| layout |
title |
zenodo_link |
questions |
objectives |
level |
tags |
time_estimation |
key_points |
contributors |
tutorial_hands_on |
Metatranscriptomics analysis using microbiome RNA-seq data |
|
How to analyze metatranscriptomics data? |
What information can be extracted of metatranscriptomics data? |
How to assign taxa and function to the identified sequences? |
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Choose the best approach to analyze metatranscriptomics data |
Understand the functional microbiome characterization using metatranscriptomic results |
Understand where metatranscriptomics fits in 'multi-omic' analysis of microbiomes |
Visualise a community structure |
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Introductory |
|
6H |
Metatranscriptomics data have the same QC profile that RNA-seq data |
A lot of metatranscriptomics sequences are identified as rRNA sequences |
With shotgun data, we can extract information about the studied community structure and also the functions realised by the community |
Metatranscriptomics data analyses are complex and must be careful done, specially when they are done without combination to metagenomics data analyses |
|
pratikdjagtap |
subinamehta |
jraysajulga |
bebatut |
emmaleith |
pravs3683 |
shiltemann |
|
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