@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

  • Our VM/Docker sharing infrastructure and management component

    Java 52 16 Apache-2.0 2 issues need help Updated Jul 16, 2018
  • Python 25 12 Apache-2.0 Updated Jul 15, 2018
  • A repository for the schemas used for the data object service.

    Python 10 13 Apache-2.0 6 issues need help Updated Jul 13, 2018
  • 3 3 Apache-2.0 Updated Jul 10, 2018
  • APIs for discovering genomics tools, their metadata and their containers

    15 8 Apache-2.0 Updated Jul 5, 2018
  • GitHub repository for tracking the progress of specification approval

    Updated Jul 5, 2018
  • Repository for the Google Summer of Code for the Reference Retrieval API

    Python 4 1 Apache-2.0 Updated Jul 5, 2018
  • Makefile 27 13 Apache-2.0 Updated Jun 5, 2018
  • A collection of different projects supporting the dockstore initiative

    Java 1 Apache-2.0 Updated May 16, 2018
  • Reference implementation for VMC; see https://github.com/ga4gh/vmc

    Jupyter Notebook 5 2 Updated May 1, 2018
  • developing shared terminology and specifications for exchanging sequence variation

    Makefile 10 3 Apache-2.0 1 issue needs help Updated Apr 30, 2018
  • Used to validate APIs that implement https://github.com/ga4gh/tool-registry-schemas

    Python 3 1 Updated Apr 20, 2018
  • 2 2 Apache-2.0 Updated Apr 19, 2018
  • Homepage for the Large Scale Genomics Work Stream

    Updated Apr 13, 2018
  • Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 64 12 Apache-2.0 Updated Feb 23, 2018
  • compliance Archived

    Compliance test suite for the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Java 10 29 Apache-2.0 Updated Jan 24, 2018
  • ga4gh-server Archived

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 96 99 Apache-2.0 3 issues need help Updated Jan 24, 2018
  • ga4gh-schemas Archived

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 218 119 Apache-2.0 Updated Jan 24, 2018
  • Documentation for the MatchmakerExchange APIs

    HTML 23 12 1 issue needs help Updated Nov 21, 2017
  • 9 3 Apache-2.0 Updated Oct 26, 2017
  • dockstore-ui Archived

    AngularJS UI for the Dockstore Web Service superceded by https://github.com/dockstore/dockstore-ui2

    JavaScript 8 11 Apache-2.0 Updated Oct 10, 2017
  • a place for GA4GH-related wiki pages

    4 Apache-2.0 Updated Aug 3, 2017
  • Client implementation for accessing GA4GH APIs

    Python 8 12 Apache-2.0 Updated Mar 29, 2017
  • Python 1 Apache-2.0 Updated Mar 28, 2017
  • common modules for GA4GH schemas, client and server, collected into one package

    Python 3 6 Apache-2.0 Updated Mar 14, 2017
  • Clojure 3 1 Updated Nov 3, 2016
  • Go 7 7 Updated Oct 21, 2016
  • Repository to track DWG hackathon 2016 projects

    3 Updated Oct 13, 2016
  • C-based library for manipulating HGVS-formatted variants

    C 2 Updated Sep 8, 2016
  • GA4GH Software Security Implementation Guide

    2 1 Apache-2.0 Updated Jul 1, 2016