas gilvus ATCC 13127 593907 leaf 3526441 4 3 0 Allofrancisella guangzhouensis 594679 species 1661527 115 33 0 Tolumonas auensis DSM 9187 595494 leaf 3471292 29 29 0 Escherichia coli KO11FL 595495 leaf 10056495 4 0 0 Burkholderia glumae PG1 595500 leaf 7896538 6 1 0 Variovorax paradoxus EPS 595537 leaf 6550056 20 8 0 Arthrobacter sp. A3 595593 species 4458287 12 12 0 Alicycliphilus denitrificans BC 596153 leaf 4835713 17 6 0 Alicycliphilus denitrificans K601 596154 leaf 5070751 15 5 0 Nautilia profundicola AmH 598659 leaf 1676444 32 26 0 Blattabacterium sp. (Periplaneta americana) str. BPLAN 600809 leaf 640442 13 11 0 Thermococcus sibiricus MM 739 604354 leaf 1845800 34 33 0 Caldicellulosiruptor obsidiansis OB47 608506 leaf 2532343 52 34 0 Hydrogenobacter thermophilus TK-6 608538 leaf 3486067 30 0 0 [Clostridium] saccharolyticum WM1 610130 leaf 4662871 68 62 0 Xanthomonas citri subsp. citri 611301 subspecies 89715933 20 0 0 Streptococcus dysgalactiae subsp. equisimilis RE378 617121 leaf 2151145 24 1 0 Sphingomonas melonis TY 621456 leaf 4196755 34 2 0 Zymomonas mobilis subsp. mobilis NCIMB 11163 622759 leaf 2223520 6 1 0 Burkholderia glumae BGR1 626418 leaf 7284636 17 4 0 Sphingobium sp. SYK-6 627192 species 4348133 15 6 0 Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 627343 leaf 4310417 36 0 0 Zymomonas mobilis subsp. mobilis ATCC 29191 627344 leaf 2008345 7 4 0 Bifidobacterium kashiwanohense 630129 species 2354106 2 0 0 Neisseria meningitidis alpha710 630588 leaf 2242947 1 0 0 Shimwellia blattae DSM 4481 = NBRC 105725 630626 leaf 4158725 11 9 0 Spongiibacter 630749 genus 0 1 0 0 Caldicellulosiruptor hydrothermalis 108 632292 leaf 2770676 149 129 0 Caldicellulosiruptor kristjanssonii I77R1B 632335 leaf 2802443 44 27 0 Caldicellulosiruptor kronotskyensis 2002 632348 leaf 2843785 78 48 0 Caldicellulosiruptor lactoaceticus 6A 632516 leaf 2674809 45 28 0 Caldicellulosiruptor owensensis OL 632518 leaf 2428903 64 48 0 Rhodococcus opacus B4 632772 leaf 8834939 11 9 0 Bacillus beveridgei 632773 species 3582268 192 191 0 Olsenella uli DSM 7084 633147 leaf 2051896 3 2 0 Thermosphaera aggregans DSM 11486 633148 leaf 1316595 6 6 0 Brevundimonas subvibrioides ATCC 15264 633149 leaf 3445263 31 13 1.26E-09 Lactobacillus johnsonii FI9785 633699 leaf 1785116 23 14 0 Arsenophonus symbiont of Lipoptena fortisetosa 634113 species 836724 8 8 0 Aggregatibacter aphrophilus NJ8700 634176 leaf 4626291 38 0 0 Komagataeibacter medellinensis NBRC 3288 634177 leaf 3513191 5 5 0 Haloarcula hispanica ATCC 33960 634497 leaf 3890005 7 0 0 Methanobrevibacter ruminantium M1 634498 leaf 2937203 91 84 0 Erwinia pyrifoliae Ep1/96 634499 leaf 4072846 5 3 0 Erwinia billingiae Eb661 634500 leaf 5372268 17 15 0 Edwardsiella ictaluri 93-146 634503 leaf 3812301 7 5 0 Bartonella grahamii as4aup 634504 leaf 2369520 29 25 0 Geobacillus thermoglucosidasius C56-YS93 634956 leaf 3993793 35 9 0 Mycoplasma hyorhinis DBS 1050 634997 leaf 837447 50 0 0 Thermincola potens JR 635013 leaf 3157416 48 47 0 Bacillus cereus biovar anthracis str. CI 637380 leaf 5486649 75 52 0 Mycoplasma fermentans JER 637387 leaf 977524 105 2 0 Acidithiobacillus caldus ATCC 51756 637389 leaf 2987045 3 0 0 Ruminiclostridium thermocellum DSM 1313 637887 leaf 3561619 60 0 0 Shewanella violacea DSS12 637905 leaf 4962103 55 49 0 Streptococcus gallolyticus UCN34 637909 leaf 2350911 34 1 0 Citrobacter rodentium ICC168 637910 leaf 5444283 22 18 0 Helicobacter pylori v225d 637913 leaf 1595604 6 3 0 Lactobacillus koreensis 637971 species 3006812 16 14 0 Thermocrinis albus DSM 14484 638303 leaf 1500577 5 5 0 Deferribacter desulfuricans SSM1 639282 leaf 2542933 75 69 0 Starkeya novella DSM 506 639283 leaf 4765023 9 8 9.81E-11 Hoyosella subflava 639313 species 4863490 1 0 0 Dechlorosoma suillum PS 640081 leaf 3806980 30 23 1.23E-10 Klebsiella variicola At-22 640131 leaf 5458505 19 2 0 Segniliparus rotundus DSM 44985 640132 leaf 3157527 3 2 0 Burkholderia sp. CCGE1001 640510 species 7253494 9 2 0 Burkholderia sp. CCGE1002 640511 species 7884858 10 5 0 Burkholderia sp. CCGE1003 640512 species 7043595 12 10 0 Enterobacter asburiae LF7a 640513 leaf 5012132 27 18 0 Lactococcus phage P087 641487 species 60074 1 0 0 Desulfovibrio desulfuricans ND132 641491 leaf 3858580 27 21 0 Vibrio phage VEJphi 642111 species 6842 7 0 0 Lettuce chlorosis virus 642478 species 17147 1 1 0 Clostridium lentocellum DSM 5427 642492 leaf 4714237 208 198 0 Ostreococcus tauri virus 1 642926 species 191761 31 1 0 Acidovorax avenae subsp. avenae ATCC 19860 643561 leaf 5482170 67 10 5.96E-10 Desulfovibrio aespoeensis Aspo-2 643562 leaf 3629109 26 10 0 Syntrophothermus lipocalidus DSM 12680 643648 leaf 2405559 15 14 0 Marivirga tractuosa DSM 4126 643867 leaf 4516490 74 68 0 Lactobacillus plantarum JDM1 644042 leaf 3197759 10 0 0 Methanocaldococcus sp. FS406-22 644281 species 1773136 133 104 0 Desulfarculus baarsii DSM 2075 644282 leaf 3655731 12 11 0 Micromonospora aurantiaca ATCC 27029 644283 leaf 7025559 9 4 0 Arcanobacterium haemolyticum DSM 20595 644284 leaf 1986154 10 8 0 Methanohalobium evestigatum Z-7303 644295 leaf 2406232 28 26 0 Pseudomonas stutzeri RCH2 644801 leaf 4600489 63 5 7.11E-15 Thermaerobacter marianensis DSM 12885 644966 leaf 2844696 11 11 0 Corynebacterium kroppenstedtii DSM 44385 645127 leaf 2446804 7 7 0 Clostridioides difficile CD196 645462 leaf 4110554 82 25 0 Campylobacter jejuni subsp. jejuni M1 645464 leaf 1616648 3 0 0 Altererythrobacter namhicola 645517 species 2591679 24 18 0 Bacillus subtilis subsp. natto BEST195 645657 leaf 4111218 11 0 0 Shigella phage SP18 645664 leaf 170605 2 1 0 Astrovirus VA1 645687 species 6586 1 1 0 Syntrophobotulus glycolicus DSM 8271 645991 leaf 3406739 73 67 0 Desulfosporosinus acidiphilus SJ4 646529 leaf 4991181 127 110 0 Methanothermococcus okinawensis IH1 647113 leaf 1677455 48 46 0 Rhodomicrobium vannielii ATCC 17100 648757 leaf 4014469 5 5 0 Thermovibrio ammonificans HB-1 648996 leaf 1759526 15 12 0 Penguinpox virus 648998 species 306862 2 2 0 Micromonospora sp. L5 648999 species 6962533 14 8 0 Lujo mammarenavirus 649188 species 10352 1 1 0 Leadbetterella byssophila DSM 17132 649349 leaf 4059653 33 33 0 Truepera radiovictrix DSM 17093 649638 leaf 3260398 12 12 0 Bacillus cellulosilyticus DSM 2522 649639 leaf 4681672 177 169 0 Synergistia 649775 class 1997353 4 0 0 Synergistales 649776 order 1997353 3 0 0 Actinoplanes sp. N902-109 649831 species 9228054 32 26 0 Erysipelothrix rhusiopathiae str. Fujisawa 650150 leaf 1787941 22 1 0 Thaumarchaeota 651137 phylum 0 1 0 0 Desulfobacula toluolica Tol2 651182 leaf 5197905 175 168 0 Human adenovirus 54 651580 leaf 34920 1 1 0 Rhodopseudomonas palustris DX-1 652103 leaf 5404117 10 8 6.06E-15 Rickettsia japonica YH 652620 leaf 1283087 9 1 0 Streptomyces violaceusniger Tu 4113 653045 leaf 11138313 48 40 9.16E-11 Desulfurispirillum indicum S5 653733 leaf 2928377 77 73 0 Listeria monocytogenes 08-5578 653938 leaf 3109678 2 0 0 Zunongwangia profunda SM-A87 655815 leaf 5128187 106 103 0 Bacillus subtilis subsp. spizizenii str. W23 655816 leaf 4027676 36 0 0 Frankia symbiont of Datisca glomerata 656024 species 5340989 9 9 0 Pandoraea faecigallinarum 656179 species 5732664 12 9 2.29E-23 Arthrobacter alpinus 656366 species 8380101 28 20 0 Halanaerobium hydrogeniformans 656519 species 2613117 34 34 0 Francisella noatunensis 657445 species 2600397 40 16 0 Candidatus Liberibacter solanacearum CLso-ZC1 658172 leaf 1258278 13 10 0 Photobacterium gaetbulicola Gung47 658445 leaf 5909413 35 33 0 Mesotoga prima MesG1.Ag.4.2 660470 leaf 2975953 36 35 0 Legionella longbeachae NSW150 661367 leaf 4149158 59 57 0 Methylobacterium extorquens DM4 661410 leaf 6123851 25 8 0 Fimbriimonas ginsengisoli Gsoil 348 661478 leaf 5231762 18 17 0 Neisseria meningitidis alpha14 662598 leaf 2145295 1 0 0 Corynebacterium resistens DSM 45100 662755 leaf 2601311 4 3 0 Mycoplasma genitalium M6320 662945 leaf 579796 26 0 0 Mycoplasma genitalium M6282 662946 leaf 579504 28 0 0 Mycoplasma genitalium M2288 662947 leaf 579558 27 0 0 Enterococcus phage phiEf11 663241 species 42822 4 2 0 Ethanoligenens harbinense YUAN-3 663278 leaf 3008576 20 17 0 Mycobacterium phage ET08 663554 species 155445 1 0 0 Geobacter sulfurreducens KN400 663917 leaf 3714272 4 0 0 Mycoplasma genitalium M2321 663918 leaf 579977 28 0 0 Staphylococcus aureus subsp. aureus TW20 663951 leaf 3075806 1 0 0 Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 663954 leaf 2159491 33 3 0 Erwinia amylovora CFBP1430 665029 leaf 3833832 10 3 0 Spirochaeta thermophila DSM 6192 665571 leaf 2472645 7 5 0 Limnohabitans 665874 genus 0 8 0 0 Lactococcus phage CB13 665883 species 32182 2 0 0 Phycisphaeraceae 666507 family 3884382 1 0 0 Planktomarina temperata RCA23 666509 leaf 3288122 9 7 0 Acidilobus saccharovorans 345-15 666510 leaf 1496453 8 8 0 Methylotenera versatilis 301 666681 leaf 3059871 67 41 1.19E-09 Rhodanobacter denitrificans 666685 species 4225490 36 6 0 Bacillus sp. 1NLA3E 666686 species 4815602 53 52 0 Thermodesulfatator indicus DSM 15286 667014 leaf 2322224 35 32 0 Bacteroides salanitronis DSM 18170 667015 leaf 4308663 22 21 0 Edwardsiella anguillarum ET080813 667120 leaf 4329652 7 3 0 Tenacibaculum dicentrarchi 669041 species 2918253 106 84 0 Candidatus Profftella armatura 669502 species 927880 18 0 0 Cryobacterium arcticum 670052 species 4351229 11 6 0 Hyphomicrobium denitrificans 1NES1 670307 leaf 3808687 9 5 3.06E-14 Oceanithermus profundus DSM 14977 670487 leaf 2439291 7 6 0 Propionibacterium sp. oral taxon 193 671223 species 2649207 12 0 7.25E-15 Streptococcus suis 05HAS68 672190 leaf 2176073 4 0 0 Clostridium phage phiCP26F 673376 species 39188 1 0 0 Enterococcus phage phiFL1A 673832 leaf 38764 1 0 0 Enterococcus phage phiFL2A 673835 leaf 36270 1 0 0 Aciduliprofundum sp. MAR08-339 673860 species 1437090 24 22 0 Candidatus Babela massiliensis 673862 species 1118422 49 48 0 Klebsiella phage KP34 674081 species 43809 1 0 0 Rhodoplanes sp. Z2-YC6860 674703 species 8193889 21 18 5.69E-11 Pseudonocardia dioxanivorans CB1190 675635 leaf 7303989 22 20 0 Francisella cf. tularensis subsp. novicida 3523 676032 leaf 1945310 18 7 0 Rhodococcus sp. WMMA185 679318 species 4444448 7 7 0 Helicobacter mustelae 12198 679897 leaf 1578097 11 10 0 Methanosalsum zhilinae DSM 4017 679901 leaf 2138444 31 22 0 Methanolacinia petrolearia DSM 11571 679926 leaf 2843290 14 14 0 Alistipes finegoldii DSM 17242 679935 leaf 3734239 4 2 0 Bxz1virus 680114 genus 0 2 0 0 Streptomyces scabiei 87.22 680198 leaf 10148695 33 28 0 Agarivorans gilvus 680279 species 4416600 17 17 0 Rothia mucilaginosa DY-18 680646 leaf 2264603 16 4 0 Staphylococcus aureus subsp. aureus ED98 681288 leaf 2847542 13 13 0 Ilumatobacter 682522 genus 4830181 1 0 0 Serratia plymuthica 4Rx13 682634 leaf 5403731 5 2 0 Granulicella mallensis MP5ACTX8 682795 leaf 6237577 14 13 0 Listeria seeligeri serovar 1/2b str. SLCC3954 683837 leaf 2797636 35 31 0 Lactococcus lactis subsp. lactis KF147 684738 leaf 2635654 47 1 0 Helicobacter pylori 52 684950 leaf 1568826 1 0 0 Escherichia coli O83:H1 str. NRG 857C 685038 leaf 4894879 15 0 0 Eel virus European X 685443 leaf 11806 1 0 0 Rhodococcus equi 103S 685727 leaf 5043170 3 2 0 Martelella sp. AD-3 686597 species 5036008 33 30 0 Torque teno virus 1 687340 species 3852 1 1 0 Torque teno virus 3 687342 species 3748 2 2 0 Torque teno virus 25 687364 species 3763 2 2 0 Cyanophage S-RIM50 687803 species 174307 1 0 0 Comamonas testosteroni CNB-2 688245 leaf 5373644 19 3 1.06E-15 Pseudothermotoga thermarum DSM 5069 688269 leaf 2039943 36 33 0 Cellulophaga algicola DSM 14237 688270 leaf 4888353 97 88 0 Campylobacter fetus subsp. venerealis str. 84-112 688354 leaf 1988028 25 10 0 Sphingobium chlorophenolicum L-1 690566 leaf 4573221 29 8 0 Desulfovibrio africanus str. Walvis Bay 690850 leaf 4200534 27 10 0 Geobacillus sp. C56-T3 691437 species 3650813 10 2 0 Rhodococcus phage ReqiPoco6 691964 species 78064 2 2 0 Altererythrobacter dongtanensis 692370 species 3009495 18 7 1.62E-10 Bacillus amyloliquefaciens DSM 7 692420 leaf 3980199 6 0 0 Cronobacter turicensis z3032 693216 leaf 4599092 21 16 0 Cafeteria roenbergensis virus BV-PW1 693272 leaf 617453 19 18 0 Enterobacteriaceae bacterium strain FGI 57 693444 species 4762179 23 21 0 Archaeoglobus veneficus SNP6 693661 leaf 1901943 19 16 0 Helicobacter pylori B8 693745 leaf 1680029 11 5 0 Oscillibacter valericigenes Sjm18-20 693746 leaf 4470622 65 63 0 Shewanella baltica OS117 693970 leaf 5526018 27 1 0 Shewanella baltica OS678 693973 leaf 5368767 416 0 0 Shewanella baltica BA175 693974 leaf 5199401 34 9 0 Deinococcus proteolyticus MRP 693977 leaf 2886836 17 14 0 Riemerella anatipestifer ATCC 11845 = DSM 15868 693978 leaf 4319208 112 0 0 Bacteroides helcogenes P 36-108 693979 leaf 3998906 30 30 0 Sinorhizobium meliloti AK83 693982 leaf 7140471 1 0 0 Beluga Whale coronavirus SW1 694015 species 31686 3 3 0 Paludibacter propionicigenes WB4 694427 leaf 3685504 65 58 0 Pyrolobus fumarii 1A 694429 leaf 1843267 5 3 0 Natronococcus occultus SP4 694430 leaf 4314118 2 2 0 Desulfurella acetivorans A63 694431 leaf 1819992 29 28 0 Marseillevirus marseillevirus 694581 species 368454 1 0 0 Lactobacillus amylovorus GRL1118 695562 leaf 1977087 21 13 0 Bartonella clarridgeiae 73 696125 leaf 1522743 37 32 0 Candidatus Midichloria mitochondrii IricVA 696127 leaf 1183732 29 24 0 Streptococcus constellatus subsp. pharyngis C232 696216 leaf 1935414 39 0 0 Desulfotomaculum ruminis DSM 2154 696281 leaf 3969014 66 65 0 Escherichia coli UMNK88 696406 leaf 5666764 5 2 0 Ostreococcus tauri virus 2 696472 species 184409 3 2 0 Acinetobacter baumannii 1656-2 696749 leaf 4023106 1 0 0 Enterobacteria phage IME08 697227 leaf 172253 36 15 0 Mahella australiensis 50-1 BON 697281 leaf 3135972 20 20 0 Streptococcus pneumoniae gamPNI0373 697283 leaf 2064154 1 0 0 Paenibacillus larvae subsp. larvae DSM 25430 697284 leaf 4056006 38 38 0 Thermoanaerobacter wiegelii Rt8.B1 697303 leaf 2785056 82 43 0 Ruminococcus albus 7 = DSM 20455 697329 leaf 4482087 70 67 0 Thermofilum carboxyditrophus 1505 697581 leaf 1754190 39 6 0 Staphylococcus lugdunensis HKU09-01 698737 leaf 2658366 66 0 0 Oleispira antarctica RB-8 698738 leaf 4406383 54 44 0 Amphibacillus xylanus NBRC 15112 698758 leaf 2569486 29 26 0 Rhizobium tropici CIAT 899 698761 leaf 6686334 53 35 0 Sinorhizobium meliloti BL225C 698936 leaf 6978785 3 1 0 Thermoanaerobacterium thermosaccharolyticum M0795 698948 leaf 2894276 57 28 0 Corynebacterium diphtheriae 31A 698962 leaf 2535346 1 0 0 Corynebacterium diphtheriae C7 (beta) 698963 leaf 2499189 1 0 0 Corynebacterium diphtheriae CDCE 8392 698965 leaf 2433326 2 1 0 Corynebacterium diphtheriae 241 698966 leaf 2426551 5 0 0 Corynebacterium diphtheriae HC01 698967 leaf 2427149 5 0 0 Corynebacterium diphtheriae HC02 698968 leaf 2468612 1 1 0 Corynebacterium diphtheriae HC03 698969 leaf 2478364 2 0 0 Corynebacterium diphtheriae HC04 698970 leaf 2484332 2 2 0 Corynebacterium diphtheriae VA01 698971 leaf 2395441 2 0 0 Corynebacterium diphtheriae BH8 698973 leaf 2485519 2 0 0 Clostridioides difficile M120 699035 leaf 4047729 69 56 0 Mageeibacillus indolicus UPII9-5 699246 leaf 1809746 3 2 0 Thermus phage TMA 699370 species 151483 8 7 0 Coriobacterium glomerans PW2 700015 leaf 2115681 2 2 0 Mycobacterium neoaurum VKM Ac-1815D 700508 leaf 5421267 19 0 0 Niastella koreensis GR20-10 700598 leaf 9033684 68 65 5.16E-11 Escherichia phage vB_EcoM_VR7 700939 leaf 169285 1 0 0 Enterobacter lignolyticus SCF1 701347 leaf 4814049 258 80 0 Pediococcus claussenii ATCC BAA-344 701521 leaf 1978793 27 1 0 Novosphingobium sp. PP1Y 702113 species 5313905 63 23 1.10E-10 Bifidobacterium bifidum PRL2010 702459 leaf 2214656 2 0 0 Corynebacterium sp. NML98-0116 702967 species 2365449 5 5 0 Salmonella enterica subsp. enterica serovar Saintpaul str. SARA26 702982 leaf 4686793 6 6 0 Staphylococcus aureus 04-02981 703339 leaf 2821452 1 1 0 Bifidobacterium animalis subsp. animalis ATCC 25527 703613 leaf 1932693 1 0 0 Pantoea ananatis LMG 20103 706191 leaf 4703373 7 0 0 Desulfomonile tiedjei DSM 6799 706587 leaf 6527027 338 318 0 Sinorhizobium meliloti SM11 707241 leaf 7173736 4 2 0 Mycoplasma suis KI3806 708248 leaf 709270 41 7 0 Mycoplasma gallisepticum str. F 708616 leaf 977612 5 4 0 Sulfuricurvum kujiense DSM 16994 709032 leaf 2819357 58 57 0 Enterobacter phage CC31 709484 leaf 165540 2 1 0 Deinococcus maricopensis DSM 21211 709986 leaf 3498530 3 2 0 Odoribacter splanchnicus DSM 20712 709991 leaf 4392288 42 39 0 Mycoplasma gallisepticum str. R(low) 710127 leaf 1012800 7 0 0 Mycoplasma gallisepticum str. R(high) 710128 leaf 1012027 8 0 0 Mycobacterium chubuense NBB4 710421 leaf 6342624 77 5 0 Mycobacterium rhodesiae NBB3 710685 leaf 6415739 11 11 0 Intrasporangium calvum DSM 43043 710696 leaf 4024382 4 2 0 Actinomyces sp. oral taxon 414 712122 species 3836419 20 20 0 Leptotrichia sp. oral taxon 212 712357 species 2444904 154 136 0 Olsenella sp. oral taxon 807 712411 species 3213585 11 6 0 Selenomonas sp. oral taxon 478 712538 species 2284135 26 7 0 Streptococcus sp. oral taxon 431 712633 species 2177905 25 24 0 Tannerella sp. oral taxon HOT-286 712710 species 2973531 26 26 0 Pantoea vagans C9-1 712898 leaf 4888338 12 10 0 Lactobacillus fermentum CECT 5716 712938 leaf 2100449 10 0 0 Lactobacillus salivarius CECT 5713 712961 leaf 2136138 46 3 0 Selenomonas sp. oral taxon 136 713030 species 2458072 22 19 0 Thioalkalivibrio paradoxus ARh 1 713585 leaf 3756729 23 15 0 Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) 713600 leaf 641771 3 1 0 Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) 713601 leaf 641716 3 1 0 Amycolatopsis mediterranei S699 713604 leaf 20483699 20 0 0 Lactobacillus sanfranciscensis TMW 1.1304 714313 leaf 1375770 13 12 0 Bacillus thuringiensis BMB171 714359 leaf 5643051 32 10 0 Salmonella phage ST160 714583 species 40986 20 0 0 Alteromonas naphthalenivorans 715451 species 4972148 45 31 0 Erwinia amylovora ATCC 49946 716540 leaf 3905604 10 4 0 Enterobacter cloacae subsp. cloacae ATCC 13047 716541 leaf 5598796 40 2 0 Waddlia chondrophila WSU 86-1044 716544 leaf 2131905 23 18 0 Flexistipes sinusarabici DSM 4947 717231 leaf 2526590 54 51 0 Thermobacillus composti KWC4 717605 leaf 4355525 5 4 0 Thioalkalimicrobium aerophilum AL3 717772 leaf 2158359 17 13 0 Thioalkalimicrobium cyclicum ALM1 717773 leaf 1932455 21 19 0 Marinomonas mediterranea MMB-1 717774 leaf 4684316 28 27 0 Hyphomicrobium sp. MC1 717785 species 4757528 8 6 0 Edwardsiella tarda FL6-60 718251 leaf 3728801 746 84 0 Campylobacter jejuni subsp. jejuni S3 718271 leaf 1724586 3 0 0 [Clostridium] clariflavum DSM 19732 720554 leaf 4897678 74 66 0 Bacillus atrophaeus 1942 720555 leaf 4168266 48 0 0 Campylobacter virus CP220 722417 species 177534 3 0 0 Campylobacter virus CPt10 722418 species 175720 3 1 0 Simian retrovirus 4 723802 species 8126 3 2 0 Rahnella sp. Y9602 741091 species 5614252 24 2 0 Delftia sp. Cs1-4 742013 species 6685842 39 9 0 Acidithiobacillus ferrivorans SS3 743299 leaf 3207552 2 1 0 Thermus