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Add filter_failed_datasets_from_collection.py script #2358

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@chambm
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commented May 13, 2016

Here's a simple but very useful script for salvaging large dataset collections that have some failed files in them.

@nsoranzo

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commented May 13, 2016

@chambm Thanks for sharing! Can you please fix the flake8 errors?

./scripts/api/filter_failed_datasets_from_collection.py:10:1: F401 'bioblend' imported but unused
./scripts/api/filter_failed_datasets_from_collection.py:29:1: W293 blank line contains whitespace
./scripts/api/filter_failed_datasets_from_collection.py:37:1: W293 blank line contains whitespace
./scripts/api/filter_failed_datasets_from_collection.py:41:1: W293 blank line contains whitespace
./scripts/api/filter_failed_datasets_from_collection.py:46:54: E703 statement ends with a semicolon
./scripts/api/filter_failed_datasets_from_collection.py:47:61: E703 statement ends with a semicolon
./scripts/api/filter_failed_datasets_from_collection.py:59:118: W292 no newline at end of file

@galaxybot galaxybot added the triage label May 13, 2016

@galaxybot galaxybot added this to the 16.07 milestone May 13, 2016

@jmchilton

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commented May 14, 2016

Beautiful - thanks so much for the contribution @chambm!

@jmchilton jmchilton merged commit db8afda into galaxyproject:dev May 14, 2016

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