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Merge pull request #45 from chapmanb/cytoband-dataframe

hg38 plots: data frame fix for cytoband
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gavinha committed Nov 15, 2018
2 parents 8d0c38d + 5e029de commit 7c1a0e7ff478da9171e763eef7c3f5f0224c4d93
Showing with 1 addition and 0 deletions.
  1. +1 −0 scripts/R_scripts/titanCNA.R
@@ -294,6 +294,7 @@ if (genomeBuild == "hg38" && file.exists(cytobandFile)){
names(cytoband) <- c("chrom", "start", "end", "name", "gieStain")
cytoband <- cytoband[chrom %in% chrs]
cytoband$chrom <- setGenomeStyle(cytoband$chrom, genomeStyle = genomeStyle)
cytoband <- as.data.frame(cytoband)
}
for (chr in unique(results$Chr)){
chrStr <- chr

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