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Docker Testing Fixes (for Jenkins for instance) #3387

merged 2 commits into from Jan 8, 2017


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commented Jan 5, 2017

  • Fix problem with current version of the Dockerfile related to the tool shed pre-population of database.
  • Run tests with a UID corresponding to the user testing Galaxy - running as root was preventing Jenkins from cleaning up after itself.

jmchilton added some commits Jan 5, 2017

Fix tool shed pre-population against current dev.
I don't know how this ever worked to be honest - but these changes make a lot of sense. I think there was another bug somewhere that prevented this bug from exhibiting itself.
Run Galaxy tests in --dockerize mode as UID of tester.
Fixes #1541 and should really help Jenkins clean up after itself.

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commented Jan 6, 2017

@galaxybot test this

@jmchilton jmchilton referenced this pull request Jan 6, 2017


Improve Jenkins Stability #3390

2 of 3 tasks complete

@bgruening bgruening merged commit 5a1caa5 into galaxyproject:dev Jan 8, 2017

4 checks passed

api test Build finished. 244 tests run, 0 skipped, 0 failed.
continuous-integration/travis-ci/pr The Travis CI build passed
framework test Build finished. 133 tests run, 0 skipped, 0 failed.
toolshed test Build finished. 580 tests run, 0 skipped, 0 failed.
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