4 authors 16S metagenomics Nanopore training (#2137)
78fd05d Nov 24, 2020
16S metagenomics Nanopore training (#2137)
* nanopore_16S_training_conflicts_solved

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update: task description Hands-on: porechop

* 16S microbial analysis with nanopore data training
- Hand-on block titles have been fixed
- Some typos fixed

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/data-library.yaml

Fix topic

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/data-library.yaml

Fix summary

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Fix title

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/tutorial.md

Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>

* 16S nanopore training update: intro and Kraken2 information

* 16S nanopore training update: intro and Kraken2 information 02

* 16S nanopore workflow coflict fixed

* 16S nanopore workflow coflict fixed

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/workflows/main_workflow.ga

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* 16S Nanopore workflow file updated - tags included

* Update topics/metagenomics/tutorials/nanopore-16S-metagenomics/workflows/main_workflow.ga

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>

* Update data-library.yaml

* 16S Nanopore tutorial.md updated - FASTQ link fixed

* 16S Nanopore training - images optimized

Co-authored-by: Beatriz Serrano-Solano <beatrizserrano@users.noreply.github.com>
Co-authored-by: Willem <40759303+willemdek11@users.noreply.github.com>
Co-authored-by: Björn Grüning <bjoern@gruenings.eu>
78fd05d