diff --git a/CHANGELOG.md b/CHANGELOG.md index 13b349f..25d1257 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -10,16 +10,64 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0 - package metadata: added `python3.8` classifier ## [2.0.0] - 2019-08-08 +### Changed +- python library: split class `SubfieldVolumeFile` from `VolumeFile` + +### Added +- python library: class `ashs.IntracranialVolumeFile` +- examples: + - added ASHS + - added comparison FreeSurfer vs. ASHS + +### Fixed +* install: no longer require runtime dependencies to run `setup.py` ## [1.0.0] - 2019-05-05 +### Changed +- console entry point `freesurfer-volume-reader`: + - exit with code `EX_NOINPUT`/`66` in case no matching volume files were found + (previously: exception with exit code `1`) + - renamed param `--filename-regex` to `--freesurfer-hipposf-filename-regex` +- python library: + - renamed `read_hippocampal_volume_file_dataframe()` + to `freesurfer.HippocampalSubfieldsVolumeFile.read_volumes_dataframe()` + - renamed `read_hippocampal_volumes_mm3()` + to `freesurfer.HippocampalSubfieldsVolumeFile.read_volumes_mm3()` + - renamed `parse_hippocampal_volume_file_path()` + to `freesurfer.HippocampalSubfieldsVolumeFile.__init__()` + - renamed `find_hippocampal_volume_files()` + to `freesurfer.FreesurferHippocampalVolumeFile.find()` + +### Added +- console entry point `freesurfer-volume-reader`: + - flag `--version` to show version + - param `--source-types` to optionally enable collection of ASHS `*volumes.txt` files + (default: freesurfer only) + - param `--ashs-filename-regex` +- python library: added class `ashs.HippocampalSubfieldsVolumeFile` + to find & read ASHS *volumes.txt files ## [0.2.1] - 2019-04-28 +### Fixed +- added pandas version constraint (required for `pandas.DataFrame.drop`) ## [0.2.0] - 2019-04-28 +### Added +- accept multiple args for positional param `root_dir_paths` + +### Fixed +- invalid root path when `$SUBJECTS_DIR` is set and root dir path is provided as positional arg ## [0.1.1] - 2019-04-27 +### Fixed +- test `read_hippocampal_volume_file_dataframe` on python3.5 ## [0.1.0] - 2019-04-26 +### Added +- script `freesurfer-volume-reader`: + - recursively collect Freesurfer's hippocampal subfield volume files + - output in CSV-format +- python module `freesurfer_volume_reader` [Unreleased]: https://github.com/fphammerle/freesurfer-volume-reader/compare/2.0.0...HEAD [2.0.0]: https://github.com/fphammerle/freesurfer-volume-reader/compare/1.0.0...2.0.0