Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[20.05] Decrease pysam verbosity #10225

Merged

Conversation

mvdbeek
Copy link
Member

@mvdbeek mvdbeek commented Sep 15, 2020

Can be reverted once
pysam-developers/pysam#939 is fixed

@mvdbeek
Copy link
Member Author

mvdbeek commented Sep 15, 2020

Since this only affects bam or cram indexes I have only applied it where we open these files, and not the tools or converters that deal with tabix or other formats.

@mvdbeek mvdbeek changed the title Decrease pysam verbosity [20.05] Decrease pysam verbosity Sep 15, 2020
@natefoo
Copy link
Member

natefoo commented Sep 15, 2020

Maybe worth putting in a comment so we remember why this is set?

@dannon dannon merged commit 38ca129 into galaxyproject:release_20.05 Sep 15, 2020
@mvdbeek mvdbeek added this to the 20.09 milestone Sep 15, 2020
@galaxyproject galaxyproject deleted a comment from galaxybot Sep 15, 2020
@nsoranzo nsoranzo deleted the decrease_pysam_verbository branch September 15, 2020 20:50
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

3 participants