GitHub is home to over 50 million developers working together. Join them to grow your own development teams, manage permissions, and collaborate on projects.
Reference server implementation for the GA4GH HTSget API standard.
Official code repository for GATK versions 4 and up
Package for building OpenAPI schema docs and UI for gh-pages
A repository for the schemas used for the Data Repository Service.
Schedule the processing of ENA sequences and upload to S3 public dataset
The WES API is a standard way to run and manage portable workflows.
Extensible specification for representing and uniquely identifying biological sequence variation
Implementation registry service for cataloguing implementations of GA4GH standards
Homepage for the Large Scale Genomics Work Stream
TASC aids the harmonisation of aspects of GA4GH's various products that would otherwise prevent different products from being used together conveniently.
GA4GH Variation Representation Python Implementation
AWS serverless implementation of the refget service
An information model for representing variant annotations.
Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
APIs for discovering genomics tools, their metadata and their containers
Used to validate APIs that implement https://github.com/ga4gh/tool-registry-schemas
Forwarding links and rewrite rules for w3id.org
Compliance testing for htsget deployments
GitHub repository for tracking the progress of specification approval
Documentation for the MatchmakerExchange APIs
Manage Cloud interoperability test plugins and schedules through web interface
A schema for describing GA4GH Standards
Repository for the Google Summer of Code for the Reference Retrieval API
Retrieve omics data and metadata from DRS-compliant web services
Interoperable execution of workflows using GA4GH APIs