From 8b4f67f45ef9b38ca4236d2ffbefa98c529b8415 Mon Sep 17 00:00:00 2001 From: fomightez Date: Thu, 2 May 2019 12:57:41 -0400 Subject: [PATCH] add current index.ipynb as placeholder to be shown as spinning up instead of Saying Error 404 --- index.ipynb | 58 +++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 58 insertions(+) create mode 100644 index.ipynb diff --git a/index.ipynb b/index.ipynb new file mode 100644 index 0000000..be67075 --- /dev/null +++ b/index.ipynb @@ -0,0 +1,58 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "# PatMatch-binder\n", + "## PatMatch stand-alone, command line-based software in your browser\n", + "\n", + "Welcome. Select a notebook below to get started.\n", + "\n", + "If in doubt, start with the one at the top and work down.\n", + "\n", + "## Notebooks\n", + "\n", + "- [PatMatch initial demo and introduction](notebooks/PatMatch%20initial%20demo%20and%20introduction.ipynb)\n", + "- [PatMatch with Python basics](notebooks/PatMatch%20with%20Python%20basics.ipynb)\n", + "- [PatMatch with a Genome and Protein + Python](notebooks/PatMatch%20with%20Genome%20and%20Python.ipynb)\n", + "- [PatMatch with more Python](notebooks/PatMatch%20with%20more%20Python.ipynb)\n", + "\n", + "-----\n", + "\n", + "\n", + "## Additional topics\n", + "- [PatMatch nucleic handling flags demystified](notebooks/PatMatch%20nucleic%20handling%20flags%20demystified.ipynb)\n", + "- [Advanced: Sending PatMatch output directly to Python](notebooks/Sending%20PatMatch%20output%20directly%20to%20Python.ipynb)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.6.5" + } + }, + "nbformat": 4, + "nbformat_minor": 2 +}