index.md

title	url	scope	platforms	summary	image	comments	user_support	quotas	citations	pub_libraries	sponsors
Single Cell Omics workbench	https://singlecell.usegalaxy.eu/	domain	platform_group platform_url platform_text platform_location public-server https://singlecell.usegalaxy.eu/ Single Cell Workbench Server DE	The Single Cell Omics workbench is a comprehensive set of analysis tools and consolidated workflows	/use/singlecell/logo_single_cell.svg	The current implementation comprises more than 20 bioinformatics tools dedicated to different research areas of single cell biology. The public server is hosted by the UesGalaxy.eu team.	[UseGalaxy.eu Gitter Support Channel](https://gitter.im/usegalaxy-eu/Lobby) [Galaxy Help Forum](https://help.galaxyproject.org/)	Registered users' data (i.e. datasets, histories) will be available as long as they are not deleted by the user. Once marked as deleted the datasets will be permanently removed within 14 days. If the user *purges* the dataset in the Galaxy, it will be removed immediately, permanently. An extended quota can be [requested](https://docs.google.com/forms/d/e/1FAIpQLSf9w2MOS6KOlu9XdhRSDqWnCDkzoVBqHJ3zH_My4p8D8ZgkIQ/viewform) for a limited time period in special cases. Unregistered users' data will only be accessible during one browser session, using a cookie to identify your data. This cookie is not used for any other purposes (e.g. tracking or analytics.) If UseGalaxy.eu service is not accessed for 90 days, those datasets will be permanently deleted.	Tekman, M., Batut, B., Ostrovsky, A., Antoniewski, C., Clements, D., Ramirez, F., Etherington, G. J., Hotz, H.-R., Scholtalbers, J., Manning, J. R., Bellenger, L., Doyle, M. A., Heydarian, M., Huang, N., Soranzo, N., Moreno, P., Papatheodorou, I., Nekrutenko, A., Taylor, J., … Grüning, B. (2020). [A single-cell RNA-seq Training and Analysis Suite using the Galaxy Framework](https://doi.org/10.1101/2020.06.06.137570). *BioRxiv*, 2020.06.06.137570. https://doi.org/10.1101/2020.06.06.137570	SingleCell	This service is a joint project between different groups from the [Earlham Institute](http://www.earlham.ac.uk/), the [EMBL-EBI](https://www.ebi.ac.uk/), [EMBL](https://gbcs.embl.de/), the [Sorbonne University](http://artbio.fr/), [Peter MacCallum Cancer Centre](https://www.petermac.org/) and the [University of Freiburg](https://galaxyproject.eu/freiburg/). The server is part of the European Galaxy server and is maintained by the [RNA Bioinformatics Center (RBC)](https://www.denbi.de/network/rna-bioinformatics-center-rbc) as part of [de.NBI](https://www.denbi.de/) and [ELIXIR](http://elixir-europe.org/).