scotoductus SA-01 743525 leaf 2355186 10 7 0 Spiroplasma eriocheiris CCTCC M 207170 743698 leaf 1365714 33 22 0 Isoptericola variabilis 225 743718 leaf 3307740 3 3 0 Pseudomonas fulva 12-X 743720 leaf 4920769 31 2 0 Pseudoxanthomonas suwonensis 11-1 743721 leaf 3419049 12 10 0 Sphingobacterium sp. 21 743722 species 6226409 40 36 0 Pseudomonas phage PAK_P1 743813 species 93198 5 1 0 Mycoplasma putrefaciens KS1 743965 leaf 832603 28 12 0 Mycoplasma bovoculi M165/69 743966 leaf 760240 47 20 0 Mycoplasma yeatsii GM274B 743967 leaf 895051 39 35 0 Mycoplasma flocculare ATCC 27399 743971 leaf 778866 23 20 0 Actinobacillus suis ATCC 33415 743972 leaf 2501598 11 5 0 Taylorella equigenitalis ATCC 35865 743973 leaf 1732123 25 5 0 Treponema caldarium DSM 7334 744872 leaf 3239340 23 19 0 alpha proteobacterium HIMB59 744985 species 1410127 40 37 0 Lymantria xylina MNPV 745177 species 156344 1 1 0 Sphingomonas sp. MM-1 745310 species 4633613 59 10 5.37E-10 Deinococcus gobiensis I-0 745776 leaf 4406036 23 15 0 Lactococcus lactis subsp. cremoris NZ9000 746361 leaf 2530294 121 0 0 Aequorivita sublithincola DSM 14238 746697 leaf 3520671 65 55 0 Thermodesulfobium narugense DSM 14796 747365 leaf 1898865 32 30 0 Azoarcus sp. KH32C 748247 species 5818755 3 3 0 Pseudogulbenkiania sp. NH8B 748280 species 4332995 31 27 0 Halobacteroides halobius DSM 5150 748449 leaf 2649255 73 71 0 Grapevine Bulgarian latent virus 748667 species 13273 2 2 0 Yersinia pseudotuberculosis str. PA3606 748672 leaf 4830299 3 2 0 Clostridium ljungdahlii DSM 13528 748727 leaf 4630065 195 49 0 Sulfuritalea hydrogenivorans 748811 species 3802648 3 0 0 Nitratifractor salsuginis DSM 16511 749222 leaf 2101285 15 14 0 Deep-sea thermophilic phage D6E 749413 species 49335 2 2 0 Streptomyces bingchenggensis BCW-1 749414 leaf 11936683 57 53 0 Amycolatopsis mediterranei U32 749927 leaf 10236715 10 0 0 Thermus oshimai JL-2 751945 leaf 2401329 39 25 0 Mesorhizobium australicum WSM2073 754035 leaf 6200534 1 0 0 Synechococcus phage S-CAM1 754037 species 198013 2 2 0 Synechococcus phage S-CAM8 754038 species 171407 2 0 0 Synechococcus phage S-RIP1 754041 species 44892 1 1 0 Synechococcus phage S-SKS1 754042 species 208007 2 2 0 Loktanella phage pCB2051-A 754044 species 56958 1 1 0 Vibrio phage PWH3a-P1 754058 species 129155 1 1 0 Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 754252 leaf 2616384 8 0 0 Actinobacillus pleuropneumoniae serovar 8 754345 leaf 2337633 10 3 0 Winogradskyella sp. PG-2 754409 species 3811479 63 62 0 Methylophaga nitratireducenticrescens 754476 species 3137191 20 17 0 Methylophaga frappieri 754477 species 2745290 9 9 0 Paraburkholderia sprentiae WSM5005 754502 leaf 7829542 14 11 0 Mycoplasma hyopneumoniae 7422 754503 leaf 898495 7 1 0 Aggregatibacter actinomycetemcomitans ANH9381 754507 leaf 2136808 18 0 0 Rhizobium leguminosarum bv. trifolii WSM1689 754523 leaf 6903379 17 16 0 Cyanobacterium aponinum PCC 10605 755178 leaf 4176973 82 68 0 Micromonas pusilla virus 12T 755272 species 205622 1 0 0 Clostridium sp. BNL1100 755731 species 4613747 72 66 0 Fluviicola taffensis DSM 16823 755732 leaf 4633577 133 133 0 Rubinisphaera brasiliensis DSM 5305 756272 leaf 6006602 54 22 0 Cellulophaga phage phiST 756282 species 79114 1 1 0 Desulfitobacterium dehalogenans ATCC 51507 756499 leaf 4321753 67 13 0 Bacillus sp. WP8 756828 species 3708888 86 28 0 halophilic archaeon DL31 756883 species 3643158 2 1 0 Herbaspirillum seropedicae SmR1 757424 leaf 5513887 16 0 0 Clostridium botulinum F str. 230613 758678 leaf 4010614 19 0 0 Burkholderia sp. RPE64 758793 species 6964487 3 3 0 Burkholderia sp. RPE67 758796 species 8685756 17 6 0 Leptospira santarosai serovar Shermani str. LT 821 758847 leaf 3983611 126 75 0 Bifidobacterium longum subsp. longum JDM301 759350 leaf 2477838 4 0 0 Ketogulonicigenium vulgare WSH-001 759362 leaf 3277101 3 0 0 Weissella ceti 759620 species 4135763 117 0 0 Streptococcus dysgalactiae subsp. equisimilis AC-2713 759913 leaf 2179445 24 2 0 Brachyspira pilosicoli 95/1000 759914 leaf 2586443 79 30 0 Sphaerochaeta coccoides DSM 17374 760011 leaf 2227296 16 16 0 Hippea maritima DSM 10411 760142 leaf 1694430 20 18 0 Sulfurospirillum barnesii SES-3 760154 leaf 2510109 43 38 0 Haliscomenobacter hydrossis DSM 1100 760192 leaf 8771651 338 200 0 Staphylococcus phage GH15 760530 species 139806 3 0 0 Desulfotomaculum kuznetsovii DSM 6115 760568 leaf 3601386 51 18 0 Streptococcus parasanguinis ATCC 15912 760570 leaf 2153652 70 12 0 Acinetobacter phage Acj61 760732 species 164093 4 4 0 Acinetobacter phage Acj9 760939 species 169947 1 1 0 Runella slithyformis DSM 19594 761193 leaf 6919729 54 46 0 Salinibacter ruber M8 761659 leaf 3832918 14 1 0 Leuconostoc kimchii IMSNU 11154 762051 leaf 2101787 31 19 0 Achromobacter xylosoxidans A8 762376 leaf 7359146 18 15 0 Leuconostoc gelidum subsp. gasicomitatum LMG 18811 762550 leaf 1954080 38 3 0 Rhodothermus marinus SG0.5JP17-172 762570 leaf 3334122 6 3 0 Thermus thermophilus SG0.5JP17-16 762633 leaf 2303227 7 3 0 Pseudopedobacter saltans DSM 12145 762903 leaf 4635236 121 110 0 Hyperthermophilic Archaeal Virus 1 762905 species 22743 1 1 0 Rothia dentocariosa ATCC 17931 762948 leaf 2506025 12 12 1.87E-10 Brochothrix phage BL3 764562 species 41518 2 2 0 Bacillus phage W.Ph. 764595 species 156897 3 3 0 Desulfurococcus mucosus DSM 2162 765177 leaf 1314639 6 6 0 Mesorhizobium ciceri biovar biserrulae WSM1271 765698 leaf 6690028 9 4 0 Colwellia phage 9A 765765 species 104936 5 5 0 Bdellovibrio bacteriovorus W 765869 leaf 3006992 22 14 0 Marichromatium purpuratum 984 765910 leaf 3779112 14 8 0 Thiocystis violascens DSM 198 765911 leaf 5017071 10 7 0 Thioflavicoccus mobilis 8321 765912 leaf 4137521 48 45 0 Parachlamydia acanthamoebae UV-7 765952 leaf 3072383 108 99 0 Helicobacter pylori SJM180 765962 leaf 1658051 7 2 0 Helicobacter pylori PeCan4 765963 leaf 1638269 5 2 0 Helicobacter pylori Cuz20 765964 leaf 1635449 3 1 0 Bacillus paralicheniformis ATCC 9945a 766760 leaf 4376305 16 4 0 Pseudopropionibacterium propionicum F0230a 767029 leaf 3449360 4 4 0 Prevotella denticola F0289 767031 leaf 2937589 32 25 1.59E-10 Frateuria aurantia DSM 6220 767434 leaf 3603458 23 10 0 Lactobacillus fermentum F-6 767453 leaf 2064620 8 0 0 Lactobacillus delbrueckii subsp. bulgaricus ND02 767455 leaf 2131976 22 7 0 Lactobacillus helveticus H9 767456 leaf 1871119 5 0 0 Lactobacillus helveticus H10 767462 leaf 2172383 30 1 0 Streptococcus thermophilus ND03 767463 leaf 1831949 5 1 0 Mycoplasma bovis HB0801 767465 leaf 991702 3 0 0 Lactobacillus plantarum subsp. plantarum P-8 767468 leaf 3246630 4 2 0 Desulfotomaculum gibsoniae DSM 7213 767817 leaf 4855529 81 77 0 Haloquadratum walsbyi C23 768065 leaf 3260476 19 4 0 Halomonas elongata DSM 2581 768066 leaf 4061296 27 9 0 Enterococcus hirae ATCC 9790 768486 leaf 2856440 58 48 0 Serratia sp. AS12 768490 species 5443009 33 0 0 Serratia plymuthica AS9 768492 leaf 5442880 24 0 0 Serratia sp. AS13 768493 species 5442549 31 0 0 Bacillus anthracis str. H9401 768494 leaf 5495471 2 2 0 Calditerrivibrio nitroreducens DSM 19672 768670 leaf 2216552 39 36 0 Desulfurococcus fermentans DSM 16532 768672 leaf 1384116 9 8 0 Thermoproteus tenax Kra 1 768679 leaf 1841542 3 3 0 Mycoplasma suis str. Illinois 768700 leaf 742431 36 2 0 Desulfosporosinus meridiei DSM 13257 768704 leaf 4873567 122 121 0 Desulfosporosinus orientis DSM 765 768706 leaf 5863081 53 51 0 Elephant endotheliotropic herpesvirus 5 768738 species 180800 2 2 0 Fervidobacterium pennivorans DSM 9078 771875 leaf 2166381 27 22 0 Xylella fastidiosa subsp. fastidiosa GB514 788929 leaf 2517383 5 1 0 Helicobacter pylori Sat464 794851 leaf 1567570 3 2 0 Opitutaceae bacterium TAV5 794903 species 7417673 26 22 0 Thermodesulfobacterium geofontis OPF15 795359 leaf 1634377 87 78 0 Hydrogenophaga sp. PBC 795665 species 5232477 14 10 6.48E-15 Halalkalicoccus jeotgali B3 795797 leaf 3698650 1 1 0 Methanosarcina barkeri CM1 796385 leaf 4501171 79 10 0 Bacillus methanolicus MGA3 796606 leaf 3425208 40 38 0 Halopiger xanaduensis SH-6 797210 leaf 4355268 1 1 0 Halostagnicola larsenii XH-48 797299 leaf 4131176 4 4 0 Natronobacterium gregoryi SP2 797304 leaf 3788356 12 9 0 Thermus thermophilus JL-18 798128 leaf 2311212 16 4 0 Streptococcus pyogenes MGAS15252 798300 leaf 1750832 2 0 0 Spiroplasma mirum ATCC 29335 838561 leaf 2265199 52 0 0 Micavibrio aeruginosavorus ARL-13 856793 leaf 2481983 10 7 0 Methylomonas methanica MC09 857087 leaf 5051681 29 29 0 Thermoanaerobacterium xylanolyticum LX-11 858215 leaf 2534358 54 51 0 Corynebacterium variabile DSM 44702 858619 leaf 3433007 3 2 0 Mycoplasma haemofelis Ohio2 859194 leaf 1155937 14 10 0 alpha proteobacterium HIMB5 859653 species 1343202 60 57 0 Candidatus Blochmannia vafer str. BVAF 859654 leaf 722585 41 37 0 Ralstonia solanacearum PSI07 859657 leaf 5605618 10 6 0 Capnocytophaga canimorsus Cc5 860228 leaf 2571406 93 87 0 Kibdelosporangium phytohabitans 860235 species 11759770 18 12 3.70E-20 Agrobacterium sp. H13-3 861208 species 5573770 19 13 0 Glutamicibacter arilaitensis Re117 861360 leaf 3918192 24 23 0 Mycoplasma mycoides subsp. capri LC str. 95010 862259 leaf 1155838 34 20 0 Azospirillum lipoferum 4B 862719 leaf 6846400 51 29 0 Streptomyces sp. SirexAA-E 862751 species 7414440 20 16 0 Halobacteriovorax marinus SJ 862908 leaf 3437906 70 64 0 Bacteroides fragilis 638R 862962 leaf 5373121 46 3 0 Haemophilus influenzae 10810 862964 leaf 1981535 7 0 0 Haemophilus parainfluenzae T3T1 862965 leaf 2086875 25 22 0 Streptococcus intermedius C270 862966 leaf 1960728 20 1 0 Streptococcus intermedius B196 862967 leaf 1996214 23 1 0 Streptococcus constellatus subsp. pharyngis C818 862968 leaf 1935662 39 0 0 Streptococcus constellatus subsp. pharyngis C1050 862969 leaf 1991156 40 1 0 Streptococcus anginosus C1051 862970 leaf 1911706 26 2 0 Streptococcus anginosus C238 862971 leaf 2233640 36 13 0 Clostridium acetobutylicum EA 2018 863638 leaf 4132226 145 0 0 Parascardovia denticolens DSM 10105 = JCM 12538 864564 leaf 1890857 7 6 0 Bat coronavirus BM48-31/BGR/2008 864596 species 29276 1 1 0 Clostridium beijerinckii ATCC 35702 864803 leaf 5999050 203 0 0 Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 865867 leaf 1193808 2 0 0 Weeksella virosa DSM 16922 865938 leaf 2272954 125 107 0 Helicobacter pylori F16 866344 leaf 1575399 4 0 0 Helicobacter pylori F30 866345 leaf 1579693 15 13 0 Helicobacter pylori F57 866346 leaf 1609006 6 3 0 Belliella baltica DSM 15883 866536 leaf 4196595 87 86 0 Haemophilus influenzae F3031 866630 leaf 1985832 10 4 0 Escherichia coli 'BL21-Gold(DE3)pLysS AG' 866768 leaf 4570938 1 0 0 Aerococcus urinae ACS-120-V-Col10a 866775 leaf 2080974 17 12 0 Bifidobacterium breve ACS-071-V-Sch8b 866777 leaf 2327492 1 1 0 Methanothermobacter sp. CaT2 866790 species 1731018 19 7 0 Halobacillus halophilus DSM 2266 866895 leaf 4170008 70 60 0 Cellulophaga lytica DSM 7489 867900 leaf 3765936 166 8 0 Ornithobacterium rhinotracheale DSM 15997 867902 leaf 2399175 66 2 0 Methanomethylovorans hollandica DSM 15978 867904 leaf 2714013 47 34 0 Methanobacterium paludis 868131 species 2546541 97 68 0 Desulfotomaculum nigrificans CO-1-SRB 868595 leaf 2892255 56 51 0 Stenotrophomonas maltophilia JV3 868597 leaf 4544477 7 6 0 Desulfurobacterium thermolithotrophum DSM 11699 868864 leaf 1541968 57 56 0 Treponema succinifaciens DSM 2489 869209 leaf 2897425 134 92 0 Marinithermus hydrothermalis DSM 14884 869210 leaf 2269167 5 4 0 Spirochaeta thermophila DSM 6578 869211 leaf 2560222 34 30 0 Turneriella parva DSM 21527 869212 leaf 4409302 11 5 0 Streptococcus pneumoniae OXC141 869215 leaf 2036867 1 0 0 Streptococcus pneumoniae INV200 869216 leaf 2093317 4 0 0 Streptococcus pneumoniae SPN034156 869303 leaf 2024476 1 0 0 Streptococcus pneumoniae SPN034183 869304 leaf 2037254 7 4 0 Streptococcus pneumoniae SPN994038 869306 leaf 2026239 1 0 0 Streptococcus pneumoniae SPN994039 869307 leaf 2026505 1 0 0 Streptococcus pneumoniae SPNA45 869309 leaf 2129934 12 4 0 Synechococcus phage S-RIM2 R1_1999 869662 leaf 175430 7 7 0 Synechococcus phage S-RIM8 A.HR1 869724 leaf 171211 1 0 0 Helicobacter pylori 908 869727 leaf 1549666 2 0 0 Staphylococcus aureus subsp. aureus JKD6159 869816 leaf 2832165 20 7 0 Clostridium phage phiCTP1 871584 species 59199 1 1 0 Acinetobacter pittii PHEA-2 871585 leaf 3862530 59 13 0 Dehalobacter restrictus DSM 9455 871738 leaf 2943336 32 26 0 Desulfitobacterium dichloroeliminans LMG P-21439 871963 leaf 3624449 21 16 0 Desulfitobacterium metallireducens DSM 15288 871968 leaf 3176073 34 32 0 Mycoplasma hyorhinis HUB-1 872331 leaf 839615 48 3 0 Mycobacterium sinense 875328 species 4643668 4 2 0 Peptoniphilus sp. 1-1 875453 species 1601846 33 29 0 Cupriavidus sp. USMAA2-4 876364 species 8698226 41 10 0 Enterobacteria phage UAB_Phi20 876449 species 41809 13 0 0 Methanobacterium lacus 877455 species 2583753 49 44 0 Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 877468 leaf 4915960 1 0 0 Chryseobacterium sp. StRB126 878220 species 5503743 264 251 0 Listeria monocytogenes SLCC2540 879089 leaf 2976958 3 1 0 Listeria monocytogenes SLCC7179 879090 leaf 2882234 3 0 0 Porphyromonas asaccharolytica DSM 20707 879243 leaf 2186370 65 57 0 Shinella sp. HZN7 879274 species 7354253 19 15 0 Aeromonas phage phiAS4 879628 species 163875 1 1 0 Cyclobacterium marinum DSM 745 880070 leaf 6221273 95 48 0 Flexibacter litoralis DSM 6794 880071 leaf 4919337 134 125 0 Desulfobacca acetoxidans DSM 11109 880072 leaf 3282536 8 7 0 Barnesiella viscericola DSM 18177 880074 leaf 3076856 13 13 0 Bathycoccus sp. RCC1105 virus BpV1 880159 leaf 198519 2 1 0 Micromonas sp. RCC1109 virus MpV1 880161 species 184095 2 2 0 Ostreococcus lucimarinus virus 1 880162 species 194022 8 1 0 Mycoplasma leachii PG50 880447 leaf 1008951 44 17 0 Ketogulonicigenium vulgare Y25 880591 leaf 3288404 4 1 0 Lactobacillus helveticus R0052 880633 leaf 2129206 30 6 0 Methanotorris igneus Kol 5 880724 leaf 1854197 220 201 0 Listeria ivanovii subsp. ivanovii PAM 55 881621 leaf 2928879 53 0 0 Listeria monocytogenes SLCC2479 882020 leaf 2972172 4 0 0 Listeria monocytogenes L312 882094 leaf 2912346 7 0 0 Listeria monocytogenes SLCC2376 882097 leaf 2840185 7 0 0 Vibrio anguillarum 775 882102 leaf 4052047 23 0 0 Paraburkholderia rhizoxinica HKI 454 882378 leaf 3750138 36 3 2.61E-16 Vibrio anguillarum M3 882944 leaf 4117885 23 0 0 Bifidobacterium bifidum S17 883062 leaf 2186882 1 0 0 Burkholderia pseudomallei 1026b 884204 leaf 14469087 3 2 0 Jeongeupia 885864 genus 0 1 0 0 Singulisphaera acidiphila DSM 18658 886293 leaf 9755686 42 33 0 Muricauda ruestringensis DSM 13258 886377 leaf 3842422 36 35 0 Paenibacillus polymyxa SC2 886882 leaf 6238510 65 32 0 Methylovorus sp. MP688 887061 species 2862391 71 48 1.30E-15 Desulfomicrobium orale DSM 12838 888061 leaf 2783374 21 20 0 Eubacterium sulci ATCC 35585 888727 leaf 1739380 32 32 0 Salmonella phage PVP-SE1 889338 leaf 145964 7 0 0 Spirochaeta africana DSM 8902 889378 leaf 3285855 5 4 0 Acinetobacter baumannii MDR-TJ 889738 leaf 4153407 1 0 0 Lactobacillus plantarum subsp. plantarum ST-III 889932 leaf 3307936 3 1 0 Cyanophage MED4-117 889954 species 38834 4 3 0 Prochlorococcus phage MED4-184 889955 species 38327 5 4 0 Prochlorococcus phage MED4-213 889956 species 180977 3 0 0 Bifidobacterium longum subsp. longum BBMN68 890402 leaf 2265943 1 0 0 Lactobacillus acidophilus 30SC 891391 leaf 2097766 11 3 0 Anaerobaculum mobile DSM 13181 891968 leaf 2160700 31 30 0 Plautia stali symbiont 891974 species 4092852 12 10 0 Candidatus Moranella endobia PCIT 903503 leaf 538294 45110 0 0 Vibrio furnissii NCTC 11218 903510 leaf 4916408 10 7 0 Eubacterium limosum KIST612 903814 leaf 4316707 45 41 0 Treponema brennaborense DSM 12168 906968 leaf 3055580 12 8 0 Helicobacter pylori Lithuania75 907237 leaf 1640673 20 4 0 Helicobacter pylori India7 907238 leaf 1675918 5 4 0 Helicobacter pylori SouthAfrica7 907239 leaf 1679829 14 4 0 Helicobacter pylori Gambia94/24 907240 leaf 1712468 51 31 0 Chlamydia trachomatis RC-F(s)/852 907265 leaf 1083893 2 0 0 Chlamydia trachomatis RC-F(s)/342 907269 leaf 1083842 2 0 0 Chlamydia trachomatis RC-J(s)/122 907270 leaf 1061854 2 0 0 Chlamydia trachomatis J/6276tet1 907272 leaf 1080953 2 0 0 Mycoplasma hyopneumoniae 168 907287 leaf 925576 6 0 0 Bhendi yellow vein India betasatellite [India:Aurangabad:OY164:2006] 908010 leaf 1385 5 0 0 Bhendi yellow vein mosaic betasatellite [India:Coimbator:OYCO1:2005] 908072 leaf 1373 5 0 0 Okra enation leaf curl betasatellite [India:Sonipat:EL10:2006] 908277 leaf 1354 5 0 0 Flavobacterium phage FCL-2 908819 species 47142 4 4 0 Prevotella dentalis DSM 3688 908937 leaf 3350206 20 15 0 Human papillomavirus type 132 909331 leaf 7125 1 1 0 Neisseria meningitidis H44/76 909420 leaf 2240883 1 0 0 Lactobacillus johnsonii DPC 6026 909954 leaf 1966342 21 4 0 Escherichia coli P12b 910348 leaf 4935294 4 4 0 Vibrio vulnificus MO6-24/O 914127 leaf 5007768 9 3 0 Kangiella geojedonensis 914150 species 2495242 24 22 0 Methylobacterium sp. AMS5 925818 species 5599206 34 5 0 Erwinia phage phiEa100 925983 species 45554 1 0 0 Erwinia phage phiEa104 925986 leaf 84565 1 0 0 Aeromonas phage PX29 926067 species 222006 4 1 0 Caldilinea aerophila DSM 14535 = NBRC 104270 926550 leaf 5144873 7 7 0 Echinicola vietnamensis DSM 17526 926556 leaf 5608040 41 38 0 Owenweeksia hongkongensis DSM 17368 926562 leaf 4000057 89 79 0 Terriglobus roseus DSM 18391 926566 leaf 5227858 12 6 0 Anaerolinea thermophila UNI-1 926569 leaf 3532378 52 45 0 Acidiphilium multivorum AIU301 926570 leaf 4214744 6 5 0 Sandaracinus amylolyticus 927083 species 10327335 4 3 0 Streptococcus oralis Uo5 927666 leaf 1958690 14 13 0 Mycoplasma capricolum subsp. capripneumoniae M1601 927701 leaf 1016707 17 0 0 Selenomonas ruminantium subsp. lactilytica TAM6421 927704 leaf 3631933 20 20 0 Lactococcus lactis subsp. lactis CV56 929102 leaf 2518737 40 8 0 Clostridium botulinum BKT015925 929506 leaf 3207592 144 102 0 Solitalea canadensis DSM 3403 929556 leaf 5202069 173 161 0 Emticicia oligotrophica DSM 17448 929562 leaf 5220361 127 124 0 Niabella soli DSM 19437 929713 leaf 4697343 43 39 0 Cyanophage P-RSM6 929832 species 192497 19 17 0 Vibrio phage pYD38-B 929835 species 37324 1 1 0 Pseudomonas brassicacearum 930166 species 6843248 394 14 0 Alcanivorax dieselolei B5 930169 leaf 4928223 7 6 0 Bacillus thuringiensis serovar finitimus YBT-020 930170 leaf 5682383 37 14 0 Pseudarthrobacter phenanthrenivorans Sphe3 930171 leaf 4535320 10 7 0 Cotia virus SPAn232 930275 leaf 185139 6 6 0 Escherichia coli O157:H16 930406 leaf 5104557 4 0 0 Listeria monocytogenes J1816 930781 leaf 2947460 8 0 0 Sulfolobus islandicus HVE10/4 930943 leaf 2655201 12 3 0 Yersinia enterocolitica subsp. palearctica Y11 930944 leaf 4625880 49 9 0 Sulfolobus islandicus REY15A 930945 leaf 2522992 11 1 0 Corynebacterium deserti GIMN1.010 931089 leaf 3033893 13 11 0 Candidatus Liberibacter asiaticus str. Ishi-1 931202 leaf 1190853 19 0 0 Clostridium saccharoperbutylacetonicum N1-4(HMT) 931276 leaf 6666445 193 173 0 Pseudomonas putida BIRD-1 