/OSG-GEM

History for OSG-GEM/osg-gem.conf.example
Commits on May 4, 2017
  1. @wpoehlm

    Added support for STAR read alignment software

    wpoehlm committed May 4, 2017
    8c88334
Commits on Feb 21, 2017
  1. @wpoehlm

    Added support for single end reads. User may select single or paired … 

    …end reads as input
    wpoehlm committed Feb 21, 2017
    505b81a
Commits on Dec 5, 2016
  1. @wpoehlm

    Update osg-gem.conf.example 

    Lowered default memory request and removed SRA ID as second input(takes hours to download the input data, user's may not want this for quick test runs)
    wpoehlm committed on GitHub Dec 5, 2016
    ea8a846
Commits on Oct 31, 2016
  1. @rynge

    Added option to control memory allocation

    rynge committed Oct 31, 2016
    4ed9117
Commits on Aug 8, 2016
  1. @rynge

    Added support for multiple inputs and a GEM merge at the end. Simplie… 

    …d workflow by removing 3rd dax level (requires Pegasus 4.7)
    rynge committed Aug 8, 2016
    a2194cf
Commits on May 18, 2016
  1. @rynge

    Trimmomatic output in separate files, improved handling of annotation… 

    … file and config checks
    rynge committed May 18, 2016
    3e1f836
Commits on May 11, 2016
  1. @wpoehlm

    Added Test Input Files

    wpoehlm committed May 11, 2016
    bd3fe58
Commits on Apr 22, 2016
  1. @wpoehlm

    fixed hisat2 merging support

    wpoehlm committed Apr 22, 2016
    2f98f34
Commits on Apr 2, 2016
  1. @rynge

    Added conf file and initial support for hisat2

    rynge committed Apr 2, 2016
    6288fc1