/KymographBuilder

KymographBuilder is Yet Another Kymograph Fiji plugin.
  1. Java 96.0%
  2. Python 3.6%
  3. Shell 0.4%
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README.md

DOI

KymographBuilder

KymographBuilder is Yet Another Kymograph Fiji plugin.

See the ImageJ wiki related page : http://imagej.net/KymographBuilder_:_Yet_Another_Kymograph_Fiji_plugin

Features

  • Build kymograph from single or multiple lines (a polyline).
  • Build kymograph for images with multiple channels.
  • Take into account the width of the line using maximum projection along its thickness.
  • Built from scratch and use the Imagej2 Ecosystem.
  • Fast and easy to use :
    • Draw a line (or a polyline)
    • Launch KymographBuilder
    • You're done.

Install

KymographBuilder is an official Fiji plugin meaning that it ships with your Fiji installation.

You can run the plugin with Plugins ► Kymograph ► KymographBuilder.

Authors

KymographBuilder has been created by Hadrien Mary.

This work started in 2016 at the Gary Brouhard laboratory at the University of McGill.

How to cite

If you use this plugin for your research, don't forget to cite it : DOI

License

MIT. See LICENSE.txt