931281 leaf 5731541 3 1 0 Acetobacterium woodii DSM 1030 931626 leaf 4044777 33 30 0 Pantoea ananatis AJ13355 932677 leaf 4877279 5 0 0 Listeria monocytogenes SLCC2755 932919 leaf 3023926 2 0 0 Listeria monocytogenes SLCC2372 932920 leaf 3022910 6 0 0 Acidianus hospitalis W1 933801 leaf 2137654 39 35 0 Campylobacter virus NCTC12673 934027 species 135041 5 2 0 Clostridium botulinum B str. Eklund 17B (NRP) 935198 leaf 7677167 233 0 0 Rhodococcus sp. p52 935199 species 5413283 1 0 0 Enterobacter aerogenes EA1509E 935296 leaf 5591105 20 0 0 Vibrio cholerae LMA3984-4 935297 leaf 3738715 7 7 0 Mesorhizobium loti NZP2037 935546 leaf 7481739 14 6 0 Neisseria meningitidis M01-240355 935588 leaf 2287777 1 0 0 Neisseria meningitidis NZ-05/33 935589 leaf 2248966 1 0 0 Neisseria meningitidis M0579 935590 leaf 2324822 1 1 0 Neisseria meningitidis M01-240149 935591 leaf 2223518 1 0 0 Neisseria meningitidis M04-240196 935593 leaf 2250449 1 1 0 Salmonella enterica subsp. enterica serovar Thompson str. ATCC 8391 935705 leaf 4690430 1 0 0 Haemophilus influenzae F3047 935897 leaf 2007018 6 0 0 Mycoplasma hyorhinis MCLD 936139 leaf 829709 36 19 0 Riemerella phage RAP44 936152 species 49329 1 0 0 Streptococcus parauberis KCTC 11537 936154 leaf 2143887 54 52 0 Helicobacter felis ATCC 49179 936155 leaf 1672681 15 13 0 Bacillus subtilis BSn5 936156 leaf 4093599 52 49 0 Staphylococcus pseudintermedius HKU10-03 937773 leaf 2617381 23 15 0 Taylorella equigenitalis MCE9 937774 leaf 1695860 22 1 0 Deinococcus peraridilitoris DSM 19664 937777 leaf 4513714 6 4 0 Salmonella enterica subsp. enterica serovar Sloterdijk str. ATCC 15791 938141 leaf 4817791 2 0 0 Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 938142 leaf 4943435 1 0 0 Acetobacter pasteurianus subsp. paradoxus 940260 subspecies 3216032 49 29 0 Granulicella tundricola 940615 species 5503984 1 0 0 Bacillus phage SP-10 941058 species 143986 3 3 0 Pseudomonas aeruginosa M18 941193 leaf 6327754 1 1 0 Escherichia coli O25b:H4-ST131 941322 leaf 5249449 1 0 0 Escherichia coli VR50 941323 leaf 5196066 2 0 0 Rickettsia slovaca 13-B 941638 leaf 1275089 6 0 0 Bacillus coagulans 2-6 941639 leaf 3073079 40 0 1.57E-10 Mycoplasma haemofelis str. Langford 1 941640 leaf 1147259 9 1 0 Clostridium botulinum H04402 065 941968 leaf 3919740 29 10 0 Neisseria meningitidis WUE 2594 942513 leaf 2227255 2 0 0 California sea lion adenovirus 1 943083 species 31709 1 1 0 Mycoplasma fermentans M64 943945 leaf 1118751 124 21 0 Arcobacter butzleri ED-1 944546 leaf 2256675 57 16 0 Arcobacter sp. L 944547 species 2947662 302 239 0 Tetragenococcus halophilus NBRC 12172 945021 leaf 2562720 61 16 0 Acinetobacter baumannii D1279779 945556 leaf 3711700 27 17 0 Streptococcus suis JS14 945704 leaf 2137435 4 0 0 Ignavibacterium album JCM 16511 945713 leaf 3658997 82 79 0 Candidatus Symbiobacter mobilis CR 946483 leaf 2991840 10 8 0 Paraburkholderia sprentiae 948107 species 7829542 10 0 0 Enterobacteria phage phi92 948870 species 148612 7 7 0 Cronobacter sakazakii SP291 956149 leaf 4518784 10 0 0 Mycoplasma bovis Hubei-1 956483 leaf 948121 3 0 0 Salmonella phage Spc35 977927 species 118351 8 0 0 Vibrio phage ICP1 979525 species 125956 1 1 0 Vibrio phage ICP3 979535 species 39162 1 0 0 Microbacterium testaceum StLB037 979556 leaf 3982034 18 4 4.46E-17 Leuconostoc sp. C2 979982 species 1877273 19 8 0 Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 980422 leaf 959779 33 5 0 Chloracidobacterium thermophilum B 981222 leaf 3695372 6 4 0 Xanthomonas axonopodis pv. citrumelo F1 981368 leaf 4967469 3 1 0 Brucella vulpis 981386 species 3238137 23 19 0 Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 981539 leaf 2362241 40 4 0 Streptococcus pasteurianus ATCC 43144 981540 leaf 2100077 53 29 0 Lacinutrix sp. 5H-3-7-4 983544 species 3296168 165 160 0 Glaciecola sp. 4H-3-7+YE-5 983545 species 5393591 85 33 0 Dokdonia sp. 4H-3-7-5 983548 species 3389993 71 59 0 Burkholderia cepacia ATCC 25416 983594 leaf 8605945 7 1 0 Rubrivivax gelatinosus IL144 983917 leaf 5043253 18 15 0 Francisella cf. novicida Fx1 984129 leaf 1913619 3 3 0 Salmonella enterica subsp. enterica serovar Anatum str. ATCC BAA-1592 984211 leaf 4706101 1 1 0 Saprospira grandis str. Lewin 984262 leaf 4400185 20 15 0 Staphylococcus pseudintermedius ED99 984892 leaf 2572216 23 2 0 Maize rough dwarf fijivirus 984915 species 3164 2 2 0 Staphylococcus argenteus 985002 species 2787638 51 34 0 Staphylococcus aureus subsp. aureus LGA251 985006 leaf 2753827 1 1 0 Vulcanisaeta moutnovskia 768-28 985053 leaf 2298983 62 48 0 Burkholderia multivorans ATCC BAA-247 985079 leaf 6322746 1 1 0 Helicobacter pylori 2018 985080 leaf 1562832 2 0 0 Helicobacter pylori 2017 985081 leaf 1548238 2 0 0 Paenibacillus terrae HPL-003 985665 leaf 6083395 36 32 0 Staphylococcus agnetis 985762 species 2503399 63 59 0 Marinovum algicola DG 898 988812 leaf 5252390 8 7 0 Acidithiobacillus caldus SM-1 990288 leaf 3237599 3 0 0 Xanthomonas campestris pv. raphani 756C 990315 leaf 4941214 15 8 0 Methanosaeta concilii GP6 990316 leaf 3026645 20 18 0 Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 990317 leaf 2377209 28 1 0 [Clostridium] propionicum DSM 1682 991789 leaf 3120417 63 61 0 Clostridium acetobutylicum DSM 1731 991791 leaf 4145581 145 0 0 Polymorphum gilvum SL003B-26A1 991905 leaf 4718963 20 16 0 Riemerella anatipestifer RA-GD 992406 leaf 2166384 34 1 0 Yersinia enterocolitica subsp. palearctica 105.5R(r) 994476 leaf 4621811 27 0 0 Pseudomonas brassicacearum subsp. brassicacearum NFM421 994484 leaf 6843248 11 2 0 Planktothrix phage PaV-LD 994601 species 95299 1 1 0 Pseudomonas stutzeri DSM 4166 996285 leaf 4689946 14 2 0 Salmonella enterica subsp. enterica serovar Typhimurium str. L-3553 996633 leaf 5184452 2 0 0 Corynebacterium ulcerans 0102 996634 leaf 2579188 9 0 0 Paenibacillus mucilaginosus K02 997761 leaf 8819200 24 11 0 Rose rosette virus 997821 species 12356 1 1 0 Bacteroides dorei CL03T12C01 997877 leaf 5310365 159 122 0 Aeromonas veronii B565 998088 leaf 4551783 121 6 0 Lactobacillus casei BD-II 998820 leaf 3127288 463 0 0 Lactobacillus casei LC2W 999378 leaf 3077434 463 0 0 Burkholderia gladioli BSR3 999541 leaf 9052299 57 3 6.65E-15 Leisingera methylohalidivorans DSM 14336 999552 leaf 4650996 14 7 0 Thermoproteus uzoniensis 768-20 999630 leaf 1936063 5 3 0 Lausannevirus 999883 species 346754 8 5 0 Bacillus amyloliquefaciens TA208 999891 leaf 3937511 13 0 0 Pseudomonas aeruginosa AES-1R 1000561 leaf 6343337 4 2 0 Bacillus amyloliquefaciens LL3 1001582 leaf 4001985 5 0 0 Lactobacillus brevis KB290 1001583 leaf 2587877 16 5 0 Pseudomonas mendocina NK-01 1001585 leaf 5434353 19 2 0 Mycobacterium abscessus subsp. bolletii CCUG 48898 = JCM 15300 1001714 leaf 4978382 1 0 0 Escherichia coli PCN033 1001989 leaf 5156873 3 2 0 Avian gyrovirus 2 1002273 species 2383 1 1 0 Candidatus Pelagibacter sp. IMCC9063 1002672 species 1284727 66 61 3.67E-10 Solibacillus silvestris StLB046 1002809 leaf 3984229 206 43 0 Salmonella enterica subsp. enterica serovar Tennessee str. TXSC_TXSC08-19 1003191 leaf 4864410 1 0 0 Streptomyces cattleya NRRL 8057 = DSM 46488 1003195 leaf 16188068 63 19 0 Rickettsia typhi str. TH1527 1003201 leaf 1112372 31 0 0 Rickettsia typhi str. B9991CWPP 1003202 leaf 1112957 31 0 0 Alteromonas macleodii str. 'Black Sea 11' 1004785 leaf 4480507 10 6 0 Alteromonas mediterranea DE1 1004786 leaf 4947126 21 4 0 Alteromonas macleodii str. 'Balearic Sea AD45' 1004787 leaf 4674885 17 8 0 Alteromonas macleodii str. 'English Channel 673' 1004788 leaf 4601785 12 3 0 Streptococcus suis ST1 1004951 leaf 2034321 14 7 0 Streptococcus suis D12 1004952 leaf 2183059 8 2 0 Streptococcus suis SS12 1005041 leaf 2096866 2 2 0 Streptococcus suis D9 1005042 leaf 2177656 4 2 0 Collimonas fungivorans Ter331 1005048 leaf 5186898 13 7 0 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 1005057 leaf 627953 15 12 0 Gallibacterium anatis UMN179 1005058 leaf 2694139 14 13 0 Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 1005090 leaf 653223 29 24 0 Metallosphaera cuprina Ar-4 1006006 leaf 1840348 15 14 0 Bacillus megaterium WSH-002 1006007 leaf 5075293 68 52 0 Acetobacter pasteurianus NBRC 101655 1006554 leaf 3100990 14 11 0 Defluviitoga tunisiensis 1006576 species 2053097 44 34 0 Corynebacterium ulcerans FRC11 1006579 leaf 2442826 6 2 0 Aguacate virus 1006583 species 12408 2 2 0 Pusillimonas sp. T7-7 1007105 species 3924810 10 9 0 Staphylococcus phage Sb-1 1007127 species 127188 1 0 0 Lactobacillus ginsenosidimutans 1007676 species 2590556 32 31 0 Taylorella asinigenitalis MCE3 1008459 leaf 1638559 23 18 0 Gardnerella vaginalis HMP9231 1009464 leaf 1726519 58 14 0 Burkholderia cepacia GG4 1009846 leaf 6467321 9 3 0 Buchnera aphidicola str. USDA (Myzus persicae) 1009856 leaf 651306 41 0 0 Buchnera aphidicola str. W106 (Myzus persicae) 1009857 leaf 651304 41 0 0 Buchnera aphidicola str. G002 (Myzus persicae) 1009858 leaf 651316 41 0 0 Buchnera aphidicola str. F009 (Myzus persicae) 1009859 leaf 651310 41 0 0 Staphylococcus phage S24-1 1010614 species 18168 2 2 0 Streptococcus pyogenes MGAS1882 1010840 leaf 1781029 2 0 0 Synechococcus phage S-CRM01 1026955 species 178563 3 3 0 Enterobacter aerogenes KCTC 2190 1028307 leaf 5280350 218 54 0 Sulfolobus acidocaldarius N8 1028566 leaf 2176362 29 0 0 Sulfolobus acidocaldarius Ron12/I 1028567 leaf 2223983 32 0 0 Neorhizobium galegae bv. orientalis str. HAMBI 540 1028800 leaf 6455027 26 5 0 Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 1028801 leaf 6413184 21 5 0 Pseudomonas sp. StFLB209 1028989 species 6332373 17 13 0 Candidatus Arthromitus sp. SFB-mouse-Japan 1029718 leaf 1620005 56 0 0 Hyphomicrobium nitrativorans NL23 1029756 leaf 3653837 2 2 0 Brucella melitensis NI 1029825 leaf 3294475 2 0 0 Salmonella enterica subsp. enterica serovar Abony str. 0014 1029983 leaf 4737447 15 4 0 Erwinia phage phiEaH2 1029988 species 243050 1 1 0 Listeria monocytogenes M7 1030009 leaf 2976163 6 0 0 Porphyromonas gingivalis TDC60 1030843 leaf 2339898 5 0 0 Campylobacter lari subsp. concheus LMG 11760 1031536 leaf 1502102 29 19 0 Campylobacter insulaenigrae NCTC 12927 1031564 leaf 1465081 68 59 0 Propionibacterium acnes 6609 1031709 leaf 2560282 1 0 0 Oligotropha carboxidovorans OM4 1031710 leaf 3839771 3 0 0 Ralstonia solanacearum Po82 1031711 leaf 5430263 16 0 0 Campylobacter hyointestinalis subsp. hyointestinalis LMG 9260 1031746 leaf 1753385 30 16 0 Campylobacter ureolyticus RIGS 9880 1032069 leaf 1641887 69 66 0 Microlunatus phosphovorus NM-1 1032480 leaf 5683123 7 5 0 Rickettsia heilongjiangensis 054 1032845 leaf 1278471 10 2 0 Halorhabdus tiamatea SARL4B 1033806 leaf 3146160 3 3 0 Escherichia coli NA114 1033813 leaf 4971461 1 1 0 Lactobacillus kefiranofaciens ZW3 1033837 leaf 2354088 51 29 0 Rhodococcus sp. WB1 1033922 species 6148559 12 8 0 Bean necrotic mosaic virus 1033976 species 16510 1 1 0 Rhizobium leguminosarum bv. trifolii CB782 1033991 leaf 6703653 7 3 0 Mycobacterium phage Alice 1034128 species 153401 2 0 0 Flavobacterium branchiophilum FL-15 1034807 leaf 3563292 99 87 1.54E-10 Staphylococcus lugdunensis N920143 1034809 leaf 2595888 63 0 0 Bacillus amyloliquefaciens XH7 1034836 leaf 3939203 14 1 0 Yersinia pestis A1122 1035377 leaf 9332976 6 0 0 Bifidobacterium longum subsp. longum KACC 91563 1035817 leaf 2395764 1 0 0 Arcobacter butzleri 7h1h 1036172 leaf 2253233 61 12 0 Advenella kashmirensis WT001 1036672 leaf 4423879 16 15 0 Paenibacillus mucilaginosus KNP414 1036673 leaf 8663821 14 4 0 Rhodospirillum rubrum F11 1036743 leaf 4352825 21 0 0 Bradyrhizobium japonicum USDA 6 1037409 leaf 9207384 14 0 0 Pseudomonas fluorescens A506 1037911 leaf 6019547 15 6 3.18E-17 PreXMRV-1 1038068 leaf 8197 61 16 0 Planococcus plakortidis 1038856 species 3261818 56 50 0 Candidatus Arthromitus sp. SFB-rat-Yit 1041504 species 1515556 34 26 0 Staphylococcus phage S25-3 1041526 species 139738 1 0 0 Staphylococcus phage S25-4 1041527 species 132123 1 0 0 Candidatus Arthromitus sp. SFB-mouse-Yit 1041809 leaf 1586397 56 0 0 Flavobacterium columnare ATCC 49512 1041826 leaf 3162432 88 41 0 Methanocella conradii HZ254 1041930 leaf 2378438 5 5 0 Clostridium phage phiCP13O 1042122 species 38329 1 0 0 Clostridium phage phiCP34O 1042123 species 38309 1 0 0 Clostridium sp. SY8519 1042156 species 2835737 16 15 0 Brevibacillus laterosporus LMG 15441 1042163 leaf 5153859 90 80 0 Brachyspira pilosicoli P43/6/78 1042417 leaf 2555556 60 20 0 Pseudomonas putida S16 1042876 leaf 5984790 9 2 0 Thermococcus sp. 4557 1042877 species 2011320 145 11 0 Cupriavidus necator N-1 1042878 leaf 8480857 69 1 0 Weissella koreensis KACC 15510 1045854 leaf 1441470 35 32 0 Pseudoxanthomonas spadix BD-a59 1045855 leaf 3452554 8 6 0 Enterobacter cloacae EcWSU1 1045856 leaf 4798091 17 0 0 Brachyspira intermedia PWS/A 1045858 leaf 3308048 106 89 0 Lactococcus lactis subsp. lactis IO-1 1046624 leaf 2421471 20 4 0 Mycobacterium canettii CIPT 140010059 1048245 leaf 4482059 27 25 0 Leptospirillum ferriphilum ML-04 1048260 leaf 2406157 3 1 0 Streptococcus salivarius CCHSS3 1048332 leaf 2217184 107 50 0 Candidatus Moranella endobia 1048758 species 538248 1 0 0 Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 1048834 leaf 3124048 1 0 0 Acinetobacter phage ZZ1 1049283 species 166687 11 11 0 Klebsiella pneumoniae KCTC 2242 1049565 leaf 5462423 8 8 0 Corynebacterium epidermidicanis 1050174 species 2692072 31 24 0 Chlamydia psittaci CP3 1050219 leaf 1175702 8 0 0 Streptococcus equi subsp. zooepidemicus ATCC 35246 1051072 leaf 2167264 37 3 0 Streptococcus thermophilus JIM 8232 1051074 leaf 1929905 17 6 0 Vibrio tubiashii ATCC 19109 1051646 leaf 5540337 34 34 0 Lactobacillus casei 12A 1051650 leaf 2907892 4 0 0 Rhodococcus fascians D188 1051973 leaf 5502110 32 4 1.70E-09 Granulibacter bethesdensis CGDNIH2 1051974 leaf 2736589 11 1 0 Granulibacter bethesdensis CGDNIH3 1052004 leaf 2711143 12 0 0 Granulibacter bethesdensis CGDNIH4 1052095 leaf 2715337 9 0 0 Enterobacteria phage Bp7 1052121 leaf 168066 4 4 0 Bacillus subtilis subsp. spizizenii TU-B-10 1052585 leaf 4207222 28 14 0 Bacillus subtilis subsp. subtilis str. RO-NN-1 1052588 leaf 4011949 2 2 0 Paenibacillus polymyxa M1 1052684 leaf 6231122 58 25 0 Methanococcus maripaludis X1 1053692 leaf 1746697 101 28 0 Sulfuritalea 1054211 genus 3802648 1 0 0 Thermoplasmatales archaeon BRNA1 1054217 species 1461105 6 4 0 Streptococcus pseudopneumoniae IS7493 1054460 leaf 2195458 95 34 0 Salmonella phage 7-11 1054968 species 89916 1 1 0 Burkholderia cenocepacia H111 1055524 leaf 7714893 5 0 0 Helicobacter pylori ELS37 1055527 leaf 1669876 55 49 0 Helicobacter pylori Puno120 1055528 leaf 1637762 12 1 0 Helicobacter pylori Puno135 1055529 leaf 1646139 3 2 0 Helicobacter pylori SNT49 1055530 leaf 1610830 9 3 0 Helicobacter pylori Aklavik117 1055531 leaf 1636125 2 0 0 Helicobacter pylori Aklavik86 1055532 leaf 1507930 3 3 0 Caldisphaera lagunensis DSM 15908 1056495 leaf 1546846 103 99 0 Salmonella enterica subsp. enterica serovar Thompson str. RM6836 1064551 leaf 4707648 1 0 0 Amycolatopsis methanolica 239 1068978 leaf 7237391 209 13 0 Streptococcus infantarius subsp. infantarius CJ18 1069533 leaf 2008249 27 15 0 Lactobacillus ruminis ATCC 27782 1069534 leaf 2066652 28 25 0 Bdellovibrio bacteriovorus str. Tiberius 1069642 leaf 3988594 25 19 0 Candidatus Gullanella endobia 1070130 species 938041 30 17 0 Lactobacillus buchneri CD034 1071400 leaf 2563168 14 9 0 Corynebacterium uterequi 1072256 species 2419437 6 6 0 Escherichia coli O7:K1 str. CE10 1072459 leaf 5378729 2 0 0 Blattabacterium sp. (Blatta orientalis) str. Tarazona 1072467 leaf 638184 17 14 0 Salmonella enterica subsp. enterica serovar Agona str. 392869-2 1072590 leaf 4798530 22 2 0 Basilea psittacipulmonis DSM 24701 1072685 leaf 1959069 18 17 0 Paenibacillus riograndensis SBR5 1073571 leaf 7919576 28 22 0 Cronobacter virus ESP29491 1073767 species 49116 1 0 0 Cronobacter condimenti 1330 1073999 leaf 4499482 4 3 0 Cronobacter universalis NCTC 9529 1074000 leaf 4436873 5 1 0 Mouse kobuvirus M-5/USA/2010 1074213 species 8198 1 1 0 Staphylococcus aureus subsp. aureus HO 5096 0412 1074252 leaf 2832299 1 0 0 Lactobacillus heilongjiangensis 1074467 species 2790548 22 20 0 Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 1074889 leaf 590336 18 15 0 Staphylococcus aureus subsp. aureus ST228 1074919 leaf 22318508 1 0 0 Pasteurella multocida 36950 1075089 leaf 2349518 2 0 0 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 1075399 leaf 609561 15 8 0 Yoka poxvirus 1076255 species 175699 2 2 0 Pantoea rwandensis 1076550 species 4327607 12 9 0 Thiolapillus brandeum 1076588 species 3153637 15 11 0 Streptococcus lutetiensis 033 1076934 leaf 1975547 25 3 0 Herbaspirillum rubrisubalbicans M1 1078773 leaf 5611261 34 26 0 Synechococcus phage ACG-2014c 1079998 species 176043 1 1 0 Synechococcus phage metaG-MbCM1 1079999 species 172879 2 2 0 Leptolyngbya sp. O-77 1080068 species 5480261 32 20 0 Methanomassiliicoccus 1080709 genus 1931651 1 0 0 Borrelia garinii BgVir 1081646 leaf 993811 28 4 0 Pseudomonas putida B6-2 1081940 leaf 6377271 7 2 0 Pelagibacterium halotolerans B2 1082931 leaf 3948887 5 4 0 Mesorhizobium amorphae CCNWGS0123 1082933 leaf 7343952 11 7 0 Bacillus virus G 1084719 species 497513 16 16 0 Glaciecola nitratireducens FR1064 1085623 leaf 4134229 29 28 0 Persicobacter sp. JZB09 1085624 species 8251744 83 77 0 Francisella persica ATCC VR-331 1086726 leaf 3057444 66 0 0 Exiguobacterium antarcticum B7 1087448 leaf 2815863 28 12 0 Lactobacillus rhamnosus ATCC 8530 1088720 leaf 2960339 11 0 0 Novosphingobium pentaromativorans US6-1 1088721 leaf 5457578 43 2 1.82E-13 Francisella hispaniensis FSC454 1088883 leaf 1938636 22 4 0 Pseudomonas aeruginosa NCGM2.S1 1089456 leaf 6764661 3 1 0 Thermacetogenium phaeum DSM 12270 1089553 leaf 2939057 12 8 0 Salmonella phage SPN3US 1090134 species 240413 2 2 0 Melissococcus plutonius DAT561 1090974 leaf 2045253 58 20 0 Bacillus amyloliquefaciens IT-45 1091041 leaf 3936866 31 1 0 Propionibacterium acnes subsp. defendens ATCC 11828 1091045 leaf 2488626 2 1 0 Methylomicrobium alcaliphilum 20Z 1091494 leaf 4796711 52 50 0 Campylobacter fetus subsp. venerealis 97/608 1093099 leaf 2000424 10 2 0 Pseudomonas aeruginosa DK2 1093787 leaf 6402658 1 1 0 Flavobacterium indicum GPTSA100-9 = DSM 17447 1094466 leaf 2993089 74 73 0 Bartonella australis Aust/NH1 1094489 leaf 1596490 12 12 0 Bartonella vinsonii subsp. berkhoffii str. Winnie 1094497 leaf 1802699 40 37 0 Methanolobus psychrophilus R15 1094980 leaf 3072769 17 16 0 Pseudomonas syringae pv. actinidiae ICMP 18884 1095103 leaf 6629992 26 0 0 Pantoea ananatis PA13 1095774 leaf 4867131 15 1 0 Treponema pallidum subsp. pallidum str. Sea 81-4 1095955 leaf 1139203 13 0 0 Pseudonocardia sp. EC080619-01 1096856 species 7205934 29 1 0 Pseudonocardia sp. EC080625-04 1096868 species 6554452 34 5 0 Acinetobacter baumannii BJAB07104 1096995 leaf 4042229 2 0 0 Acinetobacter baumannii BJAB0715 1096996 leaf 4053889 58 0 0 Acinetobacter baumannii BJAB0868 1096997 leaf 4005822 1 0 