omicwas

Cell-Type-Specific Disease Association Testing in Bulk Omics Experiments

Installation in R

In order to install the most recent version:

install.packages("devtools")
devtools::install_github("fumi-github/omicwas", build_vignettes = TRUE)

To install from CRAN archive (possibly a version older than github):

install.packages("omicwas")

To uninstall package:

remove.packages("omicwas")

Usage

library(omicwas)
vignette("intro", package = "omicwas")

Information

Please cite

Takeuchi, F., Kato, N. Nonlinear ridge regression improves cell-type-specific differential expression analysis. BMC Bioinformatics 22, 141 (2021)