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2021-05-01
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tutorial_hands_on
Metatranscriptomics analysis using microbiome RNA-seq data
How to analyze metatranscriptomics data?
What information can be extracted of metatranscriptomics data?
How to assign taxa and function to the identified sequences?
Choose the best approach to analyze metatranscriptomics data
Understand the functional microbiome characterization using metatranscriptomic results
Understand where metatranscriptomics fits in 'multi-omic' analysis of microbiomes
Visualise a community structure
Introductory
metatranscriptomics
6H
Metatranscriptomics data have the same QC profile that RNA-seq data
A lot of metatranscriptomics sequences are identified as rRNA sequences
With shotgun data, we can extract information about the studied community structure and also the functions realised by the community
Metatranscriptomics data analyses are complex and must be careful done, specially when they are done without combination to metagenomics data analyses
pratikdjagtap
subinamehta
jraysajulga
bebatut
emmaleith
pravs3683
shiltemann

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