0 Burkholderia sp. YI23 1097668 species 8896411 17 7 0 Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 1097677 leaf 3063596 5 1 2.45E-16 Acinetobacter baumannii TYTH-1 1100841 leaf 3957368 3 0 0 Hibiscus green spot virus 1100890 species 14702 2 2 0 Lactococcus lactis subsp. cremoris A76 1104322 leaf 2577104 34 9 0 Enterococcus faecium NRRL B-2354 1104325 leaf 2849891 25 6 0 Enterobacter cloacae subsp. dissolvens SDM 1104326 leaf 4968248 8 7 0 Pseudomonas syringae pv. actinidiae ICMP 18708 1104679 leaf 6630003 26 0 0 Rickettsia rickettsii str. Hlp#2 1105101 leaf 1270751 1341 1 0 Rickettsia rickettsii str. Colombia 1105102 leaf 1270083 1 1 0 Rickettsia rickettsii str. Brazil 1105104 leaf 1255681 1357 5 0 Rickettsia canadensis str. CA410 1105107 leaf 1150228 18 4 0 Rickettsia parkeri str. Portsmouth 1105108 leaf 1300386 4 0 0 Rickettsia slovaca str. D-CWPP 1105109 leaf 1275720 6 0 0 Rickettsia australis str. Cutlack 1105110 leaf 1323280 32 12 0 Rickettsia amblyommatis str. GAT-30V 1105111 leaf 1480884 7 1 0 Rickettsia rhipicephali str. 3-7-female6-CWPP 1105113 leaf 1305467 3 1 0 Rickettsia montanensis str. OSU 85-930 1105114 leaf 1279798 10 7 0 Bacteroides phage B124-14 1105171 species 47159 2 2 0 Leuconostoc mesenteroides subsp. mesenteroides J18 1107880 leaf 2017261 21 2 0 Chromobacterium vaccinii 1108595 species 5041230 17 12 0 Rhodococcus phage REQ1 1109712 species 51342 1 0 0 Tistrella mobilis KA081020-065 1110502 leaf 6512983 9 9 0 Methanosaeta harundinacea 6Ac 1110509 leaf 2571034 18 15 0 Campylobacter virus CPX 1110702 species 132662 5 0 0 Thermus sp. CCB_US3_UF1 1111069 species 2263488 20 6 0 Mycoplasma haemocanis str. Illinois 1111676 leaf 919992 32 31 0 Lactococcus lactis subsp. cremoris UC509.9 1111678 leaf 2457347 38 4 0 Spodoptera exigua iflavirus 1 1111710 species 10347 1 1 0 Escherichia phage Akfv33 1112008 species 108853 3 0 0 Gordonia polyisoprenivorans VH2 1112204 leaf 5844299 22 20 0 Alcanivorax sp. NBRC 101098 1113728 species 3095417 15 2 0 Bacillus velezensis CAU B946 1114958 leaf 4019861 4 1 0 Streptococcus parasanguinis FW213 1114965 leaf 2171609 70 13 0 Pseudomonas fluorescens F113 1114970 leaf 6845832 332 13 0 Spiroplasma atrichopogonis 1114980 species 1160484 26 0 0 Mycoplasma hyopneumoniae 168-L 1116211 leaf 921093 6 0 0 Streptococcus macedonicus ACA-DC 198 1116231 leaf 2142762 89 37 0 Vibrio sp. EJY3 1116375 species 5452646 27 9 0 Paenibacillus mucilaginosus 3016 1116391 leaf 8739048 24 8 0 Mycoplasma canis PG 14 1117644 leaf 897443 59 6 0 Elizabethkingia anophelis 1117645 species 4154397 189 31 0 Simiduia agarivorans SA1 = DSM 21679 1117647 leaf 4300227 8 8 0 Lactococcus lactis subsp. lactis NCDO 2118 1117941 leaf 2592264 46 0 0 Staphylococcus phage SpaA1 1118063 species 42784 1 0 0 Arthrobacter sp. Rue61a 1118963 species 5081038 16 7 0 Mycoplasma hyorhinis SK76 1118964 leaf 836897 41 2 0 Bacillus coagulans DSM 1 = ATCC 7050 1121088 leaf 3366995 51 8 0 [Clostridium] stercorarium subsp. stercorarium DSM 8532 1121335 leaf 5944389 102 0 0 [Clostridium] stercorarium subsp. thermolacticum DSM 2910 1121336 leaf 3035622 33 2 0 Corynebacterium callunae DSM 20147 1121353 leaf 2928683 3 3 0 Corynebacterium halotolerans YIM 70093 = DSM 44683 1121362 leaf 3222008 3 2 0 Pseudomonas balearica DSM 6083 1123016 leaf 4383480 82 5 5.98E-14 Sphingomonas sanxanigenens DSM 19645 = NX02 1123269 leaf 6580298 21 12 0 Thalassospira xiamenensis M-5 = DSM 17429 1123366 leaf 4768950 29 28 0 Pseudothermotoga elfii DSM 9442 = NBRC 107921 1123383 leaf 2169860 14 0 0 Pseudothermotoga hypogea DSM 11164 = NBRC 106472 1123384 leaf 4330581 15 5 0 Pseudomonas stutzeri DSM 10701 1123519 leaf 4174118 67 11 0 Klebsiella pneumoniae subsp. pneumoniae Kp13 1123862 leaf 5739888 33 3 0 Pantoea ananatis LMG 5342 1123863 leaf 4908144 16 2 0 Pseudomonas phage OBP 1124849 species 284757 3 3 0 Salmonella enterica subsp. enterica serovar Agona str. 460004 2-1 1124917 leaf 4797171 28 0 0 Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 1124936 leaf 4951478 2 0 0 Pseudomonas protegens CHA0 1124983 leaf 6867980 12 1 0 Morganella morganii subsp. morganii KT 1124991 leaf 3799539 15 1 0 Mycoplasma capricolum subsp. capripneumoniae 87001 1124992 leaf 1017333 17 0 0 Candidatus Thioglobus singularis PS1 1125411 leaf 1714148 92 90 0 Klebsiella pneumoniae subsp. pneumoniae HS11286 1125630 leaf 5682322 1 1 0 Rhizobium sp. NT-26 1125847 species 4577425 8 3 0 Listeria monocytogenes 07PF0776 1126011 leaf 2901562 4 0 0 Bacillus amyloliquefaciens Y2 1126211 leaf 4238624 5 0 0 Paenibacillus beijingensis 1126833 species 5749967 21 17 0 Helicobacter pylori XZ274 1127122 leaf 1656544 7 2 0 Nocardia cyriacigeorgica GUH-2 1127134 leaf 6194645 8 8 0 Bacillus sp. JS 1127744 species 4120406 47 33 0 [Clostridium] acidurici 9a 1128398 leaf 3108248 114 108 0 Helicoverpa zea nudivirus 2 1128424 leaf 231621 23 22 0 Klebsiella phage KP27 1129147 species 174413 2 2 0 Bacillus phage BCP8-2 1129192 species 159071 3 2 0 Mycoplasma hyorhinis GDL-1 1129369 leaf 837480 50 0 0 Paraglaciecola psychrophila 170 1129794 leaf 5413691 60 54 0 Lactobacillus mucosae LM1 1130798 leaf 2434610 29 27 0 Streptococcus pneumoniae ST556 1130804 leaf 2150813 1 0 0 Mycobacterium marinum E11 1131442 leaf 6450522 27 0 0 Dehalobacter sp. CF 1131462 species 3092048 64 19 0 Persea americana endornavirus 1131702 species 13459 2 2 0 Pasteurella multocida subsp. multocida str. HN06 1132496 leaf 2407578 66 40 0 Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 1132507 leaf 4949783 5 0 0 Brachyspira pilosicoli B2904 1133568 leaf 2765477 74 22 0 Francisella tularensis subsp. tularensis WY-00W4114 1133671 leaf 1899252 14 1 0 Nocardia brasiliensis ATCC 700358 1133849 leaf 9436348 5 4 0 Streptomyces hygroscopicus subsp. jinggangensis 5008 1133850 leaf 10383684 27 0 0 Thauera humireducens 1134435 species 4171754 8 8 0 Propionibacterium acnes HL096PA1 1134454 leaf 2549775 8 0 0 Klebsiella michiganensis 1134687 species 29869212 139 67 0 Rhodococcus erythropolis CCM2595 1136179 leaf 6371421 18 13 0 Bacillus phage BCD7 1136534 species 93839 1 1 0 Bacillus phage BPS13 1136731 species 158305 1 0 0 Gordonia sp. QH-11 1136941 species 4428727 3 2 1.06E-10 Xanthomonas citri subsp. citri Aw12879 1137651 leaf 5398685 5 0 0 Cyanophage S-TIM5 1137745 species 161440 2 1 0 Cronobacter sakazakii ES15 1138308 leaf 4268675 8 0 0 Mycobacterium intracellulare MOTT-02 1138382 leaf 5409696 34 0 0 Mycobacterium intracellulare MOTT-64 1138383 leaf 5501090 31 0 0 Ruminiclostridium thermocellum AD2 1138384 leaf 3554854 60 0 0 Mycobacterium yongonense 05-1390 1138871 leaf 5662088 5 0 0 Bacillus phage B4 1141133 species 162596 2 2 0 Cronobacter phage vB_CsaM_GAP31 1141135 leaf 147940 7 3 0 Cronobacter phage vB_CsaM_GAP32 1141136 species 358663 2 2 0 Enterobacteria phage vB_EcoP_ACG-C91 1141139 species 43731 1 0 0 Phycisphaera mikurensis NBRC 102666 1142394 leaf 3884382 8 8 0 Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 1142511 leaf 719535 23 22 0 Chlamydia gallinacea 08-1274/3 1143323 leaf 1067202 55 48 0 Corallococcus coralloides DSM 2259 1144275 leaf 10080619 26 20 0 Kangiella sediminilitoris 1144748 species 2496140 16 13 0 Lysinibacillus varians 1145276 species 4662822 52 46 0 Blastococcus saxobsidens DD2 1146883 leaf 4875340 28 24 9.68E-16 Enterobacteria phage vB_KleM-RaK2 1147094 species 345809 6 1 0 Bifidobacterium asteroides PRL2011 1147128 leaf 2167304 5 3 0 Dehalobacter sp. DCA 1147129 species 3069953 39 0 0 Pasteurella multocida subsp. multocida str. HB03 1147130 leaf 2307684 2 0 0 Enterobacteria phage vB_EcoS_Rogue1 1147155 species 45805 1 0 0 Pseudomonas mandelii JR-1 1147786 leaf 7188564 8 4 0 Flavobacteriaceae bacterium UJ101 1150389 species 3074209 207 189 0 Bifidobacterium dentium JCM 1195 = DSM 20436 1150423 leaf 2635669 43 0 0 Bifidobacterium scardovii JCM 12489 = DSM 13734 1150461 leaf 3158347 3 2 0 Scardovia inopinata JCM 12537 1150468 leaf 1797862 53 52 0 Pararhodospirillum photometricum DSM 122 1150469 leaf 3876289 17 13 0 Bacillus velezensis UCMB5036 1150475 leaf 3910324 4 2 0 Bacillus velezensis UCMB5113 1150476 leaf 3889532 3 0 0 Pseudomonas putida JB 1150601 leaf 5846746 2 1 0 Sulfurospirillum multivorans DSM 12446 1150621 leaf 3175729 27 17 0 Vibrio phage pVp-1 1150989 species 111506 2 2 0 Sphingomonas phage PAU 1150991 species 219372 2 1 0 Rahnella aquatilis HX2 1151116 leaf 5656799 66 41 0 Serratia plymuthica PRI-2C 1154756 leaf 5474685 11 10 0 Streptococcus mutans LJ23 1155071 leaf 2015626 24 7 0 Enterococcus faecium Aus0004 1155766 leaf 3019780 4 0 0 Bacillus velezensis YAU B9601-Y2 1155777 leaf 4242774 3 0 0 Streptococcus sp. I-G2 1156431 species 1992567 16 1 0 Streptococcus sp. I-P16 1156433 species 2023580 25 2 0 Amycolatopsis orientalis HCCB10007 1156913 leaf 8982090 212 11 0 Methylacidiphilum fumariolicum SolV 1156937 leaf 2476671 33 31 0 Thermotoga sp. Cell2 1157947 species 1749904 12 0 0 Thermotoga sp. 2812B 1157948 species 1843731 14 4 0 Providencia stuartii MRSN 2154 1157951 leaf 4402109 26 12 0 Kosakonia sacchari 1158459 species 4902027 14 6 0 Mycoplasma gallisepticum NY01_2001.047-5-1P 1159200 leaf 965525 5 2 0 Mycoplasma gallisepticum NC06_2006.080-5-2P 1159202 leaf 938869 3 0 0 Mycoplasma gallisepticum CA06_2006.052-5-2P 1159203 leaf 976412 4 4 0 Mycoplasma gallisepticum NC08_2008.031-4-3P 1159204 leaf 926650 4 1 0 Cronobacter malonaticus LMG 23826 1159491 leaf 4473761 15 5 0 Cronobacter dublinensis subsp. dublinensis LMG 23823 1159554 leaf 4628405 18 14 0 Cronobacter muytjensii ATCC 51329 1159613 leaf 4364114 2 0 0 Magpie-robin coronavirus HKU18 1159903 species 26689 1 1 0 White-eye coronavirus HKU16 1159907 species 26041 2 2 0 Alteromonas stellipolaris LMG 21856 1160720 leaf 4686200 16 4 0 Ruminococcus bicirculans 1160721 species 2968500 19 18 0 Leuconostoc phage Lmd1 1161930 species 26201 4 0 0 Cronobacter phage CR9 1162290 leaf 151924 1 1 0 Cronobacter phage CR3 1162295 leaf 149273 1 0 0 Leptospirillum ferrooxidans C2-3 1162668 leaf 2559538 15 14 0 Francisella noatunensis subsp. orientalis str. Toba 04 1163389 leaf 1847202 4 4 0 Stenotrophomonas maltophilia D457 1163399 leaf 4769156 1 0 0 Salmonella phage Ent1 1163482 species 42391 3 0 0 Sulfuricella denitrificans skB26 1163617 leaf 3217213 15 14 1.45E-10 Helicobacter pylori Shi112 1163740 leaf 1663456 1 0 0 Helicobacter pylori Shi169 1163741 leaf 1616909 1 1 0 Helicobacter pylori PeCan18 1163742 leaf 1660685 4 0 0 Helicobacter pylori HUP-B14 1163743 leaf 1607584 4 2 0 Helicobacter cetorum MIT 99-5656 1163745 leaf 1847790 74 66 0 Marinobacter hydrocarbonoclasticus ATCC 49840 1163748 leaf 3989480 12 5 0 Candidatus Portiera aleyrodidarum MED (Bemisia tabaci) 1163752 leaf 357461 12 0 0 Leuconostoc gelidum subsp. gasicomitatum KG16-1 1165892 leaf 2050732 45 8 0 Pectobacterium sp. SCC3193 1166016 species 5164411 31 4 0 Enterobacter sp. R4-368 1166130 species 5155034 22 18 0 Desulfocapsa sulfexigens DSM 10523 1167006 leaf 4023512 16 16 0 Sphingomonas sp. NIC1 1167641 species 3660563 48 15 0 Draconibacterium orientale 1168034 species 5132075 50 48 0 Mycobacterium sp. MOTT36Y 1168287 species 5613626 9 1 0 Persicivirga phage P12024S 1168478 species 35700 2 0 0 Persicivirga phage P12024L 1168479 species 35652 2 0 0 Listeria phage vB_LmoM_AG20 1168744 species 133057 1 0 0 Cutibacterium avidum 44067 1170318 leaf 2526138 6 2 0 Calothrix sp. PCC 6303 1170562 leaf 6960392 235 224 0 Acidipropionibacterium acidipropionici ATCC 4875 1171373 leaf 3656170 16 7 0 Salmonella enterica subsp. enterica serovar Typhimurium str. U288 1171376 leaf 5017059 1 0 0 Bibersteinia trehalosi USDA-ARS-USMARC-192 1171377 leaf 2407846 14 0 0 Bordetella holmesii 44057 1172205 leaf 3697138 5 0 0 Helicobacter cinaedi PAGU611 1172562 leaf 2101402 31 6 0 Streptomyces globisporus C-1027 1172567 leaf 7783599 20 16 0 Crinalium epipsammum PCC 9333 1173022 leaf 5620407 61 56 0 Geitlerinema sp. PCC 7407 1173025 species 4681111 6 5 0 Gloeocapsa sp. PCC 7428 1173026 species 5882710 20 15 0 Microcoleus sp. PCC 7113 1173027 species 7966510 138 125 0 Anaplasma phagocytophilum str. JM 1173064 leaf 1481598 7 1 0 Synechococcus sp. PCC 7502 1173263 species 3583735 22 19 0 Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 1173427 leaf 4808805 32 3 0 Listeria phage LP-030-2 1173743 species 38275 1 0 0 Listeria phage LP-026 1173745 species 67150 1 0 0 Listeria phage LP-037 1173747 species 64756 3 2 0 Listeria phage LP-110 1173748 species 65132 1 0 0 Salmonella enterica subsp. enterica serovar Weltevreden str. 1655 1173939 leaf 5129059 5 0 0 Candidatus Liberibacter asiaticus str. gxpsy 1174529 leaf 1268237 19 0 0 Pectobacterium wasabiae CFBP 3304 1175631 leaf 5043228 85 79 0 Burkholderia glumae LMG 2196 = ATCC 33617 1176492 leaf 6820727 20 3 0 Niabella ginsenosidivorans 1176587 species 5627734 102 89 0 Agrobacterium fabrum 1176649 species 5674258 2 0 0 Halomonas huangheensis 1178482 species 4757486 21 15 0 Paenibacillus swuensis 1178515 species 5012599 25 21 0 Bacillus xiamenensis 1178537 species 3637729 60 34 0 Saccharothrix espanaensis DSM 44229 1179773 leaf 9360653 15 15 0 Deinococcus puniceus 1182568 species 2971983 4 4 0 Deinococcus swuensis 1182571 species 3531443 6 5 0 Pseudomonas pseudoalcaligenes CECT 5344 1182590 leaf 4686340 15 0 0 Magnetospira 1182780 genus 0 1 0 0 Pyrococcus sp. ST04 1183377 species 1736885 17 15 0 Campylobacter coli RM1875 1183378 leaf 1858716 14 1 0 Campylobacter coli RM4661 1183379 leaf 1872235 30 4 0 Campylobacter coli RM5611 1183380 leaf 1733165 13 3 0 Gloeobacter kilaueensis JS1 1183438 leaf 4724791 4 4 9.89E-11 Thermogladius cellulolyticus 1633 1184251 leaf 1356318 3 2 0 Anaplasma phagocytophilum str. HZ2 1184253 leaf 1477581 6 0 0 Bdellovibrio exovorus JSS 1184267 leaf 2657893 55 50 0 Mesotoga prima 1184387 species 2975953 3 0 0 Mycobacterium abscessus subsp. abscessus 1185650 subspecies 9373825 8 0 0 Planococcus antarcticus DSM 14505 1185653 leaf 3804624 36 28 0 Pyrococcus furiosus COM1 1185654 leaf 1909827 18 3 0 Blattabacterium sp. (Blaberus giganteus) 1186051 species 632588 26 21 0 Clostridium phage PhiS63 1187894 species 33609 1 1 0 Streptococcus thermophilus MN-ZLW-002 1187956 leaf 1848520 6 0 0 Rhodovulum sulfidophilum DSM 1374 1188256 leaf 4347929 10 0 0 Campylobacter virus CP21 1190451 species 182833 1 0 0 Comamonas testosteroni P19 1191062 leaf 5649348 23 7 4.65E-16 Flammeovirga sp. MY04 1191459 species 7327614 224 213 0 Melioribacter roseus P3M-2 1191523 leaf 3300414 28 24 0 Bacillus subtilis subsp. subtilis str. BSP1 1192196 leaf 4043754 58 0 0 Pelosinus fermentans JBW45 1192197 leaf 5380816 118 91 0 Pseudomonas putida SJTE-1 1193499 leaf 6077201 11 1 0 Pseudomonas aeruginosa SJTD-1 1193501 leaf 6243825 1 0 0 Sulfurospirillum halorespirans DSM 13726 1193502 leaf 3029840 60 51 0 Staphylococcus aureus subsp. aureus CN1 1193576 leaf 2757070 2 0 0 Candidatus Endolissoclinum faulkneri L2 1193729 leaf 1481191 36 30 0 Dehalococcoides mccartyi DCMB5 1193807 leaf 1431902 2 1 0 Salmonella enterica subsp. enterica serovar Stanleyville str. CFSAN000624 1194159 leaf 5102976 9 6 0 Zymomonas mobilis subsp. mobilis NRRL B-12526 1194424 leaf 2178998 18 0 0 Staphylococcus warneri SG1 1194526 leaf 2560716 94 55 0 Lactobacillus salivarius str. Ren 1194971 leaf 1978364 33 2 0 Staphylococcus phage StauST398-1 1195068 species 45242 1 0 0 Bacillus phage vB_BceM-Bc431v3 1195072 species 158621 1 0 0 Bacillus thuringiensis MC28 1195464 leaf 6694533 115 45 0 Bacillus oceanisediminis 2691 1196031 leaf 5848607 97 91 0 Snodgrassella alvi wkB2 1196094 leaf 2527978 232 219 0 Gilliamella apicola 1196095 species 3139412 100 94 0 Listeria monocytogenes serotype 4b str. 81-0861 1196161 leaf 2974403 1 0 0 Pseudomonas stutzeri CCUG 29243 1196835 leaf 4709064 52 32 0 Mycoplasma wenyonii str. Massachusetts 1197325 leaf 650228 27 27 0 Cloacibacillus porcorum 1197717 species 3585187 8 7 0 Salmonella bongori N268-08 1197719 leaf 4773537 16 4 0 Staphylococcus phage Ipla7 1197953 species 42123 1 1 0 Granulicella tundricola MP5ACTX9 1198114 leaf 5503984 47 40 0 Cycloclasticus zancles 78-ME 1198232 leaf 2655425 34 24 0 Methanoregulaceae 1198451 family 2762239 1 0 0 Mycobacterium abscessus subsp. bolletii str. GO 06 1198627 leaf 4687873 4 0 0 Streptococcus mutans GS-5 1198676 leaf 2027088 18 2 0 secondary endosymbiont of Ctenarytaina eucalypti 1199245 species 1441139 14 14 0 Corynebacterium terpenotabidum Y-11 1200352 leaf 2751233 9 6 0 Staphylococcus phage Stau2 1200862 species 133798 3 0 0 Campylobacter jejuni subsp. jejuni PT14 1201032 leaf 1635301 8 5 0 Enterococcus faecalis ATCC 29212 1201292 leaf 3048131 19 4 0 Methanoculleus bourgensis MS2 1201294 leaf 2789774 2 0 0 Candidatus Carsonella ruddii HT isolate Thao2000 1202539 leaf 157543 3 3 0 Streptomyces hygroscopicus subsp. jinggangensis TL01 1203460 leaf 10077952 27 0 0 Corynebacterium glutamicum K051 1204414 leaf 3309400 1 0 0 Salmonella phage SSE121 1204529 leaf 147745 6 1 0 Bacillus phage phiAGATE 1204533 leaf 149844 1 1 0 Clostridium phage phiMMP02 1204534 species 48396 3 0 0 Clostridium phage phiMMP04 1204535 species 31674 2 1 0 Enterococcus phage EfaCPT1 1204540 species 40923 2 2 0 Staphylococcus virus SA11 1204543 species 136326 3 2 0 Nocardiopsis alba ATCC BAA-2165 1205910 leaf 5848211 11 10 0 Enterococcus faecalis D32 1206105 leaf 3062505 10 6 0 Candidatus Portiera aleyrodidarum BT-B-HRs 1206109 leaf 709900 19 0 0 Pseudomonas sp. UW4 1207075 species 6183388 55 6 0 Burkholderia pseudomultivorans 1207504 species 7956789 165 2 2.52E-09 Aeromonas media WS 1208104 leaf 4788430 124 16 0 Thalassolituus oleivorans R6-15 1208320 leaf 3764053 14 6 0 Celeribacter indicus 1208324 species 4969388 15 11 0 Salmonella enterica subsp. enterica serovar Abaetetuba str. ATCC 35640 1208611 leaf 4547600 1 1 0 Bordetella bronchiseptica MO149 1208658 leaf 5091817 17 2 0 Bordetella parapertussis Bpp5 1208660 leaf 4899574 21 0 0 Candidatus Kinetoplastibacterium crithidii TCC036E 1208918 leaf 821930 13 4 0 Candidatus Kinetoplastibacterium desouzaii TCC079E 1208919 leaf 833125 48 44 0 Candidatus Kinetoplastibacterium oncopeltii TCC290E 1208920 leaf 810172 10 10 0 Candidatus Kinetoplastibacterium galatii TCC219 1208921 leaf 822140 16 15 0 Candidatus Kinetoplastibacterium blastocrithidii TCC012E 1208922 leaf 820029 41 0 0 Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis) 1208923 leaf 820037 42 1 0 Tepidanaerobacter acetatoxydans Re1 1209989 leaf 5521119 616 0 0 Enterobacter cloacae subsp. cloacae ENHKU01 1211025 leaf 4726582 11 3 0 Stenotrophomonas phage IME13 1211280 species 162327 1 1 0 Pseudomonas putida NBRC 14164 1211579 leaf 6156701 8 1 0 Caulobacter virus Swift 1211644 species 219216 1 1 0 Vibrio parahaemolyticus BB22OP 1211705 leaf 5103524 3 1 0 Legionella fallonii LLAP-10 1212491 leaf 4434890 52 49 0 Streptococcus suis 6407 1214179 leaf 2292360 3 3 0 Turkey gallivirus 1214230 leaf 8496 1 0 0 Streptomyces collinus Tu 365 1214242 leaf 8377286 16 12 0 Pseudomonas putida S12 1215087 leaf 6382434 4 1 0 Pseudomonas putida HB3267 1215088 leaf 5956110 