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Implement shed_test command. #176

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jmchilton opened this Issue May 4, 2015 · 1 comment

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jmchilton commented May 4, 2015

  • Don't test local stuff - test stuff published to shed.
    • Setup an on-the-fly Galaxy instance with planemo.galaxy_config module.
    • Update to actually configure shed artifacts.
    • Use bioblend to install the repository.
    • Run the tests (I think run_tests.sh --installed might be do this).
  • Allow specifying a shed_target.
  • Use .shed.yml to resolve id, etc....
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peterjc commented May 4, 2015

When you say "Don't test local stuff - test stuff published to shed." I assuming this would catch mismatches between local files in the git repository vs the files actually included in the tar-ball which would be published on the Tool Shed (e.g. incomplete manifest information in .shed.yml)?

@jmchilton jmchilton added this to the GCC 2015 milestone May 13, 2015

jmchilton added a commit to jmchilton/galaxy that referenced this issue May 18, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue May 18, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/planemo that referenced this issue May 18, 2015

Implement shed_test command.
The test command tests local copies of files, shed_test resolves repositories, find the latest installed revisions on the shed, installs these revisions in a fresh Galaxy clone, and tests them with ``./run_tests.sh -installed``.

Requires galaxyproject/galaxy#267.

Closes galaxyproject#176.

jmchilton added a commit to jmchilton/planemo that referenced this issue May 18, 2015

Implement ``shed_test`` command.
The test command tests local copies of files, shed_test resolves repositories, find the latest installed revisions on the shed, installs these revisions in a fresh Galaxy clone, and tests them with ``./run_tests.sh -installed``.

Requires galaxyproject/galaxy#267.

Closes galaxyproject#176.

jmchilton added a commit to jmchilton/planemo that referenced this issue May 18, 2015

Implement ``shed_test`` command.
The test command tests local copies of files, shed_test resolves repositories, find the latest installed revisions on the shed, installs these revisions in a fresh Galaxy clone, and tests them with ``./run_tests.sh -installed``.

Requires galaxyproject/galaxy#267.

Closes galaxyproject#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jun 26, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jun 26, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jun 30, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jun 30, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 1, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 1, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 1, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 13, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 15, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 15, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 17, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 20, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 22, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 22, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Jul 24, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 4, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 7, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 11, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 12, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 19, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 20, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 21, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 21, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Aug 22, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Sep 25, 2015

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Feb 24, 2016

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.

jmchilton added a commit to jmchilton/galaxy that referenced this issue Dec 15, 2016

Allow config of shed tool conf used with ``run_tests.sh -installed``.
Set with GALAXY_TEST_SHED_TOOL_CONF.

This is required to implement galaxyproject/planemo#176.
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