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_cleared_contents folder does not get deleted on clean up #8242

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innovate-invent opened this issue Jun 27, 2019 · 3 comments
Open

_cleared_contents folder does not get deleted on clean up #8242

innovate-invent opened this issue Jun 27, 2019 · 3 comments

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@innovate-invent
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@innovate-invent innovate-invent commented Jun 27, 2019

599fd97 added functionality to preserve the working directory when a job is rescheduled.

This folder is not deleted during job clean up, slowly filling the filesystem.
A side effect is when a jobs criteria is to retry indefinitely, millions of copies of the working directory are made until the server crashes due to a full filesystem.

innovate-invent referenced this issue Aug 6, 2019
moved to a directory underneath the top-level working dir)
@pcm32

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@pcm32 pcm32 commented Oct 22, 2019

I have also recently noticed this in our 19.05 setup. Is there any update on this? Is it safe to delete _cleared_contents? Thanks!

@fgiacomoni

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@fgiacomoni fgiacomoni commented Feb 17, 2020

Hi, any improvement from this thread. I also post on this issue in August (here) with no answer from anybody... On our WorkFlow4Metabolomics instance, this temp folder can be more than 2To...

@mvdbeek

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@mvdbeek mvdbeek commented Feb 17, 2020

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