14 7 0 Planococcus halocryophilus 1215089 species 3424893 17 14 0 Liberibacter crescens BT-1 1215343 leaf 1504659 53 0 0 Lactobacillus casei W56 1215914 leaf 3132096 463 0 0 Clostridium bornimense 1216932 species 3617025 142 132 0 Dyella japonica A8 1217721 leaf 4831185 9 6 0 Bacillus thuringiensis HD-789 1217737 leaf 6334630 51 3 0 Bacillus cereus FRI-35 1217984 leaf 5382319 36 21 0 Bacillus thuringiensis HD-771 1218175 leaf 6438373 48 16 0 Chlamydia psittaci GR9 1218353 leaf 1147152 1 0 0 Chlamydia psittaci MN 1218354 leaf 1175981 8 0 0 Chlamydia psittaci WS/RT/E30 1218356 leaf 1148342 7 0 0 Chlamydia psittaci M56 1218357 leaf 1168938 9 2 0 Chlamydia psittaci WC 1218358 leaf 1179818 6 0 0 Pectobacterium carotovorum subsp. carotovorum PCC21 1218933 leaf 4842771 13 12 0 Sphingopyxis terrae NBRC 15098 1219058 leaf 3983415 22 0 0 Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 1219067 leaf 5168686 24 2 0 Vibrio alginolyticus NBRC 15630 = ATCC 17749 1219076 leaf 5146637 41 1 0 Fictibacillus phosphorivorans 1221500 species 4230665 85 78 0 Pseudomonas fluorescens NCIMB 11764 1221522 leaf 6998154 44 33 0 Amycolatopsis mediterranei RB 1221524 leaf 10246864 10 0 0 Acinetobacter phage Bphi-B1251 1221835 species 45364 1 0 0 Mannheimia haemolytica USDA-ARS-USMARC-184 1222034 leaf 2524796 9 2 0 Corynebacterium humireducens NBRC 106098 = DSM 45392 1223515 leaf 2681312 22 20 0 Bradyrhizobium sp. CCGE-LA001 1223566 species 7833499 8 4 0 Sulfuritalea hydrogenivorans sk43H 1223802 leaf 3802648 4 3 3.95E-20 Corynebacterium marinum DSM 44953 1224162 leaf 2729219 3 3 0 Corynebacterium maris DSM 45190 1224163 leaf 2833547 7 3 0 Corynebacterium vitaeruminis DSM 20294 1224164 leaf 2931780 10 8 4.79E-10 Gluconobacter oxydans H24 1224746 leaf 3816232 9 6 0 Pseudomonas mendocina S5.2 1225174 leaf 5372474 17 4 0 Bartonella quintana RM-11 1225179 leaf 1587646 26 8 0 Dickeya solani IPO 2222 1225786 leaf 4919833 9 3 0 Bacillus velezensis AS43.3 1225788 leaf 3961368 2 0 0 Listeria phage P70 1225800 species 67170 1 0 0 Lactobacillus paracasei subsp. paracasei JCM 8130 1226298 leaf 3017804 5 1 0 Canis familiaris papillomavirus 13 1226723 leaf 8228 1 0 0 Azospirillum humicireducens 1226968 species 3181617 5 0 0 Hymenobacter swuensis DY53 1227739 leaf 5252070 19 11 0 Piscirickettsia salmonis LF-89 = ATCC VR-1361 1227812 leaf 3450064 21 1 0 cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko 1228987 leaf 2794318 43 40 0 Riemerella anatipestifer RA-CH-1 1228997 leaf 2309519 48 4 0 Paraburkholderia phenoliruptrix BR3459a 1229205 leaf 7651131 6 2 0 Staphylococcus aureus 08BA02176 1229492 leaf 2782313 8 0 0 Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA 1229512 leaf 632490 16 9 0 Mycobacterium avium subsp. hominissuis TH135 1229671 leaf 5145928 3 0 0 Campylobacter phage CP30A 1229752 species 133572 6 1 0 Escherichia phage phAPEC8 1229753 species 147737 1 1 0 Leuconostoc gelidum JB7 1229756 leaf 1893499 24 10 0 Escherichia phage EC6 1229757 species 86231 1 0 0 Leuconostoc carnosum JB16 1229758 leaf 1773468 37 19 0 Chlamydia avium 10DC88 1229831 leaf 1048269 31 29 0 Candidatus Nitrosopumilus sp. AR2 1229909 species 1690905 30 30 0 Sinorhizobium meliloti Rm41 1230587 leaf 7149690 3 2 0 Clostridium tetani 12124569 1231072 leaf 2865850 100 40 0 Streptococcus agalactiae SA20-06 1231389 leaf 1820886 1 0 0 Asaia bogorensis NBRC 16594 1231624 leaf 3198265 6 1 0 Cardinium endosymbiont cEper1 of Encarsia pergandiella 1231626 leaf 944930 16 16 0 Corynebacterium glutamicum SCgG1 1232381 leaf 3350620 5 0 0 Corynebacterium glutamicum SCgG2 1232383 leaf 3350619 5 0 0 Corynebacterium glutamicum ZL-6 1232384 leaf 3332458 8 0 0 [Brevibacterium] flavum ZL-1 1232385 leaf 3340941 32 0 0 Haemophilus influenzae 2019 1232659 leaf 1969659 11 0 0 Mycobacterium indicus pranii MTCC 9506 1232724 leaf 5589007 36 0 0 Bacillus subtilis XF-1 1233100 leaf 4061186 4 0 0 Geobacillus sp. GHH01 1233873 species 3583134 21 2 3.63E-13 Chlamydia pecorum PV3056/3 1234367 leaf 1104552 50 2 0 Chlamydia pecorum W73 1234368 leaf 1106534 50 0 0 Chlamydia pecorum P787 1234369 leaf 1106409 53 0 0 Lawsonia intracellularis N343 1234378 leaf 1719192 31 0 0 Borrelia garinii NMJW1 1234596 leaf 902789 24 1 0 Candidatus Moranella endobia PCVAL 1234603 leaf 538203 45110 0 0 Carnobacterium maltaromaticum LMA28 1234679 leaf 3650416 75 66 0 Sinorhizobium meliloti GR4 1235461 leaf 7141709 6 3 0 Staphylococcus phage vB_SauM_Remus 1235659 species 134643 5 0 0 Staphylococcus phage vB_SauM_Romulus 1235660 species 131332 5 0 0 Acinetobacter phage Abp1 1235824 species 42185 1 1 0 Kosakonia sacchari SP1 1235834 leaf 4902027 6 0 0 Candidatus Pantoea carbekii 1235990 species 2348022 33 1 0 Janthinobacterium sp. B9-8 1236179 species 4726850 32 27 0 Prevotella fusca JCM 17724 1236517 leaf 3261806 24 19 0 Moraxella catarrhalis BBH18 1236608 leaf 1863286 22 0 0 Candidatus Methanomethylophilus alvus Mx1201 1236689 leaf 1666795 2 2 0 Wolbachia endosymbiont of Drosophila simulans wNo 1236908 leaf 1301823 73 67 0 Wolbachia endosymbiont of Drosophila simulans wHa 1236909 leaf 1295804 186 29 0 Escherichia phage HX01 1237364 leaf 169158 1 0 0 Sodalis praecaptivus 1239307 species 5159425 8 6 0 Staphylococcus phage JD007 1239383 species 141836 3 3 0 Candidatus Portiera aleyrodidarum BT-QVLC 1239881 leaf 708400 17 0 0 Borrelia afzelii HLJ01 1239934 leaf 905471 11 2 0 Candidatus Blochmannia chromaiodes str. 640 1240471 leaf 791219 11 4 0 Campylobacter fetus subsp. fetus 04/554 1240980 leaf 1826626 4 1 0 Abalone herpesvirus Victoria/AUS/2009 1241371 species 211518 10 10 0 Burkholderia thailandensis 2002721723 1241582 leaf 6577133 10 1 0 Burkholderia pseudomallei NCTC 13179 1241583 leaf 7337157 2 1 0 Sulfolobus islandicus LAL14/1 1241935 leaf 2465177 15 4 0 Acinetobacter johnsonii XBB1 1242245 leaf 4081329 86 77 1.15E-10 Klebsiella pneumoniae CG43 1244085 leaf 5166857 1 0 0 Campylobacter fetus subsp. testudinum 03-427 1244528 leaf 1775480 52 1 0 Campylobacter fetus subsp. testudinum Sp3 1244529 leaf 1819051 53 3 0 Campylobacter iguaniorum 1244531 species 5108357 70 25 0 Bradyrhizobium oligotrophicum S58 1245469 leaf 8264165 6 2 0 Pseudomonas resinovorans NBRC 106553 1245471 leaf 6484828 3 2 0 Variovorax paradoxus B4 1246301 leaf 7148516 16 8 5.57E-17 Streptococcus suis SC070731 1246365 leaf 2138568 1 0 0 Bacillus lehensis G1 1246626 leaf 3993073 72 72 0 Mycoplasma cynos C142 1246955 leaf 998123 40 40 0 Actinoplanes friuliensis DSM 7358 1246995 leaf 9376071 25 19 0 Bordetella holmesii ATCC 51541 1247649 leaf 3699674 5 0 0 Advenella mimigardefordensis DPN7 1247726 leaf 4764126 16 15 0 Helicobacter pylori OK113 1248725 leaf 1616617 9 2 0 Helicobacter pylori OK310 1248726 leaf 1595436 1 0 0 endosymbiont of unidentified scaly snail isolate Monju 1248727 species 2597759 2 2 0 Escherichia coli O145:H28 str. RM12581 1248823 leaf 5737293 1 0 0 Escherichia coli O145:H28 str. RM13514 1248902 leaf 5737294 1 0 0 Escherichia coli O145:H28 str. RM12761 1248903 leaf 5559014 5 0 0 Escherichia coli O145:H28 str. RM13516 1248915 leaf 5559008 5 0 0 Burkholderia pseudomallei NCTC 13178 1249468 leaf 7391364 1 1 0 Burkholderia pseudomallei MSHR2543 1249472 leaf 7446569 18 2 0 Burkholderia pseudomallei MSHR491 1249473 leaf 7356376 19 2 0 Burkholderia pseudomallei MSHR511 1249474 leaf 7316085 4 3 1.30E-10 Burkholderia pseudomallei MSHR840 1249475 leaf 7129813 6 1 0 Burkholderia pseudomallei NAU20B-16 1249476 leaf 7313851 2 1 1.30E-10 Mannheimia haemolytica USDA-ARS-USMARC-185 1249526 leaf 2544668 13 1 0 Mannheimia haemolytica USDA-ARS-USMARC-183 1249531 leaf 2658332 18 0 0 Pseudohongiella spirulinae 1249552 species 3345119 14 14 0 Serratia marcescens FGI94 1249634 leaf 4858216 25 21 0 Ehrlichia chaffeensis str. West Paces 1249650 leaf 1170935 11 0 0 Ehrlichia chaffeensis str. Heartland 1249651 leaf 1172721 11 0 0 Ehrlichia chaffeensis str. Jax 1249652 leaf 1176890 15 0 0 Ehrlichia chaffeensis str. Liberty 1249653 leaf 1176202 14 0 0 Ehrlichia chaffeensis str. Osceola 1249654 leaf 1175197 16 0 0 Ehrlichia chaffeensis str. Saint Vincent 1249655 leaf 1173884 12 0 0 Ehrlichia chaffeensis str. Wakulla 1249656 leaf 1174357 15 0 0 Burkholderia pseudomallei MSHR520 1249659 leaf 7450511 3 1 0 Burkholderia thailandensis 2002721643 1249660 leaf 6722801 2 0 0 Burkholderia thailandensis MSMB121 1249661 leaf 6731379 17 0 0 Burkholderia thailandensis E444 1249662 leaf 6651696 3 1 0 Burkholderia thailandensis H0587 1249663 leaf 6768375 2 0 0 Burkholderia thailandensis 34 1249664 leaf 7120198 3 1 0 Burkholderia thailandensis E254 1249665 leaf 6676730 11 1 0 Burkholderia thailandensis USAMRU Malaysia #20 1249667 leaf 6684359 4 2 1.57E-10 Burkholderia ubonensis MSMB22 1249668 leaf 7189071 5 1 0 Burkholderia thailandensis MSMB59 1250339 leaf 6739500 4 1 0 Sorangium cellulosum So0157-2 1254432 leaf 14782125 25 16 0 Bifidobacterium thermophilum RBL67 1254439 leaf 2291643 5 5 0 Thioalkalivibrio nitratireducens DSM 14787 1255043 leaf 4002350 14 11 0 Flammeovirgaceae bacterium 311 1257021 species 6665617 86 76 0 Pseudomonas sp. FGI182 1259844 species 5891312 18 9 0 Spiribacter salinus M19-40 1260251 leaf 1739487 1 1 0 Mannheimia haemolytica D153 1261126 leaf 2681844 11 0 0 Citrobacter amalonaticus Y19 1261127 leaf 5875351 6 3 0 Bacillus thuringiensis serovar kurstaki str. HD-1 1261129 leaf 6766594 9 0 0 Candidatus Liberibacter americanus str. Sao Paulo 1261131 leaf 1195201 22 21 0 Xanthomonas translucens pv. translucens DSM 18974 1261556 leaf 4715357 29 9 0 Enterococcus faecalis str. Symbioflor 1 1261557 leaf 2810675 22 3 0 Clostridium pasteurianum DSM 525 = ATCC 6013 1262449 leaf 13056846 342 0 0 Streptomyces sp. 769 1262452 species 10338286 58 47 0 Yersinia enterocolitica (type O:5) str. YE53/03 1262462 leaf 4940199 18 2 0 Herbaspirillum hiltneri N3 1262470 leaf 4965474 17 8 0 Leuconostoc phage phiLN03 1262515 species 26752 1 0 0 Leuconostoc phage phiLN12 1262517 species 28193 1 0 0 Leuconostoc phage phiLN6B 1262520 species 25740 4 0 0 Leuconostoc phage P793 1262522 species 26769 1 0 0 Lactococcus phage 340 1262533 species 32337 1 0 0 Lactococcus phage P680 1262537 species 29631 1 0 0 Lactococcus phage phi7 1262538 species 32382 1 1 0 Vibrio phage VH7D 1262539 species 246964 1 1 0 Edwardsiella piscicida 1263550 species 3857040 11 0 0 Bibersteinia trehalosi USDA-ARS-USMARC-188 1263829 leaf 2340975 31 1 0 Bibersteinia trehalosi USDA-ARS-USMARC-189 1263831 leaf 2454127 30 0 0 Bibersteinia trehalosi USDA-ARS-USMARC-190 1263832 leaf 2443169 19 3 0 Ferret coronavirus 1264898 species 28434 2 2 0 Ruegeria mobilis F1926 1265309 leaf 4830028 29 23 0 Buchnera aphidicola (Aphis glycines) 1265350 leaf 638851 47 21 0 Streptomyces sp. PAMC 26508 1265601 species 7630245 9 2 0 Bordetella holmesii F627 1266729 leaf 3701221 5 0 0 Proteus mirabilis BB2000 1266738 leaf 3846754 63 5 0 Acetobacter pasteurianus 386B 1266844 leaf 3078647 6 2 0 Carnobacterium inhibens subsp. gilichinskyi 1266845 subspecies 2497115 35 31 0 Brachyspira hyodysenteriae ATCC 27164 1266923 leaf 3074045 121 7 0 Nitrosospira briensis C-128 1266925 leaf 3210113 5 5 0 Mycoplasma hominis ATCC 27545 1267000 leaf 715165 46 4 0 Mycoplasma synoviae ATCC 25204 1267001 leaf 846495 67 6 0 Frischella perrara 1267021 species 2692351 54 50 0 Cupriavidus gilardii CR3 1267562 leaf 5578743 15 1 3.77E-10 Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 1267577 leaf 821813 14 4 0 Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 1267753 leaf 4675267 3 3 0 Corynebacterium urealyticum DSM 7111 1267754 leaf 2316065 1 1 0 Altererythrobacter atlanticus 1267766 species 3475106 12 3 0 Paenibacillus sabinae T27 1268072 leaf 5270569 16 13 0 Legionella oakridgensis ATCC 33761 = DSM 21215 1268635 leaf 2773209 21 21 0 Acanthamoeba polyphaga moumouvirus 1269028 leaf 1021348 36 36 0 Riemerella anatipestifer RA-CH-2 1271752 leaf 2166321 35 0 0 Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 1271862 leaf 5089224 1 0 0 Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 1271863 leaf 5267011 4 2 0 Liberibacter crescens 1273132 species 1504659 54 0 0 Campylobacter coli CVM N29710 1273173 leaf 1732055 6 2 0 Campylobacter fetus subsp. venerealis cfvi03/293 1273266 leaf 1996729 21 2 0 Pyrodictium delaneyi 1273541 species 2023836 2 2 0 Mycobacterium sp. VKM Ac-1817D 1273687 species 6324222 8 2 0 Staphylococcus phage JS01 1273712 species 43458 8 0 0 Escherichia phage PBECO 4 1273738 species 348113 5 5 0 Bacillus virus Curly 1273740 species 49425 1 1 0 Bradyrhizobium icense 1274631 species 8322773 13 10 0 Eidolon polyomavirus 1 1276187 species 5294 1 1 0 Spiroplasma taiwanense CT-1 1276220 leaf 1086278 41 36 0 Spiroplasma diminutum CUAS-1 1276221 leaf 945296 362 361 0 Spiroplasma chrysopicola DF-1 1276227 leaf 1123322 32 22 0 Spiroplasma syrphidicola EA-1 1276229 leaf 1107344 21 11 0 Spiroplasma culicicola AES-1 1276246 leaf 1175131 59 54 0 Spiroplasma sabaudiense Ar-1343 1276257 leaf 1075953 59 53 0 Spiroplasma apis B31 1276258 leaf 1160554 39 38 0 Staphylococcus pasteuri SP1 1276282 leaf 2559946 120 91 0 Streptococcus suis TL13 1276647 leaf 2038146 13 3 0 Candidatus Liberibacter africanus PTSAPSY 1277257 leaf 1192232 40 25 0 Bacillus phage BPS10C 1277886 species 159590 1 0 0 Myxococcus stipitatus DSM 14675 1278073 leaf 10350586 22 18 0 Cyanophage S-RIM32 1278479 species 194437 2 2 0 Pseudomonas aeruginosa PA1R 1279008 leaf 6309305 3 0 0 Bacillus thuringiensis serovar kurstaki str. HD73 1279365 leaf 5908575 4 0 0 Leptospira interrogans serovar Hardjo str. Norma 1279460 leaf 4762150 37 3 0 Synechococcus sp. KORDI-100 1280380 species 2789000 27 13 0 Pseudomonas aeruginosa B136-33 1280938 leaf 6421010 3 1 0 Bordetella holmesii H558 1281885 leaf 3696428 5 0 0 Pseudomonas poae RE*1-1-14 1282356 leaf 5512241 13 9 0 Shigella flexneri 2003036 1282357 leaf 4595814 1 1 0 Vibrio phage JA-1 1283071 species 69278 2 2 0 Pelagibacter phage HTVC008M 1283076 species 147284 7 7 0 Pelagibacter phage HTVC011P 1283078 species 39921 3 3 0 Pseudomonas sp. URMO17WK12:I11 1283291 species 11209782 22 19 0 Azotobacter vinelandii CA 1283330 leaf 5366370 15 0 0 Azotobacter vinelandii CA6 1283331 leaf 5323210 15 0 0 Lactobacillus plantarum ZJ316 1284663 leaf 3299755 3 1 0 Klebsiella pneumoniae DMC1097 1284798 leaf 5710688 2 0 0 Corynebacterium casei LMG S-19264 1285583 leaf 3132213 5 4 0 Nile crocodilepox virus 1285600 species 190054 3 3 0 Raoultella ornithinolytica B6 1286170 leaf 5398151 12 1 0 Peptoclostridium acidaminophilum DSM 3953 1286171 leaf 3055036 12 11 0 Vervet monkey polyomavirus 2 1286217 species 5167 3 3 0 Bacillus thuringiensis serovar thuringiensis str. IS5056 1286404 leaf 6771593 13 4 0 Neorickettsia helminthoeca str. Oregon 1286528 leaf 884232 6 5 0 Sinorhizobium meliloti 2011 1286640 leaf 6693185 9 0 0 Enterococcus faecalis DENG1 1287066 leaf 2961043 8 0 0 Edwardsiella piscicida C07-087 1288122 leaf 3857040 14 1 0 Listeria monocytogenes 6179 1288295 leaf 3072826 11 1 0 Gluconobacter oxydans DSM 3504 1288313 leaf 2882437 1 1 0 Aeromonas hydrophila ML09-119 1288394 leaf 5024500 17 0 0 Magnetospira sp. QH-2 1288970 species 4052370 20 5 0 Rhodococcus erythropolis R138 1289591 leaf 6806506 2 2 0 Rickettsia prowazekii str. NMRC Madrid E 1290427 leaf 1111520 27 0 0 Rickettsia prowazekii str. Breinl 1290428 leaf 1109301 27 0 0 Treponema pedis str. T A4 1291379 leaf 2889325 67 65 0 Lactobacillus hokkaidonensis JCM 18461 1291742 leaf 2400586 15 13 0 Mycoplasma putrefaciens Mput9231 1292033 leaf 859996 30 13 0 Bacillus amyloliquefaciens KHG19 1292358 leaf 3953361 24 22 0 Coxiella burnetii Z3055 1293501 leaf 1995457 9 1 0 Choristoneura rosaceana entomopoxvirus 'L' 1293539 species 282895 10 5 0 Adoxophyes honmai entomopoxvirus 'L' 1293540 species 228750 4 3 0 Mythimna separata entomopoxvirus 'L' 1293572 species 281182 3 2 0 Pseudomonas denitrificans ATCC 13867 1294143 leaf 5696307 11 4 0 Roseibacterium elongatum DSM 19469 1294273 leaf 3555109 9 8 2.63E-10 Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1295009 leaf 1931651 41 40 0 Campylobacter jejuni subsp. jejuni R14 1295010 leaf 1795858 6 1 0 Haemophilus influenzae CGSHiCZ412602 1295140 leaf 1811802 8 3 0 Croceicoccus 1295327 genus 0 3 0 0 Photobacterium gaetbulicola 1295392 species 5909413 1 0 0 Lactococcus lactis subsp. cremoris KW2 1295826 leaf 2427048 23 2 0 Enterobacter xiangfangensis 1296536 species 4661849 14 0 0 Brevibacillus phage Jimmer1 1296659 species 54312 2 2 0 Komagataeibacter xylinus E25 1296990 leaf 3905082 10 10 0 Intestinimonas butyriciproducens 1297617 species 3376475 22 7 0 Myxococcus hansupus 1297742 species 9490432 13 10 0 Thalassolituus oleivorans MIL-1 1298593 leaf 3920328 19 12 0 Thermosulfidibacter takaii ABI70S6 1298851 leaf 1816670 25 23 0 Mycobacterium kansasii 824 1299328 leaf 6402301 10 1 0 Mycobacterium avium subsp. avium 2285 (S) 1299329 leaf 5197664 4 0 0 Mycobacterium avium subsp. avium 2285 (R) 1299330 leaf 5169415 4 0 0 Mycobacterium intracellulare 1956 1299331 leaf 5183048 1 0 0 Enterococcus mundtii QU 25 1300150 leaf 3351060 25 25 0 Lactobacillus plantarum DOMLa 1300221 leaf 3210111 10 0 0 Bifidobacterium longum subsp. longum GT15 1300227 leaf 2337521 2 2 0 Alteromonas mediterranea MED64 1300254 leaf 4397537 22 11 0 Alteromonas mediterranea U7 1300256 leaf 4442936 23 0 0 Alteromonas mediterranea U8 1300257 leaf 4395035 25 1 0 Alteromonas mediterranea UM7 1300258 leaf 4931660 16 0 0 Alteromonas mediterranea UM4b 1300259 leaf 4438767 16 0 0 Dokdonella koreensis DS-123 1300342 leaf 4446619 5 2 0 Dokdonia donghaensis DSW-1 1300343 leaf 3293944 27 12 0 Isoptericola dokdonensis DS-3 1300344 leaf 3826972 144 134 0 Nocardioides dokdonensis FR1436 1300347 leaf 4376707 17 11 1.07E-10 Mucilaginibacter sp. PAMC 26640 1300914 species 5618021 79 73 0 Pseudomonas knackmussii B13 1301098 leaf 6162905 75 71 0 Invertebrate iridovirus 22 1301279 species 197693 5 0 0 Invertebrate iridovirus 25 1301280 species 204815 6 4 0 Methanocaldococcus bathoardescens 1301915 species 1607556 63 42 0 Bacillus subtilis subsp. subtilis str. BAB-1 1302650 leaf 4021944 4 0 0 Planococcus sp. L10.15 1302659 species 3330075 98 89 0 Borrelia miyamotoi LB-2001 1302858 leaf 937966 33 0 0 Streptococcus cristatus AS 1.3089 1302863 leaf 2142100 35 35 0 Mycobacterium abscessus subsp. bolletii 50594 1303024 leaf 5270527 7 1 0 Streptomyces fulvissimus DSM 40593 1303692 leaf 7905758 17 11 0 endosymbiont of Bathymodiolus septemdierum str. Myojin knoll 1303921 leaf 1469434 26 26 0 Pasteurella multocida subsp. multocida OH4807 1304873 leaf 2079121 11 10 0 Pasteurella multocida OH1905 1304890 leaf 2271688 5 2 0 Xanthomonas axonopodis Xac29-1 1304892 leaf 5296525 9 0 0 Enterococcus faecium Aus0085 1305849 leaf 3239275 13 2 0 Mycobacterium tuberculosis str. Beijing/NITR203 1306400 leaf 4411128 2 0 0 Burkholderia pseudomallei MSHR5858 1306417 leaf 7072128 1 1 0 Burkholderia pseudomallei HBPUB10134a 1306418 leaf 7218403 1 0 0 Burkholderia pseudomallei HBPUB10303a 1306419 leaf 7178176 12 0 0 Burkholderia pseudomallei MSHR5848 1306420 leaf 7290434 1 0 