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tutorial_hands_on |
16S Microbial Analysis with mothur (extended) |
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What is the effect of normal variation in the gut microbiome on host health? |
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Analyze of 16S rRNA sequencing data using the mothur toolsuite in Galaxy |
Using a mock community to assess the error rate of your sequencing experiment |
Visualize sample diversity using Krona and Phinch |
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6h |
16S rRNA gene sequencing analysis results depend on the many algorithms used and their settings |
Quality control and cleaning of your data is a crucial step in order to obtain optimal results |
Adding a mock community to serve as a control sample can help you asses the error rate of your experimental setup |
We can explore alpha and beta diversities using Krona and Phinch for dynamic visualizations |
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shiltemann |
bebatut |
tnabtaf |
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