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update fasta_adapter.txt with new illumina adapter sequences

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1 parent 4a288ad commit 087f7f6d03f62754a4f2eca69e12118c8efe18a7 @wpoehlm wpoehlm committed Mar 21, 2017
Showing with 49 additions and 0 deletions.
  1. +49 −0 task-files/hisat2/fasta_adapter.txt
@@ -128,3 +128,52 @@ CAAGCAGAAGACGGCATACGAGATATTGGCGTGACTGGAGTTCAGACGTGTGCTCTTCCGATC
AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATC
>NEBNEXT_ADAPTER_ILLUMINA
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTCTTTCCCTACACGA
+>PrefixNX/1
+AGATGTGTATAAGAGACAG
+>PrefixNX/2
+AGATGTGTATAAGAGACAG
+>Trans1
+TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG
+>Trans1_rc
+CTGTCTCTTATACACATCTGACGCTGCCGACGA
+>Trans2
+GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG
+>Trans2_rc
+CTGTCTCTTATACACATCTCCGAGCCCACGAGAC>PrefixPE/1
+AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
+>PrefixPE/2
+CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
+>PCR_Primer1
+AATGATACGGCGACCACCGAGATCTACACTCTTTCCCTACACGACGCTCTTCCGATCT
+>PCR_Primer1_rc
+AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGTATCATT
+>PCR_Primer2
+CAAGCAGAAGACGGCATACGAGATCGGTCTCGGCATTCCTGCTGAACCGCTCTTCCGATCT
+>PCR_Primer2_rc
+AGATCGGAAGAGCGGTTCAGCAGGAATGCCGAGACCGATCTCGTATGCCGTCTTCTGCTTG
+>FlowCell1
+TTTTTTTTTTAATGATACGGCGACCACCGAGATCTACAC
+>FlowCell2
+TTTTTTTTTTCAAGCAGAAGACGGCATACGA>TruSeq2_SE
+AGATCGGAAGAGCTCGTATGCCGTCTTCTGCTTG
+>TruSeq2_PE_f
+AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGT
+>TruSeq2_PE_r
+AGATCGGAAGAGCGGTTCAGCAGGAATGCCGAG>PrefixPE/1
+TACACTCTTTCCCTACACGACGCTCTTCCGATCT
+>PrefixPE/2
+GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
+>PE1
+TACACTCTTTCCCTACACGACGCTCTTCCGATCT
+>PE1_rc
+AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA
+>PE2
+GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT
+>PE2_rc
+AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC>PrefixPE/1
+TACACTCTTTCCCTACACGACGCTCTTCCGATCT
+>PrefixPE/2
+GTGACTGGAGTTCAGACGTGTGCTCTTCCGATCT>TruSeq3_IndexedAdapter
+AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC
+>TruSeq3_UniversalAdapter
+AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA

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