0 Burkholderia pseudomallei MSHR5855 1306421 leaf 7297804 1 0 0 Flavobacterium sp. PK15 1306519 species 3851214 61 54 4.93E-18 Fusobacterium nucleatum subsp. nucleatum ChDC F316 1307428 leaf 2227266 60 19 0 Fusobacterium hwasookii ChDC F174 1307442 leaf 2531722 106 23 0 Fusobacterium hwasookii ChDC F206 1307443 leaf 2430523 102 18 0 Fusobacterium hwasookii ChDC F300 1307444 leaf 2527063 94 42 0 Salinispira pacifica 1307761 species 3782798 38 29 0 Tannerella forsythia 3313 1307832 leaf 3350939 56 6 0 Tannerella forsythia KS16 1307833 leaf 3393002 18 6 0 bacterium L21-Spi-D4 1307839 species 4812386 191 186 0 Maruca vitrata nucleopolyhedrovirus 1307954 species 111953 4 4 0 Leucania separata nucleopolyhedrovirus 1307956 species 168041 2 0 0 Xanthomonas citri subsp. citri UI6 1308548 leaf 5222433 2 2 0 Bacillus phage vB_BanS-Tsamsa 1308863 species 168876 5 5 0 'Deinococcus soli' Cha et al. 2014 1309411 species 3236984 8 8 0 Bacillus phage MG-B1 1309583 species 27190 1 1 0 Streptococcus agalactiae 09mas018883 1309806 leaf 2138694 1 0 0 Streptococcus agalactiae ILRI005 1309807 leaf 2109759 2 2 0 Helicobacter pylori UM032 1311573 leaf 1593537 6 0 0 Escherichia coli ACN001 1311757 leaf 4936576 2 0 0 Mannheimia haemolytica D171 1311759 leaf 2501382 12 0 0 Mannheimia haemolytica D174 1311760 leaf 2702201 8 0 0 Legionella pneumophila subsp. pneumophila LPE509 1312904 leaf 3507714 23 6 0 Ilumatobacter coccineus YM16-304 1313172 leaf 4830181 3 2 0 Erysipelothrix rhusiopathiae SY1027 1313290 leaf 1752910 22 3 0 Lactobacillus acidophilus La-14 1314884 leaf 1991579 36 0 0 Pseudoalteromonas translucida KMM 520 1315283 leaf 4147593 74 25 0 Sphingobium sp. TKS 1315974 species 6228879 41 33 0 Blattabacterium sp. (Nauphoeta cinerea) 1316444 species 626626 20 17 0 Mycoplasma bovis CQ-W70 1316930 leaf 948516 3 0 0 Mannheimia haemolytica M42548 1316932 leaf 2731870 5 1 0 Lactobacillus rhamnosus LOCK900 1316933 leaf 2883376 8 1 0 Acholeplasma palmae J233 1318466 leaf 1554229 44 43 0 Lactobacillus rhamnosus LOCK908 1318634 leaf 2990900 9 0 0 Lactobacillus casei LOCK919 1318635 leaf 3143369 12 9 0 Bartonella ancashensis 1318743 species 1467695 43 41 0 Idiomarina loihiensis GSL 199 1321370 leaf 2839759 7 0 0 Helicobacter pylori UM299 1321938 leaf 1594569 6 0 0 Helicobacter pylori UM037 1321939 leaf 1692794 43 22 0 Helicobacter pylori UM066 1321940 leaf 1658047 1 0 0 Helicobacter pylori UM298 1321941 leaf 1594544 6 0 0 Escherichia coli ATCC 25922 1322345 leaf 5203440 5 1 0 White clover cryptic virus 2 1323525 species 4783 4 4 0 Staphylococcus aureus CA-347 1323661 leaf 2875156 3 0 0 Paraburkholderia caribensis MBA4 1323664 leaf 9482704 6 5 0 Acinetobacter equi 1324350 species 3054269 103 55 0 Chryseobacterium gallinarum 1324352 species 4633632 122 94 0 Pseudomonas syringae pv. syringae B301D 1324931 leaf 6094819 10 2 0 Pseudomonas syringae pv. syringae HS191 1324932 leaf 6002759 32 13 0 Flavobacterium phage 6H 1325731 species 46978 1 0 0 Mycobacterium phage PegLeg 1325953 species 80955 5 5 0 Mycobacterium phage Jobu08 1327772 species 50679 3 3 0 Cronobacter phage CR8 1327934 leaf 149162 1 0 0 Cellulophaga phage phi19:1 1327970 species 57447 8 8 0 Cellulophaga phage phi17:2 1327972 species 145343 3 1 0 Cellulophaga phage phi38:1 1327977 species 72534 1 0 0 Cellulophaga phage phi18:1 1327982 species 39189 2 2 0 Lactobacillus plantarum 16 1327988 leaf 3361015 2 2 0 Serratia sp. FS14 1327989 species 5249875 13 0 0 Cellulophaga phage phi4:1 1328029 species 145865 2 0 0 Cellulophaga phage phi13:2 1328030 species 72369 1 1 0 Rhizobium etli bv. mimosae str. Mim1 1328306 leaf 7197998 101 40 0 Borrelia burgdorferi CA382 1328311 leaf 910736 50 0 0 Azotobacter chroococcum NCIMB 8003 1328314 leaf 5192286 89 14 0 Klebsiella pneumoniae subsp. pneumoniae KPNIH27 1328324 leaf 6132443 3 3 0 Escherichia coli APEC IMT5155 1329907 leaf 5126057 1 0 0 Borrelia hermsii CC1 1329908 leaf 922280 28 0 0 Bacillus bombysepticus str. Wang 1330043 leaf 5873592 84 4 0 Kosmotoga pacifica 1330330 species 2169170 25 25 0 Bordetella pseudohinzii 1331258 species 4558891 8 4 0 Pseudomonas putida H8234 1331671 leaf 6870827 9 8 0 Pseudomonas syringae UMAF0158 1332075 leaf 5850990 39 6 0 Sphingobium baderi 1332080 species 4583422 14 10 6.98E-10 Salinarchaeum sp. Harcht-Bsk1 1333523 species 3255260 2 1 0 Paenibacillus durus ATCC 35681 1333534 leaf 5575484 20 15 0 Bacillus amyloliquefaciens UMAF6639 1333538 leaf 4034636 4 2 0 Citrobacter freundii CFNIH1 1333848 leaf 5371331 26 16 0 Enterobacter cloacae ECR091 1333849 leaf 4959888 15 0 0 Enterobacter cloacae ECNIH2 1333850 leaf 5502685 8 0 0 Enterobacter cloacae ECNIH3 1333851 leaf 5061388 15 0 0 Klebsiella oxytoca KONIH1 1333852 leaf 6684898 9 1 0 Haemophilus influenzae KR494 1334187 leaf 1856176 25 14 0 Serratia marcescens SM39 1334564 leaf 5326023 5 3 0 Myxococcus fulvus 124B02 1334629 leaf 11048835 24 19 0 Pseudomonas fluorescens PICF7 1334632 leaf 6136735 13 3 0 Defluviimonas alba 1335048 species 4987611 11 7 0 Burkholderia pseudomallei MSHR305 1335307 leaf 7428072 1 0 0 Spiribacter sp. UAH-SP71 1335757 species 1926631 1 1 0 Formosa sp. Hel1_33_131 1336794 species 2735158 49 48 0 Formosa sp. Hel3_A1_48 1336795 species 2016454 41 38 0 Calothrix sp. 336/3 1337936 species 6420126 91 81 0 Elizabethkingia anophelis NUHP1 1338011 leaf 4369828 55 41 0 Vibrio parahaemolyticus O1:K33 str. CDC_K4557 1338032 leaf 5138575 20 3 0 Vibrio parahaemolyticus O1:Kuk str. FDA_R31 1338034 leaf 5223562 11 7 0 Campylobacter jejuni 32488 1338035 leaf 1702398 2 1 0 Bacillus velezensis UCMB5033 1338518 leaf 4071167 4 0 0 Pseudomonas sp. JY-Q 1338689 species 6178825 7 3 0 Pasteurella multocida subsp. multocida HB01 1339255 leaf 2416068 6 0 0 Geobacter anodireducens 1340425 species 3666014 5 5 0 Lactobacillus reuteri I5007 1340495 leaf 2093275 13 1 0 Escherichia phage JH2 1340750 species 87712 3 0 0 Synechococcus phage ACG-2014h 1340810 species 189311 5 5 0 Synechococcus phage S-MbCM100 1340812 species 170438 4 1 0 Mycobacterium phage LittleCherry 1340818 species 50690 1 0 0 Mycobacterium phage KayaCho 1340830 species 70838 1 1 0 Campylobacter jejuni subsp. jejuni str. RM3420 1340842 leaf 1666780 3 0 0 Streptococcus suis T15 1340847 leaf 2240234 2 1 0 Vibrio phage VPUSM 8 1341101 species 34145 2 0 0 Clostridium autoethanogenum DSM 10061 1341692 leaf 8704651 301 1 0 Bifidobacterium indicum LMG 11587 = DSM 20214 1341694 leaf 1734546 7 0 0 Staphylococcus aureus subsp. aureus ST772-MRSA-V 1343064 leaf 2860508 2 1 0 Palaeococcus pacificus DY20341 1343739 leaf 1859370 19 13 0 Enterococcus faecium T110 1344042 leaf 2737963 45 16 0 American bat vesiculovirus TFFN-2013 1344113 species 10692 31 15 0 Archaeoglobus fulgidus DSM 8774 1344584 leaf 2316287 15 4 0 Clostridium saccharobutylicum DSM 13864 1345695 leaf 5107814 181 162 0 [Clostridium] stercorarium subsp. leptospartum DSM 9219 1346611 leaf 3148357 45 15 0 Serratia liquefaciens ATCC 27592 1346614 leaf 5282719 15 6 0 Campylobacter jejuni 4031 1347340 leaf 1669329 3 0 0 Pseudoalteromonas sp. OCN003 1348114 species 4815987 29 27 0 Cellulophaga baltica 18 1348584 leaf 4635105 92 52 0 Cellulophaga baltica NN016038 1348585 leaf 4560540 61 17 0 Bacillus megaterium NBRC 15308 = ATCC 14581 1348623 leaf 5746640 90 44 0 Serratia plymuthica S13 1348660 leaf 5467306 12 6 0 Corynebacterium argentoratense DSM 44202 1348662 leaf 2031902 7 6 0 Croceicoccus naphthovorans 1348774 species 3863562 15 8 6.39E-19 Pandoravirus dulcis 1349409 species 1908524 13 7 0 Pandoravirus salinus 1349410 species 2473870 24 19 0 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 1349767 leaf 5949001 23 9 1.76E-10 Aureimonas sp. AU20 1349819 species 5210858 7 3 0 Campylobacter jejuni subsp. jejuni M129 1349827 leaf 1801315 4 0 0 Synechococcus sp. UTEX 2973 1350461 species 2744626 3 0 0 Sulfolobus monocaudavirus SMV1 1351702 species 48775 2 2 0 Helicobacter pylori SouthAfrica20 1352356 leaf 1622903 26 3 0 Elizabethkingia anophelis FMS-007 1352940 leaf 3938967 49 25 0 Streptococcus anginosus subsp. whileyi MAS624 1353243 leaf 2122284 54 21 0 Enterobacter cloacae P101 1354030 leaf 5369929 19 6 0 Riemerella anatipestifer CH3 1354240 leaf 2234477 46 2 0 Mycobacterium vaccae 95051 1354275 leaf 6235754 7 7 0 Aeromonas hydrophila 4AK4 1354302 leaf 4527993 131 16 0 Xenorhabdus poinarii G6 1354304 leaf 3659523 46 21 0 Bradyrhizobium diazoefficiens 1355477 species 18211892 11 2 0 Hymenobacter sp. APR13 1356852 species 5010594 36 35 0 Pseudomonas syringae CC1557 1357279 leaf 5811653 14 6 0 Caulobacter phage Cr30 1357714 species 155997 4 4 0 Lactobacillus reuteri TD1 1358027 leaf 2145445 13 7 0 Campylobacter coli 15-537360 1358410 leaf 1685020 24 3 0 Escherichia coli PCN061 1358422 leaf 4901825 1 1 0 Thermofilum sp. 1910b 1365176 species 1750259 37 4 0 Klebsiella pneumoniae KP-1 1365186 leaf 5375667 4 1 0 Ralstonia pickettii DTP0602 1366050 leaf 8125850 58 23 0 Mannheimia haemolytica USMARC_2286 1366053 leaf 2658507 4 0 0 Bacillus infantis NRRL B-14911 1367477 leaf 4884713 1732 1698 0 Paracoccus aminophilus JCM 7686 1367847 leaf 4873118 17 5 0 Brazoran virus 1368616 species 13242 1 1 0 Acinetobacter baumannii DU202 1370126 leaf 4178958 1 0 0 Dyella jiangningensis 1379159 species 5396991 7 6 0 Bacteroides ovatus V975 1379690 leaf 6475296 78 0 0 Circoviridae 2 LDMD-2013 1379695 species 3584 16 9 0 Methanobacterium sp. MB1 1379702 species 2029766 36 29 0 Spirosoma radiotolerans 1379870 species 7029352 23 22 6.64E-11 Rufibacter sp. DG15C 1379909 species 4143738 65 60 0 Rufibacter sp. DG31D 1379910 species 4820793 46 34 0 Staphylococcus aureus subsp. aureus Tager 104 1381115 leaf 2820837 20 10 0 Lactobacillus fermentum 3872 1381124 leaf 2330492 2 1 0 Candidatus Profftella 1381133 genus 0 2 0 0 Salmonella bongori serovar 48:z41:-- str. RKS3044 1382510 leaf 4394500 13 1 0 Helicobacter pylori oki102 1382920 leaf 1633212 4 0 0 Helicobacter pylori oki112 1382921 leaf 1637925 5 0 0 Helicobacter pylori oki128 1382922 leaf 1553826 8 7 0 Helicobacter pylori oki154 1382923 leaf 1599700 2 0 0 Helicobacter pylori oki422 1382924 leaf 1634852 10 1 0 Helicobacter pylori oki828 1382926 leaf 1600345 1 0 0 Helicobacter pylori oki898 1382927 leaf 1634875 7 0 0 Pseudomonas putida S13.1.2 1384061 leaf 6621848 25 13 0 Methyloceanibacter caenitepidi 1384459 species 3424964 4 2 0 Adlercreutzia equolifaciens DSM 19450 1384484 leaf 2862526 2 2 0 Hymenobacter sp. DG25A 1385663 species 3777136 28 23 0 Hymenobacter sp. DG25B 1385664 species 4360029 10 3 0 Bacillus velezensis NAU-B3 1385727 leaf 4204608 17 0 0 Melissococcus plutonius S1 1385937 leaf 2073864 85 46 0 Bifidobacterium breve JCM 7017 1385939 leaf 2288919 4 0 0 Bifidobacterium breve JCM 7019 1385940 leaf 2359009 1 0 0 Bifidobacterium breve NCFB 2258 1385941 leaf 2315904 2 0 0 Bifidobacterium breve 689b 1385942 leaf 2331707 1 0 0 Neisseria meningitidis LNP21362 1386087 leaf 2139957 1 0 0 Salmonella enterica subsp. arizonae serovar 62:z36:- str. RKS2983 1386967 leaf 4574846 17 3 0 Francisella tularensis subsp. novicida PA10-7858 1386968 leaf 1978958 6 2 0 Campylobacter lari NCTC 11845 1388749 leaf 1791508 89 63 0 Campylobacter lari CCUG 22395 1388750 leaf 1523028 21 4 0 Campylobacter subantarcticus LMG 24374 1388751 leaf 1782536 56 4 0 Campylobacter subantarcticus LMG 24377 1388752 leaf 1852995 53 1 0 Campylobacter peloridis LMG 23910 1388753 leaf 1762793 47 38 0 Dehalococcoides mccartyi GY50 1388758 leaf 1407418 8 1 0 Pseudomonas mosselii SJ10 1388763 leaf 6247860 12 4 0 Cupriavidus sp. USMAHM13 1389192 species 7820821 26 5 0 Leifsonia xyli subsp. cynodontis DSM 46306 1389489 leaf 2686418 2 1 0 Faeces associated gemycircularvirus 11 1391026 species 2159 3 1 0 Escherichia phage 4MG 1391428 leaf 148567 7 1 0 Mycobacterium phage Conspiracy 1391431 species 50755 1 0 0 Vulgatibacter incomptus 1391653 species 4350553 10 8 0 Comamonas testosteroni TK102 1392005 leaf 6062703 44 24 2.44E-10 Staphylococcus aureus subsp. aureus 6850 1392476 leaf 2736560 3 0 0 Klebsiella pneumoniae subsp. pneumoniae 1158 1392499 leaf 5341039 2 2 0 Klebsiella pneumoniae HK787 1392500 leaf 5329385 1 0 0 Anaplasma phagocytophilum str. Norway variant2 1392507 leaf 1545197 6 1 0 Bacillus anthracis str. SVA11 1392837 leaf 5487517 1 0 0 Burkholderia cepacia JBK9 1395570 leaf 8481212 21 16 0 Leptospira interrogans serovar Linhai str. 56609 1395589 leaf 4915652 42 5 0 Escherichia phage vB_EcoP_PhAPEC5 1395983 species 71248 1 0 0 Celeribacter marinus 1397108 species 3096705 12 8 0 Mycoplasma californicum HAZ160_1 1397850 leaf 799088 45 25 0 Borrelia afzelii Tom3107 1398490 leaf 987652 26 4 0 Borreliella valaisiana Tom4006 1398491 leaf 992695 30 25 0 Exiguobacterium sp. MH3 1399115 species 3164195 13 8 0 Lactococcus lactis subsp. lactis KLDS 4.0325 1399116 leaf 2595492 103 14 0 Pectobacterium phage PM1 1399915 species 55098 1 1 0 Bacteroidales bacterium CF 1400053 species 2657245 24 21 0 Acinetobacter baumannii ZW85-1 1400867 leaf 3925246 15 4 0 Pseudomonas aeruginosa VRFPA04 1400868 leaf 6818030 2 0 0 Xylella fastidiosa MUL0034 1401256 leaf 2666577 4 3 0 Xanthomonas axonopodis pv. glycines str. 8ra 1401257 leaf 5390191 8 2 0 Ornithobacterium rhinotracheale ORT-UMN 88 1401325 leaf 2397867 76 4 0 Candidatus Endolissoclinum faulkneri L5 1401328 leaf 1518636 30 27 0 Mycoplasma parvum str. Indiana 1403316 leaf 564395 41 40 0 Porphyromonas gingivalis 381 1403335 leaf 2378872 4 0 0 Porphyromonas gingivalis AJW4 1403336 leaf 2372492 3 1 0 Porphyromonas gingivalis A7A1-28 1403338 leaf 2249024 1 0 0 Streptococcus equi subsp. zooepidemicus CY 1403449 leaf 2107382 49 8 0 Streptomyces lydicus A02 1403539 leaf 9300149 54 46 1.43E-10 Corynebacterium glyciniphilum AJ 3170 1404245 leaf 3568218 2 2 0 Bacillus subtilis subsp. subtilis str. OH 131.1 1404258 leaf 4039155 2 0 0 Klebsiella pneumoniae subsp. pneumoniae PittNDM01 1406314 leaf 5812304 3 0 0 Acinetobacter phage Presley 1406780 species 77792 2 2 0 Bacillus phage CampHawk 1406783 species 146193 1 0 0 Bacillus phage Grass 1406785 species 156648 1 0 0 Bacillus phage Spock 1406791 species 164297 2 2 0 Clavibacter phage CN1A 1406793 species 56789 1 1 0 Salmonella enterica subsp. enterica serovar Agona str. 24249 1406860 leaf 4762840 29 1 0 Mesoplasma florum W37 1406864 leaf 825824 38 15 0 Pseudomonas phage TL 1406974 species 45696 1 0 0 Acinetobacter sp. TGL-Y2 1407071 species 3691287 116 108 0 Helicobacter pylori BM012A 1407462 leaf 1660425 32 0 0 Helicobacter pylori BM012S 1407463 leaf 1660469 32 0 0 Halobacterium hubeiense 1407499 species 3130345 6 6 0 Thermotoga caldifontis AZM44c09 1408159 leaf 2014912 12 10 0 Thermotoga profunda AZM34c06 1408160 leaf 2187612 15 12 0 Campylobacter jejuni subsp. jejuni F38011 1408176 leaf 1691939 6 5 0 Streptococcus thermophilus ASCC 1275 1408178 leaf 1845495 1 0 0 Lactobacillus johnsonii N6.2 1408186 leaf 1887251 23 8 0 Corynebacterium lactis RW2-5 1408189 leaf 2769745 3 3 0 Pediococcus pentosaceus SL4 1408206 leaf 1789138 24 6 0 Corynebacterium ulcerans FRC58 1408268 leaf 2542597 5 4 0 Endomicrobium proavitum 1408281 species 1588979 43 40 0 Clostridium botulinum CDC_1436 1408283 leaf 4365669 101 71 0 Candidatus Tachikawaea gelatinosa 1410383 species 708439 93 21 0 Wolbachia endosymbiont of Onchocerca volvulus str. Cameroon 1410384 leaf 960618 17 2 0 Candidatus Nitrosopelagicus brevis 1410606 species 1232128 571 387 0 Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 1410916 leaf 4768236 2 0 0 Clostridium phage CDMH1 1411095 species 54279 1 0 0 Hymenobacter sp. DG5B 1411621 species 4868852 27 26 0 Pseudomonas aeruginosa DHS01 1411700 leaf 7055752 1 0 0 Zamilon virophage 1411887 species 17276 1 1 0 Lactococcus phage phiL47 1412875 species 128546 2 0 0 Bacillus amyloliquefaciens CC178 1412898 leaf 3916828 4 0 0 Paenibacillus polymyxa SQR-21 1413214 leaf 5828436 17 6 0 Shigella phage pSb-1 1414738 species 71629 1 0 0 Bacillus amyloliquefaciens LFB112 1415165 leaf 3942754 5 0 0 Nocardia nova SH22a 1415166 leaf 8348532 16 14 0 Pseudomonas sp. TKP 1415630 species 7012672 8 1 3.48E-17 endosymbiont of Llaveia axin axin 1415657 species 309299 4 4 0 Mycoplasma ovis str. Michigan 1415773 leaf 702511 21 20 0 Clostridium botulinum 202F 1415774 leaf 3914604 130 45 0 Clostridium baratii str. Sullivan 1415775 leaf 3338630 118 108 0 Bacillus toyonensis BCT-7112 1415784 leaf 5025419 103 16 0 Klebsiella phage F19 1416011 species 43766 1 0 0 Feline sakobuvirus A 1416021 species 7807 1 0 0 Escherichia phage bV_EcoS_AHP42 1416028 species 46847 1 0 0 Escherichia phage bV_EcoS_AHS24 1416030 species 46440 1 0 0 Escherichia phage bV_EcoS_AKS96 1416031 species 45746 1 0 0 Gloeobacter kilaueensis 1416614 species 4724791 1 0 0 Pandoraea pnomenusa 3kgm 1416914 leaf 5429298 7 0 0 Aeromonas hydrophila NJ-35 1416915 leaf 5279644 14 0 0 Haloarcula hispanica N601 1417673 leaf 3901495 7 0 0 Rhizobium gallicum bv. gallicum R602 1418105 leaf 7311190 24 19 0 Aeromonas hydrophila pc104A 1418107 leaf 5023829 17 0 0 Aeromonas hydrophila AL09-71 1418110 leaf 5023861 17 0 0 Aeromonas hydrophila J-1 1419584 leaf 5000814 14 0 0 Klebsiella pneumoniae 30684/NJST258_2 1420013 leaf 5417216 1 0 0 Pseudomonas protegens Cab57 1420599 leaf 6827892 13 4 0 Marinobacter similis 1420916 species 3975896 9 8 0 Marinobacter salarius 1420917 species 4616532 26 22 0 Enterobacter asburiae L1 1421338 leaf 4561905 10 0 0 Borrelia garinii SZ 1421551 leaf 902487 20 12 0 Bacillus velezensis SQR9 1423138 leaf 4117023 18 0 0 Phaeobacter gallaeciensis DSM 26640 1423144 leaf 4540155 6 5 0 Ehrlichia muris AS145 1423892 leaf 1196717 47 23 0 Geosporobacter ferrireducens 1424294 species 5817221 111 106 0 Carrot Ch virus 2 1425362 species 8047 2 2 0 Helicobacter pylori NY40 1426844 leaf 1696917 4 1 0 Dickeya zeae EC1 1427366 leaf 4532364 15 12 0 Streptococcus agalactiae CNCTC 10/84 1427374 leaf 2013842 1 0 0 Cimodo virus 1427476 species 24835 1 1 0 Clostridium pasteurianum NRRL B-598 1428454 leaf 6186879 148 100 0 Vibrio parahaemolyticus UCM-V493 1429044 leaf 5232572 23 10 0 Paenibacillus polymyxa CR1 1429244 leaf 6019882 82 18 0 Ralstonia solanacearum OE1-1 1429399 leaf 5762975 3 1 0 Erwinia phage Ea9-2 1429767 species 75568 6 0 0 Pectobacterium bacteriophage PM2 1429794 species 170286 4 2 0 Mycobacterium phage Jovo 1429912 species 51319 1 0 0 Magnetospirillum gryphiswaldense MSR-1 v2 1430440 leaf 4365796 17 16 0 Escherichia phage vB_EcoM_JS09 1430444 leaf 169148 1 0 0 Bovine hungarovirus 1 1431464 leaf 7583 1 1 0 Rhizobium etli bv. phaseoli str. IE4803 1432049 leaf 6997434 14 2 0 Rhizobium etli bv. mimosae str. IE4771 1432050 leaf 7057405 14 1 0 Mannheimia sp. USDA-ARS-USMARC-1261 1432056 species 2393449 13 5 0 Dehalococcoides mccartyi CG1 1432059 leaf 1486678 7 0 0 Dehalococcoides mccartyi CG4 1432060 leaf 1382308 4 0 0 Francisella tularensis subsp. holarctica PHIT-FT049 1432652 leaf 1881193 1 1 0 Thermococcus guaymasensis DSM 11113 1432656 leaf 1920914 267 110 0 Enterococcus phage IME-EF4 1432658 species 40692 1 1 0 Mucinivorans hirudinis 1433126 species 3149227 29 29 0 Vibrio cholerae O1 str. KW3 