[2018-04-09 10:01:44] INFO: Running Flye 2.3.2-release
[2018-04-09 10:01:44] INFO: Assembling reads
[2018-04-09 10:01:44] INFO: Reading sequences
[2018-04-09 10:28:04] INFO: Generating solid k-mer index
[2018-04-09 10:33:42] INFO: Counting kmers (1/2):
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[2018-04-09 10:52:00] INFO: Counting kmers (2/2):
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[2018-04-09 11:35:25] INFO: Filling index table
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[2018-04-09 12:25:55] INFO: Extending reads
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[2018-04-13 07:21:55] INFO: Assembled 7264 draft contigs
[2018-04-13 07:22:19] INFO: Generating contig sequences
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[2018-04-13 10:15:14] INFO: Running Minimap2
[2018-04-13 14:13:17] INFO: Computing consensus
[2018-04-13 15:59:07] INFO: Performing repeat analysis
[2018-04-13 15:59:08] INFO: Reading sequences
[2018-04-13 16:25:15] INFO: Building repeat graph
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[2018-04-15 21:11:28] ERROR: Command '['flye-repeat', '-l', '/lustre/home-lustre/jungh2/ncbi/public/PRJNA306026_Quinoa/Flye_PRJNA306026/Flye_CqT/flye.log', '-t', '14', '-v', '5000', '-g', '/lustre/home-lustre/jungh2/ncbi/public/PRJNA306026_Quinoa/Flye_PRJNA306026/Flye_CqT/1-consensus/consensus.fasta', '/lustre/home-lustre/jungh2/ncbi/public/PRJNA306026_Quinoa/SRR4279763.fasta', '/lustre/home-lustre/jungh2/ncbi/public/PRJNA306026_Quinoa/Flye_PRJNA306026/Flye_CqT/2-repeat', '1572864000', '/work/waterhouse_team/miniconda2/envs/flye/lib/python2.7/site-packages/flye/resource/asm_raw_reads.cfg']' returned non-zero exit status -7

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PBS Job 3026634.pbs
CPU time  : 1440:47:05
Wall time : 155:11:12
Mem usage : 431616988kb