1433144 leaf 4089020 3 1 0 Mannheimia varigena USDA-ARS-USMARC-1296 1433287 leaf 2245238 31 6 0 Sphingorhabdus 1434046 genus 0 3 0 0 Methanosarcina sp. Kolksee 1434099 species 4553495 52 8 0 Methanosarcina sp. MTP4 1434100 species 4211468 29 28 0 Methanosarcina sp. WH1 1434102 species 3914091 51 15 0 Methanosarcina sp. WWM596 1434103 species 4137337 62 25 0 Methanococcoides methylutens MM1 1434104 leaf 2394636 10 10 0 Methanosarcina barkeri 227 1434106 leaf 4487566 66 2 0 Methanosarcina barkeri 3 1434107 leaf 4560446 116 106 0 Methanosarcina barkeri MS 1434108 leaf 4574907 85 27 0 Methanosarcina barkeri str. Wiesmoor 1434109 leaf 4907186 87 36 0 Methanosarcina horonobensis HB-1 = JCM 15518 1434110 leaf 5018607 60 57 0 Methanosarcina lacustris Z-7289 1434111 leaf 4139808 38 26 0 Methanosarcina mazei C16 1434113 leaf 4166241 35 2 0 Methanosarcina mazei LYC 1434114 leaf 4154344 57 6 0 Methanosarcina mazei SarPi 1434115 leaf 4066551 38 12 0 Methanosarcina mazei WWM610 1434117 leaf 4096482 50 10 0 Methanosarcina siciliae C2J 1434118 leaf 5427890 63 9 0 Methanosarcina siciliae T4/M 1434120 leaf 5017558 68 16 0 Methanosarcina vacuolata Z-761 1434123 leaf 4563885 48 3 0 Mannheimia varigena USDA-ARS-USMARC-1312 1434214 leaf 2131927 38 13 0 Mannheimia varigena USDA-ARS-USMARC-1388 1434215 leaf 2228291 26 6 0 Streptomyces albulus ZPM 1434306 leaf 9784577 21 2 0 Staphylococcus phage vB_SepS_SEP9 1434319 species 92417 4 1 0 Escherichia phage HY01 1434323 species 166977 1 0 0 Bacillus amyloliquefaciens UMAF6614 1434324 leaf 4005145 8 1 0 Pseudomonas monteilii SB3078 1435044 leaf 6000087 17 0 0 Borrelia parkeri HR1 1435045 leaf 1030684 62 7 0 Trueperella pyogenes TP8 1435056 leaf 2272494 2 1 0 Pseudomonas monteilii SB3101 1435058 leaf 5945120 17 0 0 Vibrio tritonius 1435069 species 5221926 33 33 0 Rhodococcus pyridinivorans SB3094 1435356 leaf 5590512 1 0 0 Burkholderia pseudomallei TSV 48 1435365 leaf 7337621 2 1 0 Sulfolobus acidocaldarius SUSAZ 1435377 leaf 2061920 15 7 0 Escherichia phage KBNP1711 1436889 species 76184 22 19 0 Black medic leafroll virus 1436891 species 8091 5 5 0 Pea yellow stunt virus 1436892 species 7825 1 1 0 Streptococcus pyogenes STAB902 1437007 leaf 1892124 2 0 0 Streptococcus mutans UA159-FR 1437447 leaf 2031692 35 0 0 Streptomyces leeuwenhoekii 1437453 species 8122491 36 11 0 Bifidobacterium actinocoloniiforme DSM 22766 1437605 leaf 1830060 1 0 0 Xenorhabdus nematophila AN6/1 1437823 leaf 4586662 21 17 0 Castellaniella defragrans 65Phen 1437824 leaf 3952818 9 5 0 Listeria monocytogenes R479a 1437838 leaf 3031650 2 0 0 Burkholderia pseudomallei K42 1439852 leaf 7296458 9 0 0 Burkholderia pseudomallei B03 1439854 leaf 7264759 2 1 0 Burkholderia pseudomallei A79A 1439855 leaf 7272441 1 0 0 Klebsiella phage K64-1 1439894 species 346602 5 1 0 Escherichia albertii KF1 1440052 leaf 4701875 19 9 0 Escherichia coli str. Sanji 1441627 leaf 5428586 2 0 0 Leptospirillum ferriphilum YSK 1441628 leaf 2330585 2 1 0 Pseudomonas cichorii JBC1 1441629 leaf 5986012 26 6 1.57E-15 Chania multitudinisentens RB-25 1441930 leaf 5488183 44 43 0 Ectothiorhodospira sp. BSL-9 1442136 species 3550080 15 14 0 Gynuella sunshinyii YC6258 1445510 leaf 6475959 32 30 0 Mycobacterium phage MichelleMyBell 1445726 species 42240 5 0 0 Bacillus phage Bp8p-T 1445811 species 151417 1 1 0 Escherichia phage vB_EcoS_FFH1 1446489 species 108483 12 0 0 Lactobacillus paracasei N1115 1446494 leaf 3064279 29 2 0 Bacillus sp. Pc3 1446792 species 3982168 98 1 0 Bifidobacterium kashiwanohense PV20-2 1447716 leaf 2370978 5 4 0 Aeromonas hydrophila YL17 1448139 leaf 4796281 67 7 0 Streptococcus phage K13 1448274 species 39360 1 0 0 Streptococcus phage IC1 1448276 species 39965 1 0 0 Bacillus velezensis TrigoCor1448 1449088 leaf 3957904 70 53 0 Staphylococcus epidermidis PM221 1449752 leaf 2597508 42 11 0 Kutzneria albida DSM 43870 1449976 leaf 9874926 20 16 0 Burkholderia vietnamiensis LMG 10929 1449978 leaf 6930496 2 1 0 Francisella tularensis subsp. novicida D9876 1450527 leaf 1870206 6 5 0 Pithovirus sibericum 1450746 species 610033 30 28 0 Aneurinibacillus sp. XH2 1450761 species 3664835 38 32 7.07E-18 Corynebacterium falsenii DSM 44353 1451189 leaf 2719616 51 41 0 Felis catus gammaherpesvirus 1 1452540 species 122522 2 2 0 Bacillus megaterium Q3 1452722 leaf 5229799 72 36 0 Flavobacterium psychrophilum FPG3 1452724 leaf 2715909 34 10 0 Flavobacterium psychrophilum FPG101 1452725 leaf 2835130 23 0 0 Francisella tularensis subsp. novicida F6168 1452728 leaf 1927240 4 0 0 Bacillus thuringiensis HD1002 1452729 leaf 6572702 71 21 0 Sediminicola sp. YIK13 1453352 species 3569807 58 44 0 Candidatus Atelocyanobacterium thalassa isolate ALOHA 1453429 leaf 1443806 72 40 0 Yersinia aldovae 670-83 1453495 leaf 4471090 54 27 0 Hafnia alvei FB1 1453496 leaf 4712721 50 34 0 Campylobacter lari RM16712 1453988 leaf 1565009 21 10 0 Campylobacter lari RM16701 1453989 leaf 1516455 35 3 0 Bacillus subtilis HJ5 1453990 leaf 4012933 4 0 0 Siansivirga zeaxanthinifaciens CC-SAMT-1 1454006 leaf 3303986 74 74 0 Yersinia frederiksenii Y225 1454377 leaf 4550894 50 10 0 Bacillus cereus D17 1454382 leaf 5590358 69 19 0 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1728 1454589 leaf 4783492 4 4 0 Salmonella enterica subsp. enterica serovar Anatum str. CDC 06-0532 1454592 leaf 4667736 1 0 0 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1765 1454593 leaf 4955431 1 0 0 Salmonella enterica subsp. enterica serovar Montevideo str. USDA-ARS-USMARC-1903 1454603 leaf 4565462 2 2 0 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 1454627 leaf 4790387 1 0 0 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 1454638 leaf 5010089 2 2 0 Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2010K-1587 1454641 leaf 5008298 1 0 0 Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1810 1454647 leaf 4927870 2 0 0 Riemerella anatipestifer Yb2 1455062 leaf 2184066 61 0 0 Enterobacter phage PG7 1455074 leaf 173276 2 1 0 Acinetobacter baumannii LAC-4 1455315 leaf 3968436 31 4 0 Pasteurella multocida subsp. multocida PMTB2.1 1455592 leaf 2315202 2 2 0 Listeria ivanovii WSLC3009 1457190 leaf 2919538 53 0 0 Bacillus velezensis NJN-6 1458206 leaf 4052546 2 0 0 Staphylococcus aureus USA300-ISMMS1 1458279 leaf 2951201 1 0 0 Octadecabacter temperatus 1458307 species 3264628 8 8 0 Comamonadaceae bacterium A1 1458425 species 2574013 32 27 0 Comamonadaceae bacterium B1 1458426 species 2623236 20 16 0 Megasphaera elsdenii 14-14 1458465 leaf 2504349 10 9 0 Xanthomonas oryzae pv. oryzae PXO86 1458476 leaf 5016623 4 0 0 Myroides sp. ZB35 1458492 species 4065010 89 13 0 Pseudomonas phage phiPsa374 1458843 species 97906 1 1 0 Enterobacteria phage Bp4 1458848 species 72583 1 1 0 Listeria phage LP-030-3 1458852 species 41156 3 0 0 Listeria phage LP-083-2 1458855 leaf 135831 1 0 0 Listeria phage LP-114 1458857 species 66676 2 1 0 Shewanella sp. phage 1/4 1458859 species 133824 2 0 0 Shewanella sp. phage 1/40 1458860 species 139004 2 0 0 Shewanella sp. phage 1/44 1458862 species 49640 1 0 0 Moorea producens PAL-8-15-08-1 1458985 leaf 9708656 104 96 0 Paenibacillus yonginensis 1462996 species 4985901 52 34 0 Klebsiella quasipneumoniae 1463165 species 5586672 17 3 0 Anopheles minimus irodovirus 1465751 species 163023 5 5 0 Burkholderia sp. 2002721687 1468409 species 7285824 35 0 0 Burkholderiales bacterium GJ-E10 1469502 species 3276549 8 4 1.46E-10 Zhongshania aliphaticivorans 1470434 species 4204359 20 20 0 Basilea 1472344 genus 1959069 2 0 0 Lentibacillus amyloliquefaciens 1472767 species 3858284 63 59 0 Mojiang virus 1474807 species 18406 1 0 0 Aureococcus anophagefferens virus 1474867 species 370920 2 1 0 Nonlabens sp. MIC269 1476901 species 2884293 66 59 0 Methylobacterium sp. C1 1479019 species 6459145 43 3 2.07E-15 Acinetobacter phage vB_AbaM_Acibel004 1481186 species 99730 2 2 0 Hymenobacter sp. PAMC 26554 1484116 species 5451254 10 8 0 Hymenobacter sp. PAMC 26628 1484118 species 5366977 37 30 0 Pantoea sp. PSNIH2 1484157 species 4967343 9 4 0 Pantoea sp. PSNIH1 1484158 species 4410683 7 5 0 Methyloceanibacter 1484898 genus 0 3 0 0 Martelella endophytica 1486262 species 4817335 10 10 0 Listeria phage LMTA-148 1486413 species 132541 1 0 0 Listeria phage LMSP-25 1486421 species 138036 1 1 0 Enterococcus phage EFC-1 1486428 species 40286 1 0 0 Bacillus phage Evoli 1486658 species 159656 1 1 0 Bacillus phage Hakuna 1486659 species 158100 1 0 0 Bacillus phage Hoody T 1486660 species 159837 1 0 0 Corynebacterium sp. ATCC 6931 1487956 species 2471920 3 2 0 Anoxybacillus sp. B2M1 1490052 species 3819480 49 23 0 Anoxybacillus sp. B7M1 1490057 species 3869056 45 15 0 Flavobacterium gilvum 1492737 species 4402594 63 54 5.42E-12 Flavisolibacter sp. LCS9 1492898 species 5940863 105 81 0 Synechococcus phage ACG-2014b 1493508 species 172688 7 5 0 Synechococcus phage ACG-2014d 1493509 species 179110 1 1 0 Synechococcus phage ACG-2014e 1493510 species 189418 8 6 0 Synechococcus phage ACG-2014f 1493511 species 228143 7 7 0 Synechococcus phage ACG-2014g 1493512 species 174885 2 0 0 Synechococcus phage ACG-2014i 1493513 species 190768 2 0 0 Synechococcus phage ACG-2014j 1493514 species 192108 1 0 0 Arthrobacter sp. PAMC 25486 1494608 species 4593579 17 17 0 methanogenic archaeon ISO4-H5 1495144 species 1937883 3 3 0 Candidatus Evansia muelleri 1495769 species 357498 19 19 0 Bacillus subtilis subsp. globigii 1496303 subspecies 4175482 58 20 0 Papaya meleira virus 1497848 species 8768 2 2 0 Staphylococcus phage SA97 1498171 species 40592 2 0 0 Bacillus phage JBP901 1498212 species 159492 1 0 0 Chromobacteriaceae 1499392 family 3960204 1 0 0 Pseudomonas sp. Os17 1500686 species 6885464 13 0 0 Pseudomonas sp. St29 1500687 species 6833117 12 2 0 Drosophila immigrans Nora virus 1500866 species 12265 1 1 0 Campylobacter sp. RM16704 1500960 species 1557536 61 52 0 Prochlorococcus sp. MIT 0604 1501268 species 1780061 37 20 0 Prochlorococcus sp. MIT 0801 1501269 species 1929203 38 29 0 Burkholderia stagnalis 1503054 species 7583807 336 12 0 Burkholderia territorii 1503055 species 6902370 3 3 2.93E-10 Bovine herpesvirus 6 1504288 species 144898 3 3 0 Halomonas sp. KO116 1504981 species 5168360 17 8 0 Staphylococcus phage 3MRA 1505026 species 41931 1 0 0 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri 1505596 species 749321 15 15 0 Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus 1505597 species 773940 87 73 0 Thermococcus eurythermalis 1505907 species 2126164 5 4 0 Crohivirus 1506581 species 7321 8 8 0 Campylobacter fetus subsp. testudinum 1507806 subspecies 1776391 51 0 0 Jeotgalibacillus malaysiensis 1508404 species 4119509 102 92 0 Candidatus Arthromitus sp. SFB-mouse-NL 1508644 species 1654902 61 4 0 Falconid herpesvirus 1 1510155 species 204054 426 43 0 Erysipelothrix sp. LV19 1514105 species 2511486 56 53 0 Sphingopyxis fribergensis 1515612 species 5202172 10 8 0 Geobacillus sp. LC300 1519377 species 3532580 37 10 0 McMurdo Ice Shelf pond-associated circular DNA virus-6 1521390 species 2549 16 15 0 Dehalococcoides sp. UCH007 1522671 species 1473548 14 1 0 Sinorhizobium phage phiLM21 1524882 species 50827 4 4 0 Staphylococcus phage MCE-2014 1524910 species 141907 19 0 0 Staphylococcus phage P108 1526408 species 140807 3 0 0 Lacimicrobium alkaliphilum 1526571 species 4378835 34 21 0 Bosea vaviloviae 1526658 species 6713548 9 7 0 Planococcus sp. PAMC 21323 1526927 species 3199864 46 46 0 Bacillus phage Bobb 1527469 leaf 160281 1 1 0 Citrobacter phage Miller 1527524 species 178171 3 0 0 Mycobacterium phage Swirley 1527534 species 49717 1 0 0 Rickettsiales bacterium Ac37b 1528098 species 1917564 33 32 0 Lawsonella clevelandensis 1528099 species 3775705 23 1 0 Feline cyclovirus 1530454 species 1773 1 1 0 Coriobacteriaceae bacterium 68-1-3 1531429 species 1967093 11 10 0 Brevundimonas sp. DS20 1532555 species 3475610 34 3 2.29E-19 Pseudomonas sp. DR 5-09 1534110 species 6427864 10 3 0 Chicken picornavirus 5 1534548 species 9591 3 3 0 Paenibacillus sp. FSL P4-0081 1536769 species 8423054 31 25 0 Paenibacillus sp. FSL R5-0345 1536770 species 6787172 285 180 0 Paenibacillus sp. FSL R5-0912 1536771 species 7718525 88 83 0 Paenibacillus sp. FSL R7-0273 1536772 species 7288921 89 70 0 Paenibacillus sp. FSL R7-0331 1536773 species 6931967 63 51 0 Paenibacillus sp. FSL H7-0357 1536774 species 7692748 36 27 0 Paenibacillus sp. FSL H7-0737 1536775 species 6765883 123 21 0 Edwardsiella phage GF-2 1537091 species 43129 1 1 0 Kumasi rhabdbovirus 1537975 species 11072 4 3 0 Methylomonas denitrificans 1538553 species 5172098 22 12 5.66E-25 Sphingobacterium sp. ML3W 1538644 species 5329010 173 165 0 Treponema sp. OMZ 838 1539298 species 2708067 20 17 0 Escherichia phage Pollock 1540097 species 68365 14 14 0 Shigella phage Shf125875 1541825 leaf 169062 2 2 0 Candidatus Izimaplasma sp. HR1 1541959 species 1878735 107 106 0 Francisella sp. CA97-1460 1542390 species 1861609 156 73 0 Prochlorococcus phage P-TIM68 1542477 species 197361 1 1 0 Salmonella phage BP12B 1543201 species 43602 1 0 0 Sedimenticola thiotaurini 1543721 species 3962284 7 6 0 Microviridae IME-16 1544364 species 5755 1 1 0 Synedrella leaf curl alphasatellite 1544378 species 1359 3 3 0 Lactobacillus sp. wkB8 1545702 species 1932531 30 29 0 Mycobacterium sp. EPa45 1545728 species 6177406 4 4 0 Tipula oleracea nudivirus 1546257 species 145704 7 7 0 Francisella sp. FSC1006 1547445 species 2015987 107 73 0 Woeseia oceani 1548547 species 4059891 3 3 0 Pseudomonas phage vB_PaeP_C2-10_Ab22 1548906 species 45808 1 0 0 Haematospirillum jordaniae 1549855 species 2467625 6 6 0 Sphingomonas taxi 1549858 species 4061902 31 19 0 Thermofilum sp. 1807-2 1550241 species 1611988 8 7 0 Brejeira virus 1552662 species 9863 1 1 0 Limnochorda pilosa 1555112 species 3817036 16 15 0 Escherichia phage 121Q 1555202 species 348532 2 2 0 Mycobacterium phage Carcharodon 1555233 species 43680 5 0 0 Escherichia phage vB_EcoM-VpaE1 1555238 species 88403 1 0 0 Streptomyces phage Jay2Jay 1556290 species 133531 8 8 0 Yellowstone Lake virophage 7 1557035 species 23193 1 0 0 Proteus phage PM 85 1560283 species 43642 1 1 0 Mycobacterium phage Murucutumbu 1560286 species 60609 1 1 0 Lactococcus phage WRP3 1560313 species 130008 6 4 0 Enterobacter sp. E20 1560339 species 4763114 12 0 0 Sphingomonas panacis 1560345 species 5322941 72 44 9.81E-11 Melbournevirus 1560514 species 369360 1 0 0 Streptomyces sp. CCM_MD2014 1561022 species 8274043 76 55 0 Curtobacterium sp. MR_MD2014 1561023 species 3443800 6 2 0 Mycobacterium sp. QIA-37 1561223 species 4855372 4 1 0 Fermentimonas caenicola 1562970 species 2808926 62 51 0 Sucra jujuba nucleopolyhedrovirus 1563660 species 135952 4 4 0 Rhodococcus sp. B7740 1564114 species 5341557 30 5 3.37E-15 Carnobacterium sp. CP1 1564681 species 2614401 47 40 0 Bacillus sp. X1(2014) 1565991 species 3422674 54 50 0 Paenibacillus sp. IHBB 10380 1566358 species 5787303 115 109 0 Salmonella phage HB-2014 1567025 species 87510 1 1 0 Escherichia phage vB_EcoM_VR20 1567027 leaf 170336 1 0 0 Escherichia phage vB_EcoM_VR25 1567028 leaf 170822 1 0 0 Escherichia phage vB_EcoM_VR26 1567029 leaf 171541 1 0 0 Mycobacterium sp. NRRL B-3805 1570328 species 5421338 19 0 0 Bacillus sp. BH072 1570330 species 4069641 30 0 0 Staphylococcus phage phiIPLA-RODI 1572703 species 142348 22 1 0 Staphylococcus phage phiIPLA-C1C 1572704 species 140961 2 2 0 Geobacillus virus E3 1572712 species 141298 5 5 0 Salmonella phage Shivani 1572715 species 120098 3 0 0 Mannheimia phage vB_MhM_587AP1 1572744 species 35764 1 1 0 Bacillus sp. YP1 1574141 species 4153566 91 10 0 Candidatus Methanoplasma termitum 1577791 species 1488669 6 6 0 Edwardsiella sp. EA181011 1578828 species 3934167 21 15 0 Halocynthiibacter arcticus 1579316 species 4376120 29 24 0 Wenzhouxiangella marina 1579979 species 3675202 11 3 0 Candidatus Nitrosopumilus adriaticus 1580092 species 1803090 28 27 0 Sulfurospirillum sp. UCH001 1581011 species 2606563 61 45 0 Candidatus Methylopumilus planktonicus 1581557 species 1356428 52 46 0 Candidatus Methylopumilus turicensis 1581680 species 1754988 29 18 2.32E-09 Clostridium phage phiCD211 1582152 species 131326 21 20 0 Clostridium phage phiCD481-1 1582153 species 32846 1 0 0 Clostridium phage phiCD505 1582154 species 49316 3 0 0 Clostridium phage phiCD506 1582155 species 33274 2 0 0 Clostridium phage phiMMP03 1582157 species 52261 3 0 0 Fusobacterium hwasookii 1583098 species 2496436 3 0 0 Myroides sp. A21 1583100 species 4155464 114 41 0 Pseudomonas cerasi 1583341 species 6345256 61 8 0 Lentzea sp. DHS C013 1586287 species 9997872 20 14 0 Yellowstone lake phycodnavirus 3 1586715 species 171454 1 1 0 Streptococcus phage M102AD 1587907 species 30664 1 0 0 Pseudomonas phage PhiCHU 1589273 species 45626 1 0 0 Vibrio phage phi 1 1589297 species 66708 4 1 0 Cyanophage P-TIM40 1589733 species 188632 2 2 0 Achromobacter phage JWF 1589748 species 81541 1 0 0 Bromus-associated circular DNA virus 2 1590155 species 2542 1 1 0 Listeria phage vB_LmoS_293 1591073 species 40759 2 2 0 Helicobacter himalayensis 1591088 species 1829936 34 34 0 Sewage-associated circular DNA virus-28 1592095 species 2496 496 322 0 Pseudoplusia includens SNPV IE 1592335 leaf 139132 1 1 0 Condylorrhiza vestigialis MNPV 1592576 species 125767 2 2 0 Haloarcula sp. CBA1115 1592728 species 4225046 10 5 0 Coxiella-like endosymbiont 1592897 species 1733840 19 18 0 Enterococcus phage EFDG1 1597976 species 147589 1 1 0 Candidatus Nitrosotenuis cloacae 1603555 species 1620156 26 26 0 Desulfuromonas soudanensis 1603606 species 3958620 16 12 0 Halanaeroarchaeum sulfurireducens 1604004 species 4463238 2 0 0 Escherichia phage ECBP2 1604355 species 77315 18 11 0 Acinetobacter phage vB_AbaM_phiAbaA1 1605379 species 104906 2 2 0 Cricetid herpesvirus 2 1605972 species 124335 1 1 0 Bole Tick Virus 3 1608042 species 11183 8 8 0 Huangpi Tick Virus 1 1608047 species 18467 1 0 0 Shayang Fly Virus 3 1608067 species 15462 1 1 0 Taishun Tick Virus 1608090 species 11280 7 7 0 Wenzhou Tick Virus 1608094 species 18291 1 1 0 Wuhan Insect virus 2 1608107 species 15458 1 1 0 Wuhan Insect virus 7 1608112 species 11165 1 1 0 Wuhan Louse Fly Virus 10 1608114 species 11541 1 1 0 Acinetobacter sp. NCu2D-2 1608473 species 3048277 207 203 0 Candidatus Filomicrobium marinum 1608628 species 7939883 25 0 0 Pyrococcus sp. NCB100 1609559 species 1977126 14 9 0 Confluentimicrobium sp. EMB200-NS6 1609966 species 4147426 10 9 0 Methanobrevibacter sp. YE315 1609968 species 2273296 60 57 0 Sphingomonas hengshuiensis 1609977 species 5228389 28 16 0 Verrucomicrobia bacterium L21-Fru-AB 1609981 species 2949723 6 3 0 Salmonella phage f18SE 1611545 species 41868 1 1 0 Pseudomonas sp. MRSN12121 1611770 species 6986763 335 3 0 Geminocystis sp. NIES-3708 1615909 species 4042078 97 73 0 Paenibacillus bovis 1616788 species 5354277 33 31 0 Geminocystis sp. NIES-3709 1617448 species 4426059 186 94 0 Shigella flexneri 4c 1617964 leaf 5196066 1 0 0 Arthrobacter sp. IHBB 11108 1618207 species 3599434 145 139 0 Erwinia gerundensis 1619313 species 4481256 7 6 1.04E-10 Spongiibacter sp. IMCC21906 1620392 species 3481669 10 8 0 Hoeflea sp. IMCC20628 1620421 species 5119813 10 8 0 Inhangapi virus 1620892 species 12020 2 2 0 Desmodus rotundus endogenous retrovirus 1622024 species 10485 1 1 0 Lutibacter sp. LP1 1622118 species 2966978 150 145 0 Gordonia phage GordDuk1 1622191 species 76276 1 0 0 Gordonia phage GordTnk2 1622192 species 75987 1 0 0 Phietavirus 1623298 genus 0 2 0 0 Phijl1virus 1623300 genus 0 1 0 0 Bacillus sp. LM 4-2 1628753 species 4069266 40 0 0 Geobacillus sp. 12AMOR1 1629723 species 3442724 32 4 1.36E-09 Dermabacter vaginalis 1630135 species 2392314 2 2 0 Acetobacter sp. SLV-7 1633874 species 3106397 15 9 0 Citromicrobium sp. JL477 1634516 species 3258499 14 2 0 Planctomyces sp. SH-PL62 1636152 species 6784659 10 8 0 Proteus phage vB_PmiM_Pm5461 1636250 species 161989 3 3 0 Rotavirus I 1637496 species 17767 24 24 0 Verrucomicrobia bacterium IMCC26134 1637999 species 4001000 3 3 0 Microcystis panniformis FACHB-1757 1638788 leaf 5686839 56 24 0 Enterococcus phage EFLK1 1640885 species 130952 1 1 0 Pseudonocardia sp. HH130629-09 1641402 species 6300975 10 9 0 Microcystis aeruginosa NIES-2549 1641812 leaf 4294213 72 3 0 Petrimonas mucosa 1642646 species 3717632 23 18 0 Lambdina fiscellaria nucleopolyhedrovirus 1642929 species 157977 6 6 0 Devosia sp. H5989 1643450 species 4594249 7 3 0 Kosmotogaceae 1643948 family 2639039 3 0 0 Natrialbales 1644060 order 4403920 5 0 0 Natrialbaceae 1644061 family 4403920 1 0 0 Maribacter sp. 1_2014MBL_MicDiv 1644130 species 4399611 67 52 0 Janthinobacterium sp. 1_2014MBL_MicDiv 1644131 species 6453540 44 29 7.40E-10 Acinetobacter sp. TTH0-4 1646498 species 2962453 44 40 0 Streptococcus phage APCM01 1647391 species 31075 1 1 0 Salmonella phage NR01 1647411 species 111325 10 0 0 Anabaena sp. wa102 1647413 species 5782034 332 294 0 Erythrobacter atlanticus 1648404 species 3226359 9 4 0 Bacillus paralicheniformis 1648923 species 4376305 15 3 0 Streptomyces sp. CFMR 7 1649184 species 8307279 64 58 0 Pseudomonas sp. CCOS 191 1649877 species 6012947 10 5 0 Actinobacteria bacterium IMCC26256 1650658 species 2461858 10 10 0 Halobacteriovorax 1652133 genus 3437906 1 0 0 Corynebacterium sp. JZ16 1652495 species 3217288 9 9 0 Arthrobacter sp. YC-RL1 1652545 species 4018639 24 4 0 Caldimicrobium thiodismutans 1653476 species 1814952 34 30 0 Rhodococcus sp. PBTS 1 1653478 species 4251687 2 2 0 Rhodococcus sp. PBTS 2 1653479 species 5316948 45 19 9.16E-15 Alloactinosynnema sp. L-07 1653480 species 7405112 14 11 0 La Jolla virus 1654357 species 9786 17 17 0 Salmonella phage 19 1654883 species 94766 3 3 0 Pseudoalteromonas phage H101 1654919 species 131903 3 3 0 Escherichia phage HY03 1654926 species 170770 1 0 0 Klebsiella phage PKO111 1654928 species 168758 1 1 0 Escherichia phage APCEc01 1655305 species 168771 1 0 0 Microviridae Fen4707_41 1655654 species 4552 1 1 0 Microviridae Fen7786_21 1655658 species 4686 1 1 0 Mitsuaria sp. 7 1658665 species 6085092 40 19 8.02E-11 Arsenicicoccus sp. oral taxon 190 1658671 species 3525271 4 1 0 Ottowia sp. oral taxon 894 1658672 species 2925783 12 7 1.22E-10 Pseudomonas sp. GR 6-02 1659194 species 6500345 16 8 0 Leptospirillum sp. Group II 'CF-1' 1660083 species 2709324 5 3 0 Sclerotinia sclerotiorum fusarivirus 1 1661062 species 7769 1 1 0 Methylophilus sp. TWE2 1662285 species 3079044 32 20 2.19E-10 Ostreococcus lucimarinus virus 2 1663208 species 196300 1 1 0 Ostreococcus lucimarinus virus 7 1663209 species 182309 8 1 0 Ostreococcus mediterraneus virus 1 1663210 species 193301 30 0 0 Magnetospirillum sp. XM-1 1663591 species 4992477 17 15 0 Bacillus glycinifermentans 1664069 species 4607442 201 200 0 Achromobacter phage phiAxp-2 1664246 species 62220 2 1 0 Marinobacter sp. CP1 1671721 species 4768422 18 5 0 Citrobacter phage IME-CF2 1673887 species 177688 1 1 0 Labrenzia sp. CP4 1674922 species 6051301 10 7 0 Thermococcus sp. 2319x1 1674923 species 1961221 94 93 0 Perigonia lusca single nucleopolyhedrovirus 1675865 species 132831 1 1 0 Urbanus proteus nucleopolyhedrovirus 1675866 species 105667 1 1 0 Massilia sp. NR 4-1 1678028 species 6361416 68 59 0 Mollivirus sibericum 1678078 species 651523 13 10 0 Pseudomonas phage KPP21 1678082 species 73420 1 1 0 Limnohabitans sp. 63ED37-2 1678128 species 3372992 29 15 6.30E-10 Limnohabitans sp. 103DPR2 1678129 species 2948795 26 23 6.20E-10 Burkholderia sp. HB1 1678678 species 7206167 7 4 0 Candidatus Methylopumilus 1679002 genus 0 6 0 0 Akkermansia glycaniphila 1679444 species 3074078 11 7 2.53E-15 Salmon gill poxvirus 1680908 species 241564 1 1 0 Mycobacterium sp. YC-RL4 1682113 species 6053985 6 6 0 Cronobacter phage PBES 02 1684115 species 149732 1 0 0 Chryseobacterium sp. IHB B 10212 1685010 species 4871648 141 126 0 Lake Sarah-associated circular virus-24 1685751 species 1627 1 1 0 Lake Sarah-associated circular virus-29 1685756 species 4282 2 2 0 Lake Sarah-associated circular virus-7 1685784 species 2304 2 2 0 Pseudonocardia sp. EC080610-09 1688404 species 7131853 28 0 0 Arthrobacter sp. LS16 1690248 species 3851242 33 4 0 Pseudonocardia sp. HH130630-07 1690815 species 6680451 21 17 0 Brevibacillus phage Jenst 1691954 species 126341 6 6 0 Enterobacter sp. FY-07 1692238 species 5138701 16 13 0 Paenibacillus sp. 32O-W 1695218 species 5375858 14 13 0 Microbacterium sp. CGR1 1696072 species 3634864 30 11 3.52E-10 Bordetella sp. H567 1697043 species 5532470 8 6 0 Oblitimonas alkaliphila 1697053 species 14141857 52 18 0 Scale drop disease virus 1697349 species 124244 9 9 0 Mycobacterium phage Brusacoram 1698358 species 47618 1 0 0 Microcystis aeruginosa NIES-2481 1698524 leaf 4293006 72 3 0 Mycobacterium phage HyRo 1698710 species 153714 2 0 0 Psychrobacter sp. P2G3 1699622 species 3366617 16 5 0 Psychrobacter sp. P11G5 1699624 species 3519144 17 7 0 Streptococcus phage phiARI0923 1701842 species 33477 1 0 0 Citrobacter sp. FDAARGOS_156 1702170 species 4727434 22 13 0 Faecalibaculum rodentium 1702221 species 2542486 19 19 0 Chelatococcus sp. CO-6 1702325 species 5243734 11 8 9.49E-11 Rhizobium sp. N1314 1703961 species 6274511 1 0 0 Rhizobium sp. N731 1703966 species 6274507 1 0 0 Rhizobium sp. N324 1703969 species 6972593 15 5 0 Arthrobacter sp. ERGS1:01 1704044 species 4936686 3 3 0 Candidatus Xiphinematobacter sp. Idaho Grape 1704307 species 915884 14 12 5.18E-10 Candidatus Thioglobus autotrophicus 1705394 species 1512449 19 18 0 Capnocytophaga sp. oral taxon 323 1705617 species 2614527 20 6 0 Cellvibrionales 1706369 order 4781873 1 0 0 Human plasma-associated gemycircularvirus 1707330 species 2272 18 0 0 Massilia sp. WG5 1707785 species 6267305 52 17 1.54E-15 Thermococcus piezophilus 1712654 species 1928800 17 15 0 Turicibacter sp. H121 1712675 species 2622031 39 36 0 Microbacterium sp. No. 7 1714373 species 4827965 31 23 1.28E-15 Klebsiella sp. G5 1715259 species 4702949 208 28 0 Staphylococcus sp. AntiMn-1 1715860 species 2738396 76 47 0 Candidatus Nitrospira inopinata 1715989 species 3295117 7 3 0 Desulfovibrio sp. J2 1716143 species 3966573 16 11 0 Enterococcus phage IME-EFm5 1718158 species 42265 3 3 0 Klebsiella phage vB_KpnM_KB57 1719140 species 142987 2 2 0 Psychrobacter sp. AntiMn-1 1720344 species 3138120 76 48 0 Escherichia phage slur02 1720494 species 167298 2 0 0 Escherichia phage slur07 1720500 species 167124 1 1 0 Escherichia phage slur08 1720501 species 167467 3 2 0 Chryseobacterium sp. IHB B 17019 1721091 species 4077766 151 137 1.56E-10 Rhodococcus sp. 008 1723645 species 7438324 14 10 0 Streptomyces sp. CdTB01 1725411 species 10191567 53 29 0 Algoriphagus sp. M8-2 1727163 species 3882610 119 109 0 Pedobacter sp. PACM 27299 1727164 species 6147290 61 57 0 Methylomonas sp. DH-1 1727196 species 5127407 33 19 6.29E-25 Escherichia phage slur09 1728958 species 111751 5 3 0 Pseudomonas phage VCM 1729937 species 98765 2 2 0 Staphylococcus phage SPbeta-like 1732063 species 127726 2 0 0 Acidianus bottle-shaped virus 2 1732173 species 22613 1 1 0 Hydrogenobaculum phage 1 1732176 species 19351 1 1 0 Sulfolobus monocaudavirus SMV3 1732177 species 64323 1 1 0 Tadarida brasiliensis circovirus 1 1732201 species 1767 1 0 0 Algibacter alginolytica 1736674 species 3994770 97 83 0 Devosia sp. A16 1736675 species 5032994 5 2 0 Tissierellales 1737405 order 1992686 1 0 0 Lactobacillus phage iLp84 1739610 species 39399 1 0 0 Burkholderia sp. Bp5365 1740162 species 7287809 37 4 0 Burkholderia sp. Bp7605 1740163 species 5705688 37 2 4.13E-10 Pseudarthrobacter 1742993 genus 4758095 2 0 0 Gamboa mosquito virus 1746059 species 26315 4 1 0 Shayang spider virus 4 1746062 species 21414 1 1 0 Wuhan aphid virus 2 1746068 species 10890 1 1 0 Enterococcus phage vB_EfaP_IME195 1747288 species 18607 1 1 0 Marinobacter sp. LQ44 1749259 species 4435564 34 27 0 Cnaphalocrocis medinalis granulovirus 1750712 species 111246 1 1 0 Kurthia sp. 11kri321 1750719 species 2964527 88 83 0 Nostoc sp. NIES-3756 1751286 species 6987571 111 104 0 Streptomyces sp. 4F 1751294 species 8047771 19 18 0 Fischerella sp. NIES-3754 1752063 species 5826863 80 78 0 Leptolyngbya sp. NIES-3755 1752064 species 6761657 25 21 0 Bacillus phage BM5 1755679 species 165031 1 1 0 Serinicoccus sp. JLT9 1758689 species 3597394 15 11 0 Caulobacteraceae bacterium OTSz_A_272 1759059 species 3732719 7 7 0 Streptococcus sp. A12 1759399 species 1874337 39 30 0 Flavobacterium sp. LPB0076 1763534 species 3027315 47 39 5.84E-10 Hydrogenophaga sp. LPB0072 1763535 species 4944132 27 9 2.24E-15 Thalassotalea sp. LPB0090 1763536 species 3861670 86 67 0 Paenibacillus sp. LPB0068 1763538 species 4757181 114 110 0 Zerdali virus 1764086 species 6403 1 1 0 Deinococcus actinosclerus 1768108 species 3264334 4 4 0 Paucibacter sp. KCTC 42545 1768242 species 5169161 31 20 0 Microbulbifer sp. CCB-MM1 1769779 species 3864326 13 12 0 Arthrobacter sp. ATCC 21022 1771959 species 4434904 8 8 0 Polaribacter vadi 1774273 species 3809314 125 107 1.75E-15 Bacillus sp. SDLI1 1774743 species 4134042 26 19 0 Bacillus phage Eldridge 1776293 species 165868 14 14 0 Pseudomonas phage vB_PsyM_KIL1 1777065 species 90552 2 2 0 Alteromonas sp. Mac1 1777491 species 4696291 61 0 0 Candidatus Doolittlea endobia 1778262 species 846562 4 1 0 Candidatus Hoaglandella endobia 1778263 species 636713 9 6 0 Candidatus Mikella endobia 1778264 species 352837 4 3 0 Myotis gammaherpesvirus 8 1780507 species 129563 1 1 0 Streptomyces sp. S10(2016) 1783515 species 9083372 20 17 0 Pseudomonas sp. MS586 1785145 species 6247726 20 15 0 Ostreococcus tauri virus OtV5 1785753 species 186713 30 0 0 Gemella sp. oral taxon 928 1785995 species 1769679 41 35 0 Leptotrichia sp. oral taxon 847 1785996 species 2194935 59 50 0 Pseudomonas sp. L10.10 1788301 species 5149788 14 5 3.55E-16 Bat mastadenovirus WIV13 1788435 species 29162 1 1 0 Circovirus-like genome DHCV-2 1788451 species 2854 6 6 0 Acinetobacter sp. BRTC-1 1789224 species 3741098 35 31 0 Wenyingzhuangia fucanilytica 1790137 species 3427057 120 112 3.87E-15 Bacillus phage SP-15 1792032 species 221908 5 5 0 Acinetobacter phage LZ35 1792222 species 44885 1 1 0 Bosea sp. PAMC 26642 1792307 species 5510355 8 6 0 Yangia sp. CCB-MM3 1792508 species 5522061 8 3 0 Stenotrophomonas sp. KCTC 12332 1793721 species 4541594 9 2 0 Burkholderia sp. PAMC 26561 1795043 species 7431919 72 1 0 Microbacterium sp. PAMC 28756 1795053 species 3539061 25 6 1.75E-09 Frondihabitans sp. PAMC 28766 1795630 species 4766863 11 4 0 Variovorax sp. PAMC 28711 1795631 species 4316152 28 12 2.31E-10 Burkholderia sp. PAMC 28687 1795874 species 6881273 76 1 0 Bacteroides sp. I48 1796613 species 4839918 36 28 0 Blautia sp. YL58 1796616 species 5128792 27 26 0 Burkholderia sp. OLGA172 1804984 species 8574890 141 136 0 Bacillus phage Nemo 1805950 species 162375 3 3 0 Bacillus phage NotTheCreek 1805952 species 162151 1 1 0 Bacillus phage Phrodo 1805953 species 164443 1 0 0 Bacillus phage Zuko 1805956 species 163345 3 3 0 Sphingorhabdus sp. M41 1806885 species 3339521 9 4 0 Arthrobacter sp. ZXY-2 1806905 species 5058708 13 13 0 Gammaproteobacteria bacterium TR3.2 1810504 species 3243537 5 3 0 Salmonella phage 118970_sal4 1810705 species 42418 13 0 0 Streptococcus pantholopis 1811193 species 2241302 40 37 0 Enterobacter cloacae complex 'Hoffmann cluster III' 1812934 species 5010638 12 3 0 Enterobacter cloacae complex 'Hoffmann cluster IV' 1812935 species 4899997 46 5 0 Geobacillus sp. JS12 1813182 species 3721489 9 1 0 Brazilian marseillevirus 1813599 species 362276 18 17 0 Shigella sp. PAMC 28760 1813821 species 4558287 26 0 8.79E-18 Streptococcus halotolerans 1814128 species 2182100 51 49 0 Streptococcus virus 9871 1814957 species 32729 1 0 0 Streptococcus virus 9872 1814958 species 33105 2 1 0 Streptococcus virus 9874 1814960 species 32649 1 0 0 Bacillus phage AR9 1815509 species 251042 5 4 0 Lactobacillus phage PLE3 1815510 species 41005 1 0 0 Escherichia phage vB_EcoM-UFV13 1815590 species 165772 1 0 0 Pseudomonas phage phiMK 1815957 species 93129 1 0 0 Colwellia sp. PAMC 20917 1816218 species 4683314 39 28 0 Cronartium ribicola mitovirus 2 1816485 species 2471 5 5 0 Mycobacterium phage Panchino 1821537 species 43516 5 0 0 Mycobacterium phage Phrann 1821541 species 44872 5 0 0 Gordonia phage UmaThurman 1821563 species 50127 1 0 0 Marinobacterium sp. ST58-10 1821621 species 5191608 24 15 2.03E-27 Mycobacterium phage EvilGenius 1821723 species 53935 1 0 0 Mycobacterium phage Shipwreck 1821727 species 48670 1 0 0 Bovine retrovirus CH15 1822365 species 7470 160 160 0 Paraburkholderia 1822464 genus 9291260 53 0 0 Kafue kinda x chacma baboon virus 1823757 species 14924 1 1 0 Desulfuromonas sp. DDH964 1823759 species 3924652 3 3 0 Streptococcus marmotae 1825069 species 2322791 24 15 0 Tokyovirus A1 1826170 species 372707 4 2 0 Bacillus sp. IHB B 7164 1827146 species 5036631 65 8 0 Brevundimonas sp. GW460-12-10-14-LB2 1827469 species 3263775 44 14 9.12E-10 Enterobacter sp. ODB01 1827481 species 4534036 53 34 0 Lachnoclostridium sp. YL32 1834196 species 7225343 67 60 0 Ruminiclostridium sp. KB18 1834198 species 3802817 33 30 0 Parabacteroides sp. YL27 1834200 species 3306456 14 12 0 Burkholderiales bacterium YL45 1834205 species 2923068 37 33 0 Erysipelotrichaceae bacterium I46 1834207 species 4468295 68 65 0 Polynucleobacter duraquae 1835254 species 2026292 23 9 6.14E-10 Bacillus sp. FJAT-14266 1837130 species 4109356 68 3 0 Escherichia phage UFV-AREG1 1837867 species 170788 8 0 0 Gordonia phage KatherineG 1838070 species 52689 1 0 0 Gordonia phage Rosalind 1838077 species 52684 1 0 0 Gordonia phage Soups 1838079 species 52924 1 0 0 Opitutaceae bacterium IG16b 1838286 species 4199284 3 0 0 Streptomyces sp. RTd22 1841249 species 11142275 40 32 0 Acidovorax sp. RAC01 1842533 species 4574859 34 18 4.39E-10 Sinorhizobium sp. RAC02 1842534 species 6626583 4 3 0 Blastomonas sp. RAC04 1842535 species 4403499 19 5 1.09E-10 Agrobacterium sp. RAC06 1842536 species 4964647 22 19 0 Hydrogenophaga sp. RAC07 1842537 species 4674684 15 10 1.33E-10 Bosea sp. RAC05 1842539 species 5620120 11 7 0 Methyloversatilis sp. RAC08 1842540 species 3937190 10 9 1.92E-10 Sphingobium sp. RAC03 1843368 species 4369746 31 24 0 Sporomusaceae 1843490 family 5380816 2 0 0 Exiguobacterium sp. U13-1 1849031 species 3208634 13 8 0 Arthrobacter sp. U41 1849032 species 4792631 9 7 0 Streptomyces sp. SAT1 1849967 species 7472530 9 8 0 Lutibacter sp. LPB0138 1850246 species 3426122 304 213 0 Rhodobacter sp. LPB0142 1850250 species 3780829 6 4 0 Arachidicoccus sp. BS20 1850526 species 3492500 40 32 0 Catopsilia pomona nucleopolyhedrovirus 1850906 species 128058 5 4 0 Murdochiella sp. Marseille-P2341 1852373 species 1671491 9 7 0 Morganella phage vB_MmoM_MP1 1852628 species 163201 9 8 0 Erwinia phage vB_EamP_Frozen 1852641 species 75147 6 0 0 Pseudomonas sp. A3(2016) 1853130 species 6823539 12 9 0 Chitinophagia 1853228 class 7206042 5 0 0 haloarchaeon HTSR1 1855411 species 1972283 5 4 0 Sphingobium sp. EP60837 1855519 species 4261696 11 3 0 Pseudomonas sp. TCU-HL1 1856685 species 6256697 22 15 0 Kayvirus 1857843 genus 140903 1 0 0 Twortvirus 1857846 genus 0 1 0 0 Halothiobacillus sp. LS2 1860122 species 2908964 9 6 0 Shigella phage SHSML-45 1863010 species 108050 4 0 0 Shigella phage SHSML-52-1 1863011 species 169621 1 0 0 Borrelia hermsii HS1 1867252 leaf 1390006 33 5 0 Enterobacter sp. HK169 1868135 species 4551186 60 6 0 Prosthecochloris sp. CIB 2401 1868325 species 2399849 18 18 0 Rhizobium sp. S41 1869170 species 5524367 3 0 0 Enterobacter cloacae complex sp. 35734 1870930 species 5276896 44 1 0 Citrobacter phage vB_CfrM_CfP1 1871313 species 180219 3 0 0 Lactococcus phage 50101 1871681 species 31987 2 2 0 Pteropox virus 1873698 species 133492 3 3 0 Bacillus phage Aurora 1874000 species 25908 2 2 0 Marinobacter sp. Hb8 1874317 species 4121005 58 43 0 Mycobacterium sp. djl-10 1879023 species 6579322 19 17 0 Sea otter parvovirus 1 1882382 species 4639 4 0 0 Erwinia phage vB_EamM_Asesino 1883370 species 246291 1 1 0 Erwinia phage vB_EamM_Phobos 1883377 species 229501 16 15 0 Selenomonas sp. oral taxon 920 1884263 species 2440121 10 9 0 Xincheng anphevirus 1884460 species 12774 1 1 0 Lishi arlivirus 1884461 species 9924 2 2 0 Sparus aurata polyomavirus 1 1885927 species 7299 1 0 0 Gordonia phage JSwag 1887649 species 52726 1 0 0 Gordonia phage Remus 1887652 species 52738 1 0 0 Streptococcus himalayensis 1888195 species 2275471 20 18 0 Wabat virus 1888308 species 12162 1 0 0 Anaerolineaceae bacterium oral taxon 439 1889813 species 2945494 9 8 0 Synechococcales 1890424 order 2745087 4 0 0 Chroococcidiopsidaceae 1890528 family 6689401 3 0 0 Sulfolobus sp. A20 1891280 species 2688317 34 30 0 Mycobacterium phage Tonenili 1891703 species 160985 2 0 0 Mus musculus polyomavirus 2 1891770 species 4754 2 2 0 Coleofasciculaceae 1892251 family 0 3 0 0 Oscillatoriaceae 1892254 family 8595060 2 0 0 Hapalosiphonaceae 1892263 family 0 1 0 0 Bacillus sp. ABP14 1892404 species 5152566 120 11 0 Porphyrobacter sp. LM 6 1896196 species 2979257 4 2 0 Spiroplasma sp. TU-14 1898044 species 1199640 48 46 0 Rosavirus C 1902502 species 9112 2 2 0 Erwiniaceae 1903409 family 1935949 3 0 0 Yersiniaceae 1903411 family 5766663 1 0 0 Simian retrovirus 8 1904439 species 8126 1 0 0 Stenotrophomonas sp. LM091 1904944 species 4317450 7 4 0 Klebsiella sp. LTGPAF-6F 1905288 species 6790399 30 0 0 Pectobacterium parmentieri 1905730 species 5063892 21 16 0 Curtobacterium sp. BH-2-1-1 1905847 species 3795948 7 4 0 Hyphomonas sp. Mor2 1906738 species 3628091 8 7 0 Jeongeupia sp. USM3 1906741 species 3788814 11 7 0 Microbacterium sp. BH3-3-3 1906742 species 3508491 30 9 6.89E-10 Pigeon adenovirus 2 1907767 species 41981 4 4 0 Gilman virus 1911109 leaf 9798 1564 1069 0 Mosquito dicistrovirus 1911442 leaf 9018 2 2 0 Actinomyces sp. VUL4_3 1912795 species 2207832 5 5 0 Cc31virus 1913650 genus 169408 1 0 0 Botrytis cinerea endornavirus 1 1914154 species 11557 1 1 0 1916956 1916956 no rank 2750634 7 5 0 1921421 1921421 no rank 3486308